Mlon021586.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- -
- Assembly
- GCA_963576905.1
- Location
- OY756429.1:11515321-11516717[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-07 7.7e-05 23.6 0.0 1 40 17 57 17 60 0.88 2 2 8.1 3e+03 -0.7 0.1 14 22 141 148 131 150 0.60
Sequence Information
- Coding Sequence
- ATGCCTAGGAAGTATGTGAGAAAAGGAAATTCTGGCAGAGGGGAATGGTCAGAAGACAACTTAAGATGTGCGGTAGAGCTAGTGACCTCGGGAAAAATTTCGAAACGAGAGGCCGAACGTCTGTACAAAGTCCCAGCTAGAACCATTTCAAGGCGAATATTGACAGGAAAAATCACGAAACCTTGTCTTGGACCACAAGCATCTCTTGGTGTGGAAAATGAAAGACGACTTGCGCAATACATTAAACGACTTGGTGCTGCTGGATTTGCACCAAATAGAGAAACAGTTCGATCACTGGCCTATGATTTTGCAGAAAATCTGGGAATACCACATCGGTTTTCgaaggaaaacaaaaaagcTGGCTATCATTGGTTGACTTCGTTTTTGGAACGTAATAAAGATATTTCCATCAGGCAAGCTGAGGGACTTTCTGTGGCGAGGGCACAGGGAATGAACAGAAAGGAGgtagaagatttttttaatattttggagaaACAAATGATTGAAAATAACTTGGTTGATAAAggagaaaatatatttaatatggaCGAAACTGGAATCCAACTAATAAATAAACCTGGCCGCGTACTGGCTGCAAAAGGATCTAAGGACGTCCATGTCCTAACACCAAAAGAAAAAGGCGAGACAGTCTCCCTGATTGCCTGCTGTAATGCTGCAGGATATTTCTTACCACCTGTTGTAATAATGAAAGGGGTCAACAGGAAATCTGAATTTTCTGATGGACTTCCACCTGGATCAGAGGtgtatatgaacaaaaaatctGCCTACATAACCACAGAACTTTTTATAAAGTGGTTTAAGGAACATTTCTTGCCTCGTAAAGCACCAACTGGAAAATCTATATTAATTCTAGACGGGCACTCTTCACATTCAAATTCTATAGAACTCCTAGACCTTGCTCGTGATAATGCTGTTATCATTATATGCTTACCAAGTCATACAACTCAGGCCCTACAACCATTAGATAGAAGTTTTTTTAGGTCcctcaaaatatatttcaacgCAGAAGCCAATTCTTGGATGTTAAGAAATAAGTCCAGAACATTAACTAGATATCAAGTTGGTGATCTAATAGGTCGAGCATGGGGAAAGGCTGCCACAAACGGTAATGCTTTGTCTGGTTTTACAGCCTGTGGAATTTATCCACTAAACCCCAATGCCATTCCTGATCGGAAAATACAGATATTGAGCCAATAG
- Protein Sequence
- MPRKYVRKGNSGRGEWSEDNLRCAVELVTSGKISKREAERLYKVPARTISRRILTGKITKPCLGPQASLGVENERRLAQYIKRLGAAGFAPNRETVRSLAYDFAENLGIPHRFSKENKKAGYHWLTSFLERNKDISIRQAEGLSVARAQGMNRKEVEDFFNILEKQMIENNLVDKGENIFNMDETGIQLINKPGRVLAAKGSKDVHVLTPKEKGETVSLIACCNAAGYFLPPVVIMKGVNRKSEFSDGLPPGSEVYMNKKSAYITTELFIKWFKEHFLPRKAPTGKSILILDGHSSHSNSIELLDLARDNAVIIICLPSHTTQALQPLDRSFFRSLKIYFNAEANSWMLRNKSRTLTRYQVGDLIGRAWGKAATNGNALSGFTACGIYPLNPNAIPDRKIQILSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -