Mlon035410.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mystacides longicornis
Gene Symbol
-
Assembly
GCA_963576905.1
Location
OY756436.1:23645257-23652378[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-08 9.9e-06 26.4 0.0 3 38 16 51 14 54 0.95

Sequence Information

Coding Sequence
ATGCCGCGTAGCAAATCTGGAGTAAAAAGGAAGCCCATATTGAAGGAAGACCTGGAAAGAGCAGTTGAAGCTGTCCTTAACAAGACTTTGACTGTTTATGGTGCTGCAAAGCAATTCGAATTATCGAAAACAACACTCTTAAGGCATATAAAGGTCTTCAAAAATTCAGGTACGACAAATtattcatacaaacaaaataatgatacCAAAAAAGTTTTCAATGAGAAGGAAGAATCAATGTTAGTTCACTATATTCAAAAAGCTGCCCATCTTCATTATGGACTAACACTAAAAGATGTTCGCATATTGGCCTATCAATTTGCCAAAGAGAACGGCAAAAAACATGATCAATCTTGGGAAACCCAAAAAATGGCTGGAAAAAGATGGCTGCAGTGTTTTCGGGCAAGATACCAGCAAGATATTGCGCTCAGGAAGCCGGAAGCGACGAGCTTAGCTCGATCAACATCCTTCAACCGAGTTACTGTTGGTTATTTTTTCGACAATTACAAAAGAgctttaacaaaaaatacaaatataacacCGTTTAACATCTGGAACTGTGACGAGACTGGAGTGTCCACTGTTCATGTCCCTCCAAAAATTTTGGCCACCAAAGGCCTAAAACAAGTTGGCAGTATGACCAGCGGGGAAAGAGGGACGAACGTCACGATGATAGCTGCTGTGAATGCTGGTGGAGGATTTATGCCTCCAATGTTGGTTTTTCccagaaaaaattataaaaatttcatgGTCAAAGGAGCTCCAACAGGAACCGTAGGTGGAGCTAATCCATCAGGTTGGTCCAACGAggatttgtttttcttgttttttcaaCACTTTATAACATACAGCCGAGCAAGTTTGGAAAATCCGACAATTTTATTAATGGATAATCACGAAAGCCACATTTCGGTTCCTGTTATTAAACTAGCTAAAGAAAAAGGTGTACAATTAGTTACATTTCATCCACATACCAGCCACAAAATGCAGCCTTTGGATAGAGGAGTATTTGGACCTTTTAAAACTTATTACAATACAGCAATGAATGAATGGATGACTAGGCCAGGAAATGTAGGAAAACCAGCAACAATTTATGATGTACCTGAACTTATAGGCAAAGCTTTTCCACTGGCATTTACTCCTACAAATATTGCCAATGGGTTTCGGGTGTGCGGTATAGAACCACTAaatgaaaacatattttgtgATAATGAGTTTTTACAATCCCATGTTACGGATCGACCTATGCCAATCTTAAATGATACAGAACCTCAGGCTGGAGTAACAAATTCTGAGAGTGTAGAGTGCCATGAAATCATATCTTCTTCATCTTGTCCAACAATTCCCCAATCACCATGCCATATTGTTAGTCCTGAAGTCATCAGACCATACCCAAAGGCTCAACCCCGTAAACCAAACCGTCAAGGAAGACCCAAGGGAAAATCTTGCATTTTAACAGACACACCAGAAAAGAACCGAATTACAAAAGAGAAAGAAGCAAGGCTGTTGAAGAGGATCAAACCAAAGAAAACTACCAAGacttcaacaaaaaaacaaacaaaaagaaaattgacTTATATCTCTGACACTGATTCAAACGAAGAAAATGAAGatgtattaatatgtgaagAGTCTGAATACGACTGTGAGTCAGTTGAACTGGAAGTGGAAGACTTGGAAGATAATATTGAAAAAGGATCTTTCGTGTTGGTGAAACTTTCTTCCAAGAAGACATCGAAATTTTATGTTGCTCATGTTATTTCCGTTAAAGATGACCGTTTGGAAGTAAAGTATCTTAAAAAAGTCCCAGAAACCCCCTCATCTTTAAAGACATGTCATAGAGATGACCTTGACTTTGACGATTGCTTGAAAGAGAGCATAGACGCTGCCATAGGAGTTGTGGCGAAAGGTATACCGGAAGTTGGCTTAAAACCTCTGGATCCGTTTAAACAAAAAGAGCTGTTTGTAGAATACAAAAGAAATCAGatttTTGGTAGGGCTGGATTGGTTGACTTGGTCGCTTATGGCATTGGAAAGTCGAAAGTGCTGGCTGTCAGGTCAGACTTTACGGACGATGGAATGAAGATGGAAATAGATTTCAAGGCTGAAAAACTCATTGTAAAAGGCTTGATGAAAGGGGAAGGCAGACTCAATGCGCTGGTTCTCAGAGCTGGAGGAAATTTCAACAACACGATGCaCAGCTTTGCCAAATATTTTGCCAACCGATACTGGCCTATAGTGTACGCTGAATTGCTCACAGTGATCGAACAGGTCTGGGAGAGAATAGGCATCAGCTActgcaacaaaatatttctaaaagtgCCCTATGATAAGCTGTTTCCAGTTGGAGGTTTCAAATGA
Protein Sequence
MPRSKSGVKRKPILKEDLERAVEAVLNKTLTVYGAAKQFELSKTTLLRHIKVFKNSGTTNYSYKQNNDTKKVFNEKEESMLVHYIQKAAHLHYGLTLKDVRILAYQFAKENGKKHDQSWETQKMAGKRWLQCFRARYQQDIALRKPEATSLARSTSFNRVTVGYFFDNYKRALTKNTNITPFNIWNCDETGVSTVHVPPKILATKGLKQVGSMTSGERGTNVTMIAAVNAGGGFMPPMLVFPRKNYKNFMVKGAPTGTVGGANPSGWSNEDLFFLFFQHFITYSRASLENPTILLMDNHESHISVPVIKLAKEKGVQLVTFHPHTSHKMQPLDRGVFGPFKTYYNTAMNEWMTRPGNVGKPATIYDVPELIGKAFPLAFTPTNIANGFRVCGIEPLNENIFCDNEFLQSHVTDRPMPILNDTEPQAGVTNSESVECHEIISSSSCPTIPQSPCHIVSPEVIRPYPKAQPRKPNRQGRPKGKSCILTDTPEKNRITKEKEARLLKRIKPKKTTKTSTKKQTKRKLTYISDTDSNEENEDVLICEESEYDCESVELEVEDLEDNIEKGSFVLVKLSSKKTSKFYVAHVISVKDDRLEVKYLKKVPETPSSLKTCHRDDLDFDDCLKESIDAAIGVVAKGIPEVGLKPLDPFKQKELFVEYKRNQIFGRAGLVDLVAYGIGKSKVLAVRSDFTDDGMKMEIDFKAEKLIVKGLMKGEGRLNALVLRAGGNFNNTMHSFAKYFANRYWPIVYAELLTVIEQVWERIGISYCNKIFLKVPYDKLFPVGGFK