Mlon031115.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- -
- Assembly
- GCA_963576905.1
- Location
- OY756434.1:11936507-11937973[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 5.1e-08 33.8 0.0 3 41 17 55 15 57 0.94 2 2 2.7 1e+03 0.8 0.0 22 34 173 185 172 187 0.88
Sequence Information
- Coding Sequence
- ATGCCGTACACATACGAAAGAAAGACGGAAAGAGGACAGTGGGGTCAAGAAAACATGACACGTGCAATTGAAAAGGTTAAAAACGAAGGATACAGCTGCAACAAAGCagcaaatgaatataaaatcCCGGAGGCAACATTGAggaggtatttaaaaaaaaatcctgaagATTTTCCAGTGCATGGGGGGCGTTTTAGGACAACTTTGAACGAGATTCAATGCTTGGAACTTTCACAATACATTCAAGACATAAATGCTAGAACATTTGGTTTAACTAGTATACAATGTCGAAAATTAATATACGAGTACGTTGAAGCTAATAATATGGAACACAGATTcaataaagaattaaaaatggCGGGAGCTGATTGGCTTCGAAATTTCATGAAGAAATACAAATTATCAATGCGTACTCCGGAGGCAACTTCAATAGGAAGACTTATGGGATTCAATAGGACGCAAGTTGATAAATTTTTTGATTTGCTGAAAGATGTTAGAGATAAGTACAAGTTTGAAGCAAGTAGCATTTATAACATTGACGAATCGTCATTATCTACAGTGCCGACTAAACTGCCGAAAGTCATAGCACCCGTGGGCCTAAGAAGAGTCTCAAAAATAGTCTCCGCAGAAAGAGGAAAGTCAGTTACTGTAGTATGTGGAATGAATGCTGCAGGAGGGTACATTAgtccatttttaatttttccaagAGTTAGGATGCTTCCTGAACTTTTGAAAGGAACACCATTCGGAACCCAAGCTGTTTGTCAACAAACTGGTTGGATGACATCTGAGGTGTTCATCTTATATTTGCaacatttttcgaaatgttCAAAGTCATCAAAAGAATCGCCAGTGTTGCTTCTTCTCGATAATCATGCGTCGCATGTTTCATTAGCAGCCATAAGCTTTTGTAGAGAAAATGGGATTATAATGTTAGGATTTCCTCCACACACAACTCATAGGTTACAGCCGTTAGACGTGGCATTTTTTGGACCCTTAAAAAAGTTATATAATCAATACAGTGACGATTTTATGGTTTCAAATCCAGGGAAAACCATAACAGATAAGAATCTTGGGGAACTTTTCGGTAAGGCCTATTACAAATGTGCGTCTATTGGGATAGCAGTGAACGGCTTCAAGGCTTGTGGCATAGAACCATACGACAGAAACATTTTCAGTGATGTCGACTATGCATCAGCCGAAGTCACAGATATTCCTCTTGCAGAAAGTAGGGAATTTGAAGAATCTATGCTATCACCGAATGACATCGAACCAATCATTGATTCAGGGTCAAATATACTTCAAACGAACAGTAAGCCAGGACCAAGtgggcttaaaaaaaaacagtgtaaCACCGCAACAAATAAAGCCATTACCGAAAGCAAATATTACAACAAGAAGGGTCACAAAgagaaagaaaatgaaaaaatagaaaaagatggaaaaataatattgaaatttgactaa
- Protein Sequence
- MPYTYERKTERGQWGQENMTRAIEKVKNEGYSCNKAANEYKIPEATLRRYLKKNPEDFPVHGGRFRTTLNEIQCLELSQYIQDINARTFGLTSIQCRKLIYEYVEANNMEHRFNKELKMAGADWLRNFMKKYKLSMRTPEATSIGRLMGFNRTQVDKFFDLLKDVRDKYKFEASSIYNIDESSLSTVPTKLPKVIAPVGLRRVSKIVSAERGKSVTVVCGMNAAGGYISPFLIFPRVRMLPELLKGTPFGTQAVCQQTGWMTSEVFILYLQHFSKCSKSSKESPVLLLLDNHASHVSLAAISFCRENGIIMLGFPPHTTHRLQPLDVAFFGPLKKLYNQYSDDFMVSNPGKTITDKNLGELFGKAYYKCASIGIAVNGFKACGIEPYDRNIFSDVDYASAEVTDIPLAESREFEESMLSPNDIEPIIDSGSNILQTNSKPGPSGLKKKQCNTATNKAITESKYYNKKGHKEKENEKIEKDGKIILKFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -