Mlon026292.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- -
- Assembly
- GCA_963576905.1
- Location
- OY756431.1:23640740-23645889[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-10 1.1e-07 32.7 0.0 4 39 190 226 187 230 0.90 2 4 4.7e-12 1.7e-09 38.4 0.1 1 39 241 279 241 282 0.94 3 4 1.2e-15 4.5e-13 49.9 0.0 2 45 297 341 296 341 0.97 4 4 3.1e-16 1.2e-13 51.8 0.0 2 43 349 391 348 392 0.94
Sequence Information
- Coding Sequence
- ATGACTGGTCATCCAGATTCTTTGCCACAATCTCCAGATGTGGATGTGCGGAGTGCTGGTGAAGGAGGAGTTCCTTCAGATCCTGGAGAATCTACTCATTTAAATGGATCTTATTTACAGCAGCACTTACAGACAAATATAGATAATGATTCAATTAACTGCATGGATCCTGACTATGCATTATCAGTTCCCATGGCTCCAGTAGCAACGCCAGTGTCAGACGCTTCGGACATTCCATTATCGTTGCAATCGGACGGAGATAATAATTCATCAAGCACTAGAATAAAGTTGGAGCCATTGCATTCCCTAGATCATCAAGTTACATTGGATATGGACATACATATGAATCAGTTACATGGAAGACATGTACATGACAGTCATTCTTCCATTATATCTGAGTCACTCAAAATTTTACCTGGAGATCACCATGTAAACAATGATATTTGTGAAGACAAAGGTAATTTGAGTAACGAGCACTCGCAGGATGAGTGTCCTCAGTCTCAAGGGATGTTGGATTACAGTGGTCTCCATATGATGGCAAATATCCCCAAAACATGGTCCCAGCAGGATATGGAGAATGCCTTGGATGCTCTCAGAAATCACAACATGAGTTTGACTAAGGCTTCTGCTATGTATGGCATTCCTTCCACAACTCTTTGGCAAAGAGCACATAGACTAGGAATTGATACACCCAAAAAAGAGGGTCCAACCAAATCATGGACCGAAGGTAATTTGCAGAATGCCCTCCAAGCATTGAGAAGTGGAACCATCTCTGCCAATAAAGCAAGCAAAGCTTATGGAATTCCTAGTAGTACGTTATACAAAATAGCTAGGAGAGAAGGCATCAGATTGGCAGCTCCTTTCAATGCTGCACCAACCACTTGGAGACCAGGAGACCTTGAGAGAGCTCTGCAGTCTATTCGTACCGGACAATCATCTGTTCAGAAGGCATCAACGGAATTCGGCATACCAACTGGAACACTCTATGGGAGATGTAAAAGGGAGGGAATCGAATTATCCAGATCAAACCCCACACCATGGTCGGAAAATGCAATGGGGGAAGCTTTGGAATCTGTCAGAGTTGGCCAAATGTCCATAAATCAAGCAGCGATACATTATAATCTTCCATATTCCTCTTTGTACGGACGCTTCAAAAGATGTAAATATGATACAGACGGAGCTGGAAATGAGATTTCTCCACTTCATCTGCAAGATTCCCAGCAGCACCAGCATAACTCCAACAGCGAGATGAGCCACCCCAGCATGATGTCTCCGGAACACTCCAATCAGGATTGCACGCATGCAATGTACTCttcatattcttcaagtatGCACCCATCCAACGTCCATAATATGGGAGACAACACCTGTATACCTCATAGCAACCAAGACTGCATCACCACAAgttga
- Protein Sequence
- MTGHPDSLPQSPDVDVRSAGEGGVPSDPGESTHLNGSYLQQHLQTNIDNDSINCMDPDYALSVPMAPVATPVSDASDIPLSLQSDGDNNSSSTRIKLEPLHSLDHQVTLDMDIHMNQLHGRHVHDSHSSIISESLKILPGDHHVNNDICEDKGNLSNEHSQDECPQSQGMLDYSGLHMMANIPKTWSQQDMENALDALRNHNMSLTKASAMYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEGNLQNALQALRSGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWRPGDLERALQSIRTGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSENAMGEALESVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYDTDGAGNEISPLHLQDSQQHQHNSNSEMSHPSMMSPEHSNQDCTHAMYSSYSSSMHPSNVHNMGDNTCIPHSNQDCITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -