Moct030269.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294062.1:27238569-27242426[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0019 0.32 12.8 0.9 1 23 57 80 57 80 0.96 2 24 2.2 3.6e+02 3.1 2.5 1 20 86 105 86 109 0.85 3 24 0.005 0.82 11.5 2.4 2 23 122 143 122 143 0.98 4 24 0.00036 0.059 15.1 0.5 1 23 186 208 186 208 0.98 5 24 3.3 5.4e+02 2.6 1.2 1 21 214 234 214 237 0.70 6 24 0.0026 0.43 12.3 2.7 1 23 249 271 249 271 0.96 7 24 0.0019 0.32 12.8 1.8 1 23 314 336 314 336 0.98 8 24 2.8 4.6e+02 2.8 2.1 1 23 342 365 342 365 0.85 9 24 0.0014 0.23 13.2 0.6 1 23 382 404 382 404 0.98 10 24 1.5 2.4e+02 3.7 1.9 1 23 410 432 410 432 0.95 11 24 0.0059 0.96 11.2 0.3 1 23 448 471 448 471 0.97 12 24 0.0006 0.098 14.4 2.9 1 23 477 500 477 500 0.98 13 24 0.23 38 6.2 0.6 1 23 510 533 510 533 0.95 14 24 1.3 2.2e+02 3.8 2.9 1 23 550 572 550 572 0.97 15 24 0.071 12 7.8 2.3 2 23 579 600 578 600 0.97 16 24 0.12 19 7.2 1.5 1 23 623 646 623 646 0.95 17 24 0.001 0.17 13.6 5.2 1 23 652 675 652 675 0.98 18 24 0.0023 0.37 12.5 3.5 1 23 686 709 686 709 0.98 19 24 0.042 6.9 8.6 4.9 1 23 723 745 723 745 0.98 20 24 0.017 2.8 9.8 0.7 1 23 751 773 751 773 0.98 21 24 3.9 6.5e+02 2.3 1.4 2 23 781 803 780 803 0.91 22 24 0.9 1.5e+02 4.4 1.3 1 21 809 831 809 835 0.91 23 24 0.0012 0.2 13.4 0.3 1 23 862 885 862 885 0.94 24 24 0.17 27 6.7 1.8 2 23 891 913 890 913 0.90
Sequence Information
- Coding Sequence
- ATGACGCATATTTTGTTGAATGTTGACGGATATGGGGCCCATATACCCTACCAAGTtgatgacaatttttttttcagatgtacTGTACCAGAAGCAGATCAACACTTTTTGAATCAACCTGGAACATCAGACATAGGTGATTTAACATATAAACGCGAGGCAGAGTTGTACCCTTGCAATTATTGCGACTATGTAGGATCTCATCCAAGGTTATTAtctttacatttaaaaaatcgcCATATTAAATCTGTGGTGTATCAGTGCCCTCATTGTCCATACAATTCTACTATTGCTCGTAGTACAAGGGAACATATACAGTGTAAACATTTGAATGAAGATGACGACAAGCCAATTATCAaaagaaaatgtgaattttgtgaTTATTGCGCTAGCAATGCAACATCGTTGAAAAATCACGTAAATAAACATACAAAAGAAGTAAAACATCAATGTTCTTTTTGTGAATTTAACACGTTGTGGGAGGGATATCTAAAAATGCATATAAGACGCAAACATAGCGATCAAAATCCTGAATCTGGACAGACAGCAAAAGAATATCCATGCCAATATTGTGACTACAAAGCAGCTACTCCCAGCACACTTAAACTTCACACCAACAAGCATACCAGAGAGCAGGAACACCAGTGTCCTTACTGTCCTTACAAAACAGTGTGGACAACTTACATAAAATTGCATATTCAAAACAAGCATTTCAAAGATGTCAAACCTCCATCTGTCAAAGAGCATGCATGTAGTTATTGCGACTACAAAGCCAAAAATTCCACTTTACTCAGGCAACATCTCAATAAGCACACTCGGGAGAAGGTACATCAGTGTCCTCATTGCCCATTCAATACCTTGTGGGTTACATACATGAAACTACATATTAAAAGAAAACATAGTGAAAACAAAGACAACGAAGTTTTGGACAAAAAAGATTTTCAATGTCAATATTGCCCTTATAAAGCTATAAGTTTGAGCCACTTGAAAATACATGAGAATAAACACACTAAAGCGATAGAGTATAAGTGCGATATATGCGACTTTAAGACCACATGGTATGGTTACTTGAAGTTTCATATTAAGAGGAAACATTCCATAAAGTCTGATGTGAAAGAAGAAGACCAGAaggaaaaatcaacatttccaTGCAACTTTTGTTCTTATAAAGCTATAAATCCGAGCACATTAAAAGTCCATCAAAATAAACACACCAgagaaaatatttataattGTCCTCACTGTGAGTTCAAGACAACATGGAGAGCTTACATCAAGAGTCACATCCTAAAACATAATGCCAATAATTTTAAAACGAGAAAGCAAGGTGCTGTTAAATCTTTTCCGTGTCAGTATTGTAGTTATGTAGCCACTCAAATGGGATCATTGAAATTGCATATTAATTCCAAACATACTCGAGAAAACATGCACAAGTGTCCGGAATGCGATTACCAATGTGCAGTTTATGGAAATTTGAGGATGCATATCAGACGTAAACATGGTTTAAAGCCAGATGATGCTGGCAAATATCATTGTAAAGAATGCGACTTCGAGTCTGAGAGTGCAGCGGAAATAAGAACTCACTTGAATGAAAAGCATGATATGAAGATTGAAATTGACGATATTAAGAAAGAAGATGAAAAAGTATACACATGTCAATATTGTTCATATACAACGCTCTATCAACAGGTTATGAAAAAACACATAAATAAACATACAAGACAGAATGTTATTAAATGCCCACACTGTCCCTATTCAACAGTTTGGAATCATTATATGAAAGTTCACATTAAAAGGCACAATGAACCGAAAACTTCAACTGGTAGACAAAGAAGTACCAAACCGAACACAGATCAAAGTAGGTTATTCCCCTGTCAGTACTGTGACCATAGAAGTTTATCTTTCAGTAGTCTAAGGGATCATATAAATTCTGTGCACACTCGTGAAGTGGTTTATAAATGCCCTTACTGTGAACATAAATGTACCTTAAAAGGAAACCTGAAAGGTCATATTCGAAGAAAGCATCCTGCAGAATTTACCGAACAAGAAAAAAGATATCAATGTGAACATTGTGAGTTCAAAACATCCGAAAGAAGAAATCTGAAAATCCACTTGAAAAAAGAGCATAATATAGATGACGCCAAACTGAAAGCGGAAAATGGAGAGTATAAATGTCAATATTGTGAGTACAAAGCAAGAAGTCTTTATACTCTGAAAATACACAGACATAAACATACTAAGGAAAATGCTTATCGTTGCCCACAATGTGAATTTGCTACTAAATGGCCCAACTATCTTAGGAAGCACATAAAACAACACAGTATTGGAAAGAGTAGAGTTTCTTGTTTATATTGTGAATATAAGGGTTGCTCTACGTTCAGATTGAGGAAGCACATAGAAGGTCTGCATAAGGAAGGTGACTTTTATCCATGCCCCAAACAGAACTGTCAGTTCAGAACAATTCACTACACAAGTTTGAGGATGCATTTGAAAGGCAGCATCCATGCATCAAACGTACCTAGATCACACATGAGTGTCAGTCGTAATTTTTCATATAAGTATAAACCTAACGAAGGCAGATACTTTGCATGTGACTATTGTgaatatgcttcgaaaacgCAGGGCAATTTGGATAAACATATAGAAAATAAACATGAGAAAAAGGCAATGAAGTGTGGGTTGTGCAGCTACAGAACACCCTCTAAGAATTACTTGAAAAGGCACTTTACTCTGAAACATTCAGCTCTGAAGAAGGAAGAAGAAAACACAAAAATAGAACCAGAAGAAACTATAACTCATTCCAATGATTCATATGAAATAACTGATAAAATAGATCATAGTgatattcctgatatttctgaaatcgaTGGCAGAGATGAAATATTTCTATCTACGGATTCTACTGTGCCTATGAGTAACGAATGTGATGACGTCTCAGGTATATCTAATCGTTCGAAAAGAAAAAGAAGTTTTGTTCCATATTATGTCGAAGAAAGTGACGATgaggaaaatgaaataatttgtgaagaTTTTCTCGAAGTAGAATTGGGTGTTAATCCAGTAGCAAATGATAAACCAAGTGACGTGGAAATTGATAAGGAACAAGCAGAAGATAACGTGATTGTACCGTCCATAATGGAGACAGTTAAATTACTTCCAATTGAAAATTCGAGTTcaattaatgataataaaaaaggAAGTGAAGATAATGAAGTTTCAAACATCAAAACGGAAATACAAGAGGATTCTAAAAATCCAGCGAAAAATTGTAATTCAAATGAGCTGAATGATCCAGAGAAAGACTTGGAAACACTTGGAACTAAGAAAGATGCCCCCTTGACAAGACTCAATGGAGCAAATAGAACTTCTACTGCAAAACTTGCAACTGTAGGATTCACAAAGAAAAGAGGAAGAATATGTAGAACAAGAAAAATAGttaatgagaaaataaattttcggaaaacaagAAGTAATAACAAGGGAAGTCCAGTTATCACAGTATTGAAACAAAGTGATCAAGAAATCAAAAAAGAACTTGATGTAGAAGGCGAAAATATCATTCTTCTAGGTGAAACGAAGGCTGCTGATTCATCTAGCCATTGCACTAGTTCCCTTGAAAACATTAATTTGGAACTTGTTGAGTCAAATATGGATAACGCGCAAAGTGCAAGTCATATTGATCTAATATCACAGCCCCAATTTCTTGATACGAAGCAAGTAAAACAAACAGACAATGGATCTGATCTGAATTTAAATAGTTCTTCGGAAAAAAAGGACgttatattggaaaattccagTGAAGTTAATgtgatttcaaaaaatgttaatatTGATGATGAAGGAAAggtgacaaaatga
- Protein Sequence
- MTHILLNVDGYGAHIPYQVDDNFFFRCTVPEADQHFLNQPGTSDIGDLTYKREAELYPCNYCDYVGSHPRLLSLHLKNRHIKSVVYQCPHCPYNSTIARSTREHIQCKHLNEDDDKPIIKRKCEFCDYCASNATSLKNHVNKHTKEVKHQCSFCEFNTLWEGYLKMHIRRKHSDQNPESGQTAKEYPCQYCDYKAATPSTLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIQNKHFKDVKPPSVKEHACSYCDYKAKNSTLLRQHLNKHTREKVHQCPHCPFNTLWVTYMKLHIKRKHSENKDNEVLDKKDFQCQYCPYKAISLSHLKIHENKHTKAIEYKCDICDFKTTWYGYLKFHIKRKHSIKSDVKEEDQKEKSTFPCNFCSYKAINPSTLKVHQNKHTRENIYNCPHCEFKTTWRAYIKSHILKHNANNFKTRKQGAVKSFPCQYCSYVATQMGSLKLHINSKHTRENMHKCPECDYQCAVYGNLRMHIRRKHGLKPDDAGKYHCKECDFESESAAEIRTHLNEKHDMKIEIDDIKKEDEKVYTCQYCSYTTLYQQVMKKHINKHTRQNVIKCPHCPYSTVWNHYMKVHIKRHNEPKTSTGRQRSTKPNTDQSRLFPCQYCDHRSLSFSSLRDHINSVHTREVVYKCPYCEHKCTLKGNLKGHIRRKHPAEFTEQEKRYQCEHCEFKTSERRNLKIHLKKEHNIDDAKLKAENGEYKCQYCEYKARSLYTLKIHRHKHTKENAYRCPQCEFATKWPNYLRKHIKQHSIGKSRVSCLYCEYKGCSTFRLRKHIEGLHKEGDFYPCPKQNCQFRTIHYTSLRMHLKGSIHASNVPRSHMSVSRNFSYKYKPNEGRYFACDYCEYASKTQGNLDKHIENKHEKKAMKCGLCSYRTPSKNYLKRHFTLKHSALKKEEENTKIEPEETITHSNDSYEITDKIDHSDIPDISEIDGRDEIFLSTDSTVPMSNECDDVSGISNRSKRKRSFVPYYVEESDDEENEIICEDFLEVELGVNPVANDKPSDVEIDKEQAEDNVIVPSIMETVKLLPIENSSSINDNKKGSEDNEVSNIKTEIQEDSKNPAKNCNSNELNDPEKDLETLGTKKDAPLTRLNGANRTSTAKLATVGFTKKRGRICRTRKIVNEKINFRKTRSNNKGSPVITVLKQSDQEIKKELDVEGENIILLGETKAADSSSHCTSSLENINLELVESNMDNAQSASHIDLISQPQFLDTKQVKQTDNGSDLNLNSSSEKKDVILENSSEVNVISKNVNIDDEGKVTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -