Basic Information

Insect: Myrrha octodecimguttata
Gene Symbol: -
Assembly: GCA_958510865.1
Location: OY294062.1:15361439-15375931[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.1 1.2e+03 1.5 1.0 1 20 260 279 260 281 0.85

2 18 0.61 1e+02 4.9 6.2 1 23 310 333 310 333 0.95

3 18 1.6 2.6e+02 3.6 0.2 6 20 344 358 341 359 0.93

4 18 0.29 48 5.9 0.0 3 23 499 518 497 518 0.97

5 18 0.00015 0.025 16.2 0.6 2 23 522 543 521 543 0.95

6 18 0.16 26 6.7 0.7 3 23 570 590 569 590 0.98

7 18 7.8 1.3e+03 1.4 2.2 1 19 605 623 605 628 0.75

8 18 0.074 12 7.8 0.1 2 23 641 662 641 662 0.96

9 18 8.1e-05 0.013 17.1 4.9 1 23 697 719 697 719 0.98

10 18 0.00099 0.16 13.7 2.8 1 23 735 758 735 758 0.93

11 18 0.00084 0.14 13.9 1.4 1 23 776 799 776 799 0.95

12 18 0.012 2 10.2 0.1 2 23 812 834 811 834 0.92

13 18 0.005 0.82 11.5 0.2 2 23 853 874 852 874 0.92

14 18 0.46 75 5.3 0.1 1 21 901 921 901 924 0.89

15 18 0.0025 0.42 12.4 0.3 2 23 934 955 934 955 0.97

16 18 0.00076 0.13 14.0 0.1 1 23 967 990 967 990 0.95

17 18 7.1e-05 0.012 17.3 2.4 1 23 997 1019 997 1019 0.99

18 18 0.0027 0.45 12.3 6.1 1 23 1032 1055 1032 1056 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.1	1.2e+03	1.5	1.0	1	20	260	279	260	281	0.85
2	18	0.61	1e+02	4.9	6.2	1	23	310	333	310	333	0.95
3	18	1.6	2.6e+02	3.6	0.2	6	20	344	358	341	359	0.93
4	18	0.29	48	5.9	0.0	3	23	499	518	497	518	0.97
5	18	0.00015	0.025	16.2	0.6	2	23	522	543	521	543	0.95
6	18	0.16	26	6.7	0.7	3	23	570	590	569	590	0.98
7	18	7.8	1.3e+03	1.4	2.2	1	19	605	623	605	628	0.75
8	18	0.074	12	7.8	0.1	2	23	641	662	641	662	0.96
9	18	8.1e-05	0.013	17.1	4.9	1	23	697	719	697	719	0.98
10	18	0.00099	0.16	13.7	2.8	1	23	735	758	735	758	0.93
11	18	0.00084	0.14	13.9	1.4	1	23	776	799	776	799	0.95
12	18	0.012	2	10.2	0.1	2	23	812	834	811	834	0.92
13	18	0.005	0.82	11.5	0.2	2	23	853	874	852	874	0.92
14	18	0.46	75	5.3	0.1	1	21	901	921	901	924	0.89
15	18	0.0025	0.42	12.4	0.3	2	23	934	955	934	955	0.97
16	18	0.00076	0.13	14.0	0.1	1	23	967	990	967	990	0.95
17	18	7.1e-05	0.012	17.3	2.4	1	23	997	1019	997	1019	0.99
18	18	0.0027	0.45	12.3	6.1	1	23	1032	1055	1032	1056	0.96

Sequence Information

Coding Sequence: ATGCCTgtgtttgaaaataatatttacgCCTACTGTTGTAGGCTTTGCTTGTCTGATGATAAAGAGACAATGAAGTTAGTGGATCCAGATAACGAGCATCTGTTGACAGAGCAGATCCTGGCTTTCTTATTTATTGATATTGCTGCCAACGATCAACTATCGAAGTTGGTGTGTCACGCATGCATTCGAAGAATTGAGAACTGGAGCGATTTCAAGAGCAGCTGCCAGAGGAATCAGGCAACAATTCAAGATTTAGAAAGCGAACTAACCGGTGAAGATattctacaagtTAAAGAAGAGTATATTGAAGATCATTCTCCATTAGCAATCGATGACATTGAAATAGTCCCTGATCTGACAGTGAAATCAGAGCCAGTGGGGTGTGAAAAGCAGGAAGTACCTTCGGCCAATGGTGAAGACGCTTCAGCTGGATCCTTCGAACAGGAGTTCACATACAAAACTGAATGCAATGAAAAACAAAACGGAGCTGATGGAAATGAAACAGAAGCAGATACAACtgtgaaaaatgaaagaaaatactCTATGCAGAGTAATTCTGAGGCAATACAGTATGCTACCGATTTGAAATTGATTGAGGAATGTGCACCACCTATAGAGATGGAAAATCTTTCGGCTCTTGAAAACAGTTATATCGAGAAATGCAAGGCAATGGTTGATATGTATCGCACTTTGAAATGTGCTTGTCATATGGCAACCCACCCTAATATAAAAGGACTGCTATCGCATCTCAGAACAATGAAGATCGGGTTCCCAGTTTTCACTTGCTATAACTGCATGATAACCTTTAAAGATAGGTCGTCAAGTGGAAAGCATATCTATAAATGTCCAAACAACAATCTTGACACACTGGTAAAACTTTCAAACCTAAACAAAAGGAGTACTCTCAAATCAAGAATATATCAAAATTATAGGTGCAGCAAATGTAGATTCATATACTCGTTCCACGAAGATTTCTGTAAGCATGTTAATGAAGAACATTGCAATGAGATTGCTCCTTATAACTGCTCATGTCAAAAATCATTCGATTCTTTGGAAGACTACAAAGATCATGTCTATTTTTCCTGTATGGTTGAATACTATTGCGACATTTGTAATAGTGCTGTAGGAAGCTTAAAAGAATTTATCAATCACTGTCAACATCAACATGATAACTCTGAAGGTTTTGCTTTGATCCAAAACCACAACTACAAACAGAGAACATCACAAAAATGCGAACCTaaggaaaacaaaaatatattagGGAAGAGAAGGTGTTCAACCTATGACAGAGCATTGAATATTGATCTCATTGATGACGGGGATCAACCCAGTCGAAAAAACTTGAGGACTACCAGAAACCATCCGACATCGTGCCTGCAGAGTGAAATAGTATATTCTGGTCATGACAATATTTTTAGACATTCTATTACTCATCAAGCAGTCAAACAAGAAacaataaaatcaaatgatcCTACAGACTCCTCTTTTTATGGATGTCCTGATTGCCAAATAATGTATAATGCCGCAGACTGGGAATCACATAAATTAACGCATGAGAAGAAAACTTGTTCGGAATGTGGAAAAGTGTTCATATTTCAAACTGAGCTCGAGGAACATCATGGGGTCCATATGAATTCTAAAGGGTACAGAGATCCTAAAACACATTCCTTCGTAAGCACCATGCTTAACCGTCATACTAGTGTGTTATGCAATATATGCAATGCTCTTTGCGAAAATTTGGAGGATCTAGAATCACATAAATTAACACATAAAGATTCCGAGGTGGAAGAAGTAACATTAGAAATGTCCAAATATTCGTGTGTTACATGTAACAAACATTTCCTGACCTTCGGTAAATATAGTGATCATAATGCAAAACTTCATAAAGACATGCAAACAACAACTCAAGCCTATCCAAGGCAGTGCGATGAGTGTGATAAGATTATATCAAGTGGTTCTGCATTTGCAAGTCACAAAGCTATGCATGGAAGGTTGAGAGATGAATGGAACCGGAAGTCTCCTGAATCGGATTCTCCATTGGAAACACCAAAATCAAGAAAATCTTCGAATCAAGAAATGGAGGATTATCACACATGTGACAAATGTTTCAAAGTATTCTCTGATGAGCATGATTTCGAACAGCACATCAAAACGCATGGCACGAGCATGAACAACAGCAGAACATCAAAATCTCCAAAGAAGTTTTCTTGCCATAGGTGCCACTTAACCTTTGACAAAAGCGAAGCCCTCAATAAAcacattgacgaagaacataATGACATACCAGATTTGGCTGAAGAATCCAGTAACAACAAACCTTATATTTTTACCTGTGATAGATGTGTTCGAACTTTTTCGACTAAAGTTGCTCTTATACAACATAAAACAAAACAACATCCTCAAGAGACTGGACCATCTAAAAGAATTGTTACATATTGTAAGTATTGCCAGATTGGATTCGAAACATTGGTAGCTTTGAATGAGCATTTAGCTCAGGCACATGCAAAAATTTCAACACCATCTGAAACTGCCATTGCCAACCAAAACGAGACAGTTCAATGCAGAttgtgtgaaaaaaaattcatttcaaaaacaGCTTTGTATGCTCACGTTGGTTGGCATAAGCGAACAAATAATGAAGGATCCTTGACACCCCCAGCGAGAAAACTTGTACCACAAACTAAATCGAAGACCGGAGAATTTGAATGTCTTACATGCGGTCAGCAGTTACCAAATGAAGTTGCACTGAAAATCCATAACATCGAAAAACATGGTAATATGGCAGCTCTCATAACCCCCAGATGTGAATCATGCAAACAAGAATTCGCAACCCCAATTGAGTATGAAAACCATATGAAACTACATGAAATTGTTGAGAAGCAGGAGGAAAATGCAGCCTACCCTTGTCAGTTTTGCCCAGCTTCATTCAGCAAGGCCGAAACCTTGGAGGCACATAAAAATGAAAGCCACCCTCCTATGCCAACAATATATAAATGTAAATATTGTAAACAACGTTTTGAAAGACAGATAGCATTCAATAATCATGTAAAAGTTCACGAGATGGAAATATCAGTGTTTGGAATTCGTAAGCCCTTTAATTGCTCACGTTGTAAAAAGGGTTTCAATCTtcacaaaaatctgaaaaaacataTTAATTCAGTTCACCATTCACCATATTGA
Protein Sequence: MPVFENNIYAYCCRLCLSDDKETMKLVDPDNEHLLTEQILAFLFIDIAANDQLSKLVCHACIRRIENWSDFKSSCQRNQATIQDLESELTGEDILQVKEEYIEDHSPLAIDDIEIVPDLTVKSEPVGCEKQEVPSANGEDASAGSFEQEFTYKTECNEKQNGADGNETEADTTVKNERKYSMQSNSEAIQYATDLKLIEECAPPIEMENLSALENSYIEKCKAMVDMYRTLKCACHMATHPNIKGLLSHLRTMKIGFPVFTCYNCMITFKDRSSSGKHIYKCPNNNLDTLVKLSNLNKRSTLKSRIYQNYRCSKCRFIYSFHEDFCKHVNEEHCNEIAPYNCSCQKSFDSLEDYKDHVYFSCMVEYYCDICNSAVGSLKEFINHCQHQHDNSEGFALIQNHNYKQRTSQKCEPKENKNILGKRRCSTYDRALNIDLIDDGDQPSRKNLRTTRNHPTSCLQSEIVYSGHDNIFRHSITHQAVKQETIKSNDPTDSSFYGCPDCQIMYNAADWESHKLTHEKKTCSECGKVFIFQTELEEHHGVHMNSKGYRDPKTHSFVSTMLNRHTSVLCNICNALCENLEDLESHKLTHKDSEVEEVTLEMSKYSCVTCNKHFLTFGKYSDHNAKLHKDMQTTTQAYPRQCDECDKIISSGSAFASHKAMHGRLRDEWNRKSPESDSPLETPKSRKSSNQEMEDYHTCDKCFKVFSDEHDFEQHIKTHGTSMNNSRTSKSPKKFSCHRCHLTFDKSEALNKHIDEEHNDIPDLAEESSNNKPYIFTCDRCVRTFSTKVALIQHKTKQHPQETGPSKRIVTYCKYCQIGFETLVALNEHLAQAHAKISTPSETAIANQNETVQCRLCEKKFISKTALYAHVGWHKRTNNEGSLTPPARKLVPQTKSKTGEFECLTCGQQLPNEVALKIHNIEKHGNMAALITPRCESCKQEFATPIEYENHMKLHEIVEKQEENAAYPCQFCPASFSKAETLEAHKNESHPPMPTIYKCKYCKQRFERQIAFNNHVKVHEMEISVFGIRKPFNCSRCKKGFNLHKNLKKHINSVHHSPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -