Moct023207.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294060.1:51751930-51759387[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0069 1.1 11.0 0.3 1 20 259 278 259 283 0.90 2 14 0.11 19 7.2 1.4 3 19 288 304 287 307 0.96 3 14 0.053 8.7 8.2 4.7 1 23 316 338 316 338 0.98 4 14 0.011 1.8 10.4 0.1 3 21 356 374 356 375 0.96 5 14 2.5 4.1e+02 3.0 0.9 2 23 382 403 381 403 0.93 6 14 7.4e-05 0.012 17.2 0.4 3 23 411 431 409 431 0.98 7 14 0.0057 0.94 11.3 0.1 1 23 438 460 438 460 0.95 8 14 1.5e-05 0.0025 19.4 1.4 3 23 475 496 473 496 0.93 9 14 0.0091 1.5 10.6 1.2 1 23 509 532 509 532 0.97 10 14 7.5e-06 0.0012 20.3 0.6 1 23 539 561 539 561 0.98 11 14 1.7e-06 0.00027 22.4 0.3 1 23 567 589 567 589 0.97 12 14 8e-06 0.0013 20.3 6.5 1 23 595 618 595 618 0.97 13 14 1.1e-06 0.00019 22.9 1.4 1 23 624 646 624 646 0.99 14 14 3.1e-05 0.0051 18.4 0.9 1 23 653 675 653 675 0.98
Sequence Information
- Coding Sequence
- ATGAATTCTGTGGAAAATATAAATGACTTCACGAAAATATGCCGCTGCTGCATGGAGACTGCTTGTTATGACCTTTTCAAAACTTATTTTGAGAACGAACCTCTGGCGAAACTTTTATCCATCTGTACAAGTCAAAGAATTTCAAAGAATGACGTGTAtccgaaaaatatatgtcagaATTGCCTGCAGAGTTTGATAGCTGCGTACATATTCAAGGATAAAGTCATTAAAACTCAGCAGGCACTTTCATCTATAGCTAGGATTGTAGACCGAGCAAAGGTAAAAAAGAATGGGAATGTTTCTAGAGACCACACTTACCACCATCATGAAAAACAGACCCGGATGATTGCTCAGGAACTTGGACAGCAAGGATTGTCAGAAATGGGTCATGTAAAAGTGGAGATAGACAACCAGGATGAAGAATATCTAACTCGGGTAGTACAACAAGAAATACAAGATCCAGATGAAGTTGAGTTGAAGTATATCAAACAAAATGGAGATGAAGAAGAGCAGCAGGAATACTGGTTGCAAGAAGTATCCGAGGGTGACGGAAACAATCTCGATTCATCACAAGGAGGGGAGAATTATGATGATGTGAACAATATCCTTCAGAATGTGAAAGTAATAAATCCCATGCAATTCGCTGATGGTACGGCTTATGTTGATGGAGATGCTCAAGAAGGAGGTGAATATGAAACAATAGAGTTTGTTGATGGAGATGGAAACTATATTAATGGATCTGTAATCGAGCATCAAAAACCAAAGGAGAAAATCCACATTTGTCGTGTTTGCAACGAGGGATTTGTGTCATCTAGAGAGCTGAATACTCACGCTGAATATGCCAATCATCCGCAGAGGATCTGTACAACATGCTTCGAATCCTTTCACAGCTACTCGGCGCTGATTAAACACTGTATGGAGACGGAACATCCTCGCCCTCCTATGTTCAAGTGTCCATTTTGTTTCAAGAAATGTGACAACAAACAAATTCTGCAAAGTCACATTAAGAACCACATGAAGACAAGAAATATAAAAGTTACCAAAGATAAAAAGGGTAATTTGGGGTGTCAGGTATGCCGAACAGCTTTTGTTACTGTTTCGGATCTGCGTCAACATTACAAGGACAATACTGAAAGTCATTTAACCTGTCATATTTGTCTGGAAAAACTCGATAATTTGCTGAAACTTGATGATCATCTCAAACAACATGAGAACGAAAAGCCTTTCGGATGCGAAATATGTGGTGCAAGGTTTAACTTGCAGGCTAACTTTGAGCGTCATCTCAAAAAACACACCCAAAGCGAGACACTATATAAATGCCAGTTTTGCTCTAAAGTGTTTGCTGATGAGGCCTTGGCAATAGAACATGAGAAGCTTCATGAAAACATTCATGAGATGGTTGAAGGGAATAGAAACCATCTTTGCACAGAATGTGGAAAAGTTTTCACCTCTGCCGGCTTCTTGAAGAAACACGTTGAACGTTTCCACCTTGGACTGAATTTCAGCAAGGCCCAGCGAATCCCGTTCGAATGTGAACTATGCGGTAAAATACTATCGTGTAAAGCCACCCTGTATAGTCACATGAAAAATGTCCATGAGAAATCCCAAAAGCTGTACACTTGCGAGATCTGTGGTAAGGTCCTGAAAACCAAGACTTCTTTGGAATTACACACCAATTACCACAACGGCAACTGCCCCTTCAAGTGTGGCATCTGCGGTAAGGCCTTCACTAATGCAACAACTCTGAAGAGTCATTCTTTGATACACACCAACGAAAGACCCCACCAGTGTCAGGTGTGTCACAAGACTTTCAAGCAGAAGCCACATTTGACCACTCACATTCTTACTATCCACACAGCACTCAAACTTTTCAAGTGCGACTACTGCGAGAAGACTTTTGCTTTGAAGGGTAATTTATCGCAACATCTGAAGACGCACACTGGTTGCGAATCACCCTATGTTTGTTCCGTTTGTAATAAGGCCTTCTATTTTGCGAGCAGATTGAGGAAACATGAAAAGATACATATGAAACAATAA
- Protein Sequence
- MNSVENINDFTKICRCCMETACYDLFKTYFENEPLAKLLSICTSQRISKNDVYPKNICQNCLQSLIAAYIFKDKVIKTQQALSSIARIVDRAKVKKNGNVSRDHTYHHHEKQTRMIAQELGQQGLSEMGHVKVEIDNQDEEYLTRVVQQEIQDPDEVELKYIKQNGDEEEQQEYWLQEVSEGDGNNLDSSQGGENYDDVNNILQNVKVINPMQFADGTAYVDGDAQEGGEYETIEFVDGDGNYINGSVIEHQKPKEKIHICRVCNEGFVSSRELNTHAEYANHPQRICTTCFESFHSYSALIKHCMETEHPRPPMFKCPFCFKKCDNKQILQSHIKNHMKTRNIKVTKDKKGNLGCQVCRTAFVTVSDLRQHYKDNTESHLTCHICLEKLDNLLKLDDHLKQHENEKPFGCEICGARFNLQANFERHLKKHTQSETLYKCQFCSKVFADEALAIEHEKLHENIHEMVEGNRNHLCTECGKVFTSAGFLKKHVERFHLGLNFSKAQRIPFECELCGKILSCKATLYSHMKNVHEKSQKLYTCEICGKVLKTKTSLELHTNYHNGNCPFKCGICGKAFTNATTLKSHSLIHTNERPHQCQVCHKTFKQKPHLTTHILTIHTALKLFKCDYCEKTFALKGNLSQHLKTHTGCESPYVCSVCNKAFYFASRLRKHEKIHMKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -