Basic Information

Insect: Myrrha octodecimguttata
Gene Symbol: -
Assembly: GCA_958510865.1
Location: OY294057.1:16471038-16504828[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00022 0.037 15.7 1.5 1 23 199 221 199 222 0.96

2 12 0.00018 0.03 16.0 0.1 1 23 226 248 226 248 0.98

3 12 3.8e-07 6.3e-05 24.4 2.9 1 23 254 276 254 276 0.97

4 12 0.00013 0.022 16.4 1.4 3 23 290 310 288 310 0.95

5 12 3.6e-05 0.0059 18.2 0.2 2 23 317 338 316 338 0.97

6 12 1.6e-07 2.6e-05 25.6 2.0 1 23 344 366 344 366 0.98

7 12 3.6e-07 5.9e-05 24.5 0.4 1 23 372 394 372 394 0.99

8 12 2e-06 0.00033 22.2 0.1 1 23 400 422 400 422 0.98

9 12 5.6e-07 9.3e-05 23.9 1.0 1 23 428 450 428 450 0.98

10 12 9.7e-06 0.0016 20.0 4.2 1 23 456 478 456 478 0.98

11 12 3.3e-07 5.3e-05 24.6 0.8 1 23 484 506 484 506 0.97

12 12 0.0014 0.23 13.2 3.3 1 23 513 535 513 535 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00022	0.037	15.7	1.5	1	23	199	221	199	222	0.96
2	12	0.00018	0.03	16.0	0.1	1	23	226	248	226	248	0.98
3	12	3.8e-07	6.3e-05	24.4	2.9	1	23	254	276	254	276	0.97
4	12	0.00013	0.022	16.4	1.4	3	23	290	310	288	310	0.95
5	12	3.6e-05	0.0059	18.2	0.2	2	23	317	338	316	338	0.97
6	12	1.6e-07	2.6e-05	25.6	2.0	1	23	344	366	344	366	0.98
7	12	3.6e-07	5.9e-05	24.5	0.4	1	23	372	394	372	394	0.99
8	12	2e-06	0.00033	22.2	0.1	1	23	400	422	400	422	0.98
9	12	5.6e-07	9.3e-05	23.9	1.0	1	23	428	450	428	450	0.98
10	12	9.7e-06	0.0016	20.0	4.2	1	23	456	478	456	478	0.98
11	12	3.3e-07	5.3e-05	24.6	0.8	1	23	484	506	484	506	0.97
12	12	0.0014	0.23	13.2	3.3	1	23	513	535	513	535	0.98

Sequence Information

Coding Sequence: ATGGATGTAACCGCATATCTTACAACCCCTCTTCAGTTAGATAAGATATGTAGAACCTGCCTTTCTGTTAAGGGAGATATGAGACCCTTGTTTGGGGCATGTTTAGATGAAATGCTTTCGTCCTTCGCTACGATTGAGGTTAAAGAAGGCGATGATTTACCCAATCTTATGTGTGTACAGTGTGTACTGCAATGTAGCCGAGCTTATACTTTCAAACAACTATGTGAGAAGTCCGATAACATTCTACGTCAATATATATCACCAGAATTTCagGCGCAACTAGCTGAAAACTTATCCCAAGAGATTTCCAAAGATGATGTGGAACAATCACAAGAATTACAACAGATCCAAGAAATTCAACATTCTGAAGACCCACAACATTCCCAGGATATACAACAAGAAATTACTTTTTCTGCAAATGATCTATCAAATGTGATAATTGAGGATGGCATAGCTACAAATTTTGTGGCTTACAATGAGGAAGATGGCATAATCCAGGTCATAGCTGCTGACACAGGAGAATTACAAGAAGGACAGGTACAAGTGGAGTTCAAAAATGACGATGAAAGTATTGCCACAAAACCGAAGCTGAAGTATCCATGCTCCAAATGTTCCGAAtcttttcaattgaaaatagaTCTCAAAattcactTGATGACCCACCATTATCTAGTATATATTTGTGAAGTTTGTAAAAAACCTTTTGCTGAAGCGAGAATTCTTAAACGACACATGAAGattcatcttgaaaaaaaaccaCACGAGTGTAGTGAATGTGGCAAGACCTTTGCAGAAAGTTCGAATCTTAACAAGCATAAAAAGAAACACACTGGAGAACTGAGAAACATTGTTGGAAAGCCTCATTTGTGTTCAGTTTGTGGAAGAGCATTCAAATGGGCTTCTAGCTTATCGAAACACATGAAATATCATACAGGGCATAAACTGTTATCATGTGAATATTGTGGCAGGCAATATGTAGAGgCAAGAAGCTTACGTATACATATAAGATCACATACAGGAGAAAGACCATATATATGTGATGTATGTGAGAAAAGTTTTACTCAGCAATGCAATTTGGAGAAGCATCTCAGAGTTCATACTGGTGAAAAGCCGTATACTTGTCCAGTATGCAATAAAGGATTCACTCAATCCGGTTATGTGAGTATTCATATGCGTACTCATACTGGTGAACGGCCTTATGTATGCCAGACTTGTGGAAAGGCCTTTGCTGGTTCAAATACACTAACAATTCATCAGAGAATTCATACAGGCGAAAAGCCATATAGTTGTCAGTATTGTGATAAGGCATTCAATAGACAGGAAACTCTTGTTATCCATACAAGGTCTCATACTGGCGATAAACCTCATGTTTGCGAAGTGTGTCATAGAGGATTCACATCATCAGGACATCTTTCTGGACATATGAGGACACATTCTGGGGAAAAGCCTCATGTTTGTGAAATATGCGGTAAAAAGTTTGCTGCCTCCAGCAGTTTGAAAGTTCATATGAAGAGCCATAACATAGAACAAAAAACCTATCATTGCAAACTGTGCAATAAAAACTTCCAGGGCCTGCAAAATCTACAGGAACATTTATCGAAACACAACCCAGAATGTCAATGGAATCAAGATGATTTGGATAAAATCCAGACTGTCCAAGTTGCTGAGTTGATGTAA
Protein Sequence: MDVTAYLTTPLQLDKICRTCLSVKGDMRPLFGACLDEMLSSFATIEVKEGDDLPNLMCVQCVLQCSRAYTFKQLCEKSDNILRQYISPEFQAQLAENLSQEISKDDVEQSQELQQIQEIQHSEDPQHSQDIQQEITFSANDLSNVIIEDGIATNFVAYNEEDGIIQVIAADTGELQEGQVQVEFKNDDESIATKPKLKYPCSKCSESFQLKIDLKIHLMTHHYLVYICEVCKKPFAEARILKRHMKIHLEKKPHECSECGKTFAESSNLNKHKKKHTGELRNIVGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLSCEYCGRQYVEARSLRIHIRSHTGERPYICDVCEKSFTQQCNLEKHLRVHTGEKPYTCPVCNKGFTQSGYVSIHMRTHTGERPYVCQTCGKAFAGSNTLTIHQRIHTGEKPYSCQYCDKAFNRQETLVIHTRSHTGDKPHVCEVCHRGFTSSGHLSGHMRTHSGEKPHVCEICGKKFAASSSLKVHMKSHNIEQKTYHCKLCNKNFQGLQNLQEHLSKHNPECQWNQDDLDKIQTVQVAELM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130726;
90% Identity: iTF_00130726;
80% Identity: -