Moct035396.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294064.1:6848204-6864795[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 1.7 2.8e+02 3.5 2.9 1 23 166 189 166 189 0.95 2 30 0.0046 0.75 11.6 0.8 1 23 195 218 195 218 0.93 3 30 0.012 1.9 10.3 3.0 1 23 224 247 224 247 0.97 4 30 0.0081 1.3 10.8 1.0 1 23 253 276 253 276 0.95 5 30 0.002 0.33 12.7 0.6 1 23 282 305 282 305 0.97 6 30 0.0012 0.2 13.4 0.5 1 23 311 334 311 334 0.96 7 30 0.00024 0.039 15.6 1.9 1 23 340 363 340 363 0.96 8 30 0.15 25 6.8 0.1 1 23 369 392 369 392 0.96 9 30 0.00019 0.031 16.0 0.7 1 23 400 423 400 423 0.97 10 30 0.00056 0.092 14.5 0.0 1 23 429 452 429 452 0.96 11 30 0.00055 0.091 14.5 0.4 1 23 457 480 457 480 0.96 12 30 0.003 0.5 12.1 0.4 1 23 490 513 490 513 0.95 13 30 0.00019 0.031 15.9 4.3 1 23 519 542 519 542 0.96 14 30 0.00045 0.074 14.7 0.2 1 23 548 571 548 571 0.96 15 30 0.00033 0.054 15.2 0.3 1 23 577 600 577 600 0.94 16 30 1.7 2.8e+02 3.5 2.9 1 23 754 777 754 777 0.95 17 30 0.0046 0.75 11.6 0.8 1 23 783 806 783 806 0.93 18 30 0.012 1.9 10.3 3.0 1 23 812 835 812 835 0.97 19 30 0.0081 1.3 10.8 1.0 1 23 841 864 841 864 0.95 20 30 0.002 0.33 12.7 0.6 1 23 870 893 870 893 0.97 21 30 0.0012 0.2 13.4 0.5 1 23 899 922 899 922 0.96 22 30 0.00024 0.039 15.6 1.9 1 23 928 951 928 951 0.96 23 30 0.15 25 6.8 0.1 1 23 957 980 957 980 0.96 24 30 0.00019 0.031 16.0 0.7 1 23 988 1011 988 1011 0.97 25 30 0.00056 0.092 14.5 0.0 1 23 1017 1040 1017 1040 0.96 26 30 0.00055 0.091 14.5 0.4 1 23 1045 1068 1045 1068 0.96 27 30 0.003 0.5 12.1 0.4 1 23 1078 1101 1078 1101 0.95 28 30 0.00019 0.031 15.9 4.3 1 23 1107 1130 1107 1130 0.96 29 30 0.00045 0.074 14.7 0.2 1 23 1136 1159 1136 1159 0.96 30 30 0.00033 0.054 15.2 0.3 1 23 1165 1188 1165 1188 0.94
Sequence Information
- Coding Sequence
- ATGATGGACATCGACCAGTGCATTGCCATCAAGGAAGAAAAACCTTTTTTGTCTGATTGCACTCTGAGTTTGGAGGATAACATCCAAGGGATAAAGCATGAAGCAGTGGACATGAATACTGGGGAATACCATTCAACTGAAGATAAACAAGATTCAGCTATGAAATTCGAAGTTGTAAAGATTGAAGAACAATTCTTCGATGAAAGGGAAATTAACGATAGAGAAGCATTTTTGAATGAAGCCGTGAATATTCAGGTGAACGATGAAAAAAGTTTCCAACAAACAaatgataatttcaatattcaaaccGAGAATTCAGATGAGGTCAGCAGCTATCATAACCGATTGTATGACAGTACGTCGATGTTCGAAGATAAAATGCAGGATCCTACGGTTGTTGCTCATCCTGAGCATGATAAACATTTGGGTCAACAAAATACAGTAAATAAAAACCACCGCGAACAGTTAAAATCTGCCCAAGGGAATATCCACAGACATCaatgtcatctttgtgaatttTGTGCTGCTTGGAAAGCTCTTCTAAAAAAGCATATTGAATCTGTTcattttaaaaacaaaaaatatcagtgtaaggagtgtgaatatgctacagctATTAAGGGGCATCTAAAAAAGCATACAGATTTGGTTCACATGAATATTCAAAAGCACCAGTGTGACACGTGCGAATATGTGTGCTACAAGGAGGAAACGCTCAAAACTCATATCGAAACTGTTCATTTGAACAACGAAAACCATCAGTGTCGTATATGTAACTTTTCTACAACTACGAAGGTGTTACTCGCAGAACATACCGAATCTATTCATTCCGAAACGGTTAAATATCAGTGTGACAGTTGTGAATATATCTGTTACAGAAAGGAGGATCTAGAAATACATATTGAATCTGTTCACTCGAATACAAAAACATTTAACTGTCACGTATGTAACTTTGCTTCGAATAGAGAGTCGCTTCTAACAGctcatatagaatctgttcacctGAAAATCAGGAAACATCGTTGTGATGAATGTGACTTCGTTACCGGTAGAAAGGACCATCTGAAAAATCACATCGAAATGGTTCATTTGAAcatcaaaaaatatcaatgtGATGAATGCGCATTTGCTACAGCTAAGGAGATGTATCTTAAATTACATATTGAATCTGTCCACTCAAATGTCGAAAGAACCAAACATCAGTGCAATGAATGTGACTATAACTCGGCTAGAAAGAGGGCTCTAAAAGTACATATCGAAACTGTTcacttgaaattaaaaaaatatccgtGTAATGAATGTGAATATACTGCGGGTAGACCTAGTGCTCTAAAAAAGCATATTGACTCtattcacttgaatatcaaacATCAGTGTTTTGAGTGCGACTATGTTACAGCTGCCAAGTCGGCATTGAAAAGGCATATTGAATCGGTTCACTTTGATATAAAAAGAAAccaaaaaagatttcaatgtAATGAATGTGAATACGCTCCAACTAGGCAGACTTATCTGAGACGGCATATTGAGAATGTTCACTTGAAGGTCAGAAAACATAAATGTCATTATTGTGAGTTCACTTTTGCTATGAAGTCCGATCTGAAAACCCACATTGACCGTATTCACttaaaaaccaaaaactttCATTGCGATGAATGTGGATATGGTACGGCTGTTAAGGCCGATCTAAAAAGGCATATAGAGTCTGTTCACCAGAGTATTCCGAGGTATAAGTGTGATGAATGTGGATATGCTGCTAGTAGGAAGAACTATCTGAAAAGTCATGTTGAACAAGTTCACTTGAACACCATTACACACTCAGTCACTCTGAGTTTGGAGGATAACATCCAAGGGATAAAGCATGAAGCAGTGGACATGAATACTGGGGAATACCATTCAACTGAAGATAAACAAGATTCAGCTATGAAATTCGAAGTTGTAAAGATTGAAGAACAATTCTTCGATGAAAGGGAAATTAACGATAGAGAAGCATTTTTGAATGAAGCCGTGAATATTCAGGTGAACGATGAAAAAAGTTTCCAACAAACAaatgataatttcaatattcaaaccGAGAATTCAGATGAGGTCAGCAGCTATCATAACCGATTGTATGACAGTACGTCGATGTTCGAAGATAAAATGCAGGATCCTACGGTTGTTGCTCATCCTGAGCATGATAAACATTTGGGTCAACAAAATACAGTAAATAAAAACCACCGCGAACAGTTAAAATCTGCCCAAGGGAATATCCACAGACATCaatgtcatctttgtgaatttTGTGCTGCTTGGAAAGCTCTTCTAAAAAAGCATATTGAATCTGTTcattttaaaaacaaaaaatatcagtgtaaggagtgtgaatatgctacagctATTAAGGGGCATCTAAAAAAGCATACAGATTTGGTTCACATGAATATTCAAAAGCACCAGTGTGACACGTGCGAATATGTGTGCTACAAGGAGGAAACGCTCAAAACTCATATCGAAACTGTTCATTTGAACAACGAAAACCATCAGTGTCGTATATGTAACTTTTCTACAACTACGAAGGTGTTACTCGCAGAACATACCGAATCTATTCATTCCGAAACGGTTAAATATCAGTGTGACAGTTGTGAATATATCTGTTACAGAAAGGAGGATCTAGAAATACATATTGAATCTGTTCACTCGAATACAAAAACATTTAACTGTCACGTATGTAACTTTGCTTCGAATAGAGAGTCGCTTCTAACAGctcatatagaatctgttcacctGAAAATCAGGAAACATCGTTGTGATGAATGTGACTTCGTTACCGGTAGAAAGGACCATCTGAAAAATCACATCGAAATGGTTCATTTGAAcatcaaaaaatatcaatgtGATGAATGCGCATTTGCTACAGCTAAGGAGATGTATCTTAAATTACATATTGAATCTGTCCACTCAAATGTCGAAAGAACCAAACATCAGTGCAATGAATGTGACTATAACTCGGCTAGAAAGAGGGCTCTAAAAGTACATATCGAAACTGTTcacttgaaattaaaaaaatatccgtGTAATGAATGTGAATATACTGCGGGTAGACCTAGTGCTCTAAAAAAGCATATTGACTCtattcacttgaatatcaaacATCAGTGTTTTGAGTGCGACTATGTTACAGCTGCCAAGTCGGCATTGAAAAGGCATATTGAATCGGTTCACTTTGATATAAAAAGAAAccaaaaaagatttcaatgtAATGAATGTGAATACGCTCCAACTAGGCAGACTTATCTGAGACGGCATATTGAGAATGTTCACTTGAAGGTCAGAAAACATAAATGTCATTATTGTGAGTTCACTTTTGCTATGAAGTCCGATCTGAAAACCCACATTGACCGTATTCACttaaaaaccaaaaactttCATTGCGATGAATGTGGATATGGTACGGCTGTTAAGGCCGATCTAAAAAGGCATATAGAGTCTGTTCACCAGAGTATTCCGAGGTATAAGTGTGATGAATGTGGATATGCTGCTAGTAGGAAGAACTATCTGAAAAGTCATGTTGAACAAGTTCACTTGAACACCATTACACACTCAGTGTAA
- Protein Sequence
- MMDIDQCIAIKEEKPFLSDCTLSLEDNIQGIKHEAVDMNTGEYHSTEDKQDSAMKFEVVKIEEQFFDEREINDREAFLNEAVNIQVNDEKSFQQTNDNFNIQTENSDEVSSYHNRLYDSTSMFEDKMQDPTVVAHPEHDKHLGQQNTVNKNHREQLKSAQGNIHRHQCHLCEFCAAWKALLKKHIESVHFKNKKYQCKECEYATAIKGHLKKHTDLVHMNIQKHQCDTCEYVCYKEETLKTHIETVHLNNENHQCRICNFSTTTKVLLAEHTESIHSETVKYQCDSCEYICYRKEDLEIHIESVHSNTKTFNCHVCNFASNRESLLTAHIESVHLKIRKHRCDECDFVTGRKDHLKNHIEMVHLNIKKYQCDECAFATAKEMYLKLHIESVHSNVERTKHQCNECDYNSARKRALKVHIETVHLKLKKYPCNECEYTAGRPSALKKHIDSIHLNIKHQCFECDYVTAAKSALKRHIESVHFDIKRNQKRFQCNECEYAPTRQTYLRRHIENVHLKVRKHKCHYCEFTFAMKSDLKTHIDRIHLKTKNFHCDECGYGTAVKADLKRHIESVHQSIPRYKCDECGYAASRKNYLKSHVEQVHLNTITHSVTLSLEDNIQGIKHEAVDMNTGEYHSTEDKQDSAMKFEVVKIEEQFFDEREINDREAFLNEAVNIQVNDEKSFQQTNDNFNIQTENSDEVSSYHNRLYDSTSMFEDKMQDPTVVAHPEHDKHLGQQNTVNKNHREQLKSAQGNIHRHQCHLCEFCAAWKALLKKHIESVHFKNKKYQCKECEYATAIKGHLKKHTDLVHMNIQKHQCDTCEYVCYKEETLKTHIETVHLNNENHQCRICNFSTTTKVLLAEHTESIHSETVKYQCDSCEYICYRKEDLEIHIESVHSNTKTFNCHVCNFASNRESLLTAHIESVHLKIRKHRCDECDFVTGRKDHLKNHIEMVHLNIKKYQCDECAFATAKEMYLKLHIESVHSNVERTKHQCNECDYNSARKRALKVHIETVHLKLKKYPCNECEYTAGRPSALKKHIDSIHLNIKHQCFECDYVTAAKSALKRHIESVHFDIKRNQKRFQCNECEYAPTRQTYLRRHIENVHLKVRKHKCHYCEFTFAMKSDLKTHIDRIHLKTKNFHCDECGYGTAVKADLKRHIESVHQSIPRYKCDECGYAASRKNYLKSHVEQVHLNTITHSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -