Moct004228.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294056.1:25874918-25876726[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 2.7e-06 28.2 0.0 2 38 19 55 18 57 0.89
Sequence Information
- Coding Sequence
- ATGGGCAGAACATACAAAAGAAAGTTAGGTTCCAGAACTtacggaaatttcagtgaagaaCAAGTTAATAATGCGTTGCACGACGTATTGGAGAATGGATTATCGCTACGAAAGGCAGCAAAGAAATACAGATTGGCCTACGGAACTTTAAATAACAGGTACCATGGATGTAAGATCAAGAAGAGCGGTGGGCAACCTGTGTTCACGTATGAAGAGGAAATGGTCATTATTAACAGCGTCTTAACTTGTGCAGACTGGGGATATCCACTAAGCGCTATGGATTTAAGAATCTTCGTCAAGAGTTTTTTGGACAAAAGTGGTAGAACCGTATCTCGATTCAACGAGAATATCCCAGGACCTGACTGGTTGAATAACTTGTTAAAAAGGCATCGAGGTGTTGTCGGTAAAAGATTAGCAAGTAATATTAAAAAGAGCCGAGCGGAAGTTTCACCTGATtcgattaaaaaatatttcgaaaacttggGAAAAACCATTGAAAATGTTCCcgctgaaaatattttcaactatgATGAATCTAATGTCTCGGATGATCCTGGAAAGAAAATGTGCATCTACCGAAGGGGAACCAAATATCCTGAAAGAATATGCAATCATTCAAAATCTGCAACTTCGATTATGGTTTGCGGATCCGCCTCAGCTACCCTTCTGCCACCTTACGTCATATATAAGGCAGAAAATTTATGGGACACTTGGACAGAAGATGGTCCCAAGGGCAGCCCATGCTGCGACCAACCATGTTGCTCACTGGGCTCACGATATAATCGGACCTCACACGGCTGGATTGACATGTCAACCTTCAATGATTGGTTTGTCACTTGTTTCTTACCACACGCTAAGcgattggagggaaaaaaagTGTTAATAGGGGACAATCTAGCATCGCACTTCAATCCAGATGTTCTAAgacaatgtgaaaaaaataatattatatttgcaTGCTTGCCATCTAACTCCACTCACATTTGCCAACCTTTGGATGTTGCATTTTTCAGGCCCTTGAAAGAAAGCTGGAGAAAAACACTAACATCCTGGAAGATGCAAAATTCCAAAACTTCTGGcatcccaaaaaatgaattccCTAAGCTGTTGAAGCAGACACTTCAAACCATGGATAAAGTAATACCCAAAAGGCCAGATATAGAAAAAAGTGCCATAAAAAGAAATTTACTTTCTGGTTTCGAGGCCTGTGGCATTTCACCATTCAACCCCAACAGGGTTTTAGAAAAGTTACCACAAGACGCCATTAATGAAAACGAGATAAGGTGCTCTCTTACCAATTTCTTGAAAGATCTTAAAGATCTTAGGTACAGCTCTCACTCAGAACCCCGACGTAGGAGAAAACTGCTCTCAGCAGAACCCGGTCAGAGCGTTTCAGCACCCAAACCCTTTGAAGAGATGAGTGAAGATGATATAAACATCGATTTAGATGACAGTAACAATGATATTGACATCAGTAAAGATGAAGAGGAGGTTGAATACTTCTGTCCTACATTGGAAAACATCACTAAGGGAAAATTCCTTCTGGTGAGATTTTTGTCTGGCAGTAGAAAAAAGACGGAATTTCGCTATGTTTGTATGGTAAAAGAAGTGTTAGAAGGAGAAGAAATCGAAGTTCAAGGACTGAAATCCGCAGAATCGCGAAAGATTTTCAAGATAATTGAACACGACATATCCATGGTTCCCTTCAAGGAAGTGGTGGCTATACTGCCAGATCCGatactcgaaaaaatttctgatagGATTGAAAAGTACCATTTCCGCGGAGAAATCAATATAAaggaatgttga
- Protein Sequence
- MGRTYKRKLGSRTYGNFSEEQVNNALHDVLENGLSLRKAAKKYRLAYGTLNNRYHGCKIKKSGGQPVFTYEEEMVIINSVLTCADWGYPLSAMDLRIFVKSFLDKSGRTVSRFNENIPGPDWLNNLLKRHRGVVGKRLASNIKKSRAEVSPDSIKKYFENLGKTIENVPAENIFNYDESNVSDDPGKKMCIYRRGTKYPERICNHSKSATSIMVCGSASATLLPPYVIYKAENLWDTWTEDGPKGSPCCDQPCCSLGSRYNRTSHGWIDMSTFNDWFVTCFLPHAKRLEGKKVLIGDNLASHFNPDVLRQCEKNNIIFACLPSNSTHICQPLDVAFFRPLKESWRKTLTSWKMQNSKTSGIPKNEFPKLLKQTLQTMDKVIPKRPDIEKSAIKRNLLSGFEACGISPFNPNRVLEKLPQDAINENEIRCSLTNFLKDLKDLRYSSHSEPRRRRKLLSAEPGQSVSAPKPFEEMSEDDINIDLDDSNNDIDISKDEEEVEYFCPTLENITKGKFLLVRFLSGSRKKTEFRYVCMVKEVLEGEEIEVQGLKSAESRKIFKIIEHDISMVPFKEVVAILPDPILEKISDRIEKYHFRGEINIKEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196132; iTF_01023820; iTF_01023790; iTF_01023791; iTF_01023794;
- 90% Identity
- iTF_01023820; iTF_01023791; iTF_01023790; iTF_01023794;
- 80% Identity
- -