Mtes021555.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- -
- Assembly
- GCA_943737955.2
- Location
- OX031316.1:12659846-12663811[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0004 0.052 15.1 0.0 3 23 190 211 189 211 0.94 2 19 6.9 9e+02 1.8 1.0 2 13 232 243 232 254 0.70 3 19 0.042 5.4 8.8 2.1 1 23 261 284 261 284 0.98 4 19 0.0019 0.24 13.0 0.3 1 23 309 332 309 332 0.93 5 19 0.23 29 6.5 0.0 1 23 442 465 442 465 0.92 6 19 7.4 9.6e+02 1.7 0.2 1 11 487 497 487 511 0.82 7 19 1.7 2.1e+02 3.8 1.1 1 12 517 528 517 530 0.88 8 19 0.018 2.3 10.0 0.0 1 23 603 626 603 626 0.97 9 19 1.4 1.8e+02 4.0 6.9 1 23 675 698 675 698 0.97 10 19 0.032 4.2 9.1 0.4 3 23 737 757 736 757 0.97 11 19 0.069 8.9 8.1 0.0 3 23 802 823 800 823 0.92 12 19 1.4 1.8e+02 4.0 0.1 1 16 846 861 846 868 0.89 13 19 0.015 1.9 10.2 0.0 1 21 879 899 879 900 0.93 14 19 0.15 20 7.0 0.2 1 12 962 973 962 981 0.89 15 19 0.0048 0.62 11.7 0.0 1 23 1060 1083 1060 1083 0.97 16 19 8 1e+03 1.6 0.1 3 23 1105 1126 1104 1126 0.84 17 19 0.02 2.6 9.8 6.3 1 23 1132 1155 1132 1155 0.96 18 19 0.0082 1.1 11.0 1.0 2 23 1194 1215 1193 1215 0.96 19 19 0.41 54 5.7 3.5 1 23 1222 1244 1222 1245 0.94
Sequence Information
- Coding Sequence
- ATGTTACGCTCTATTCAGGCTGCGATTTGCGTTGTGCCAATAGATGGACATGGTGACCAAAGTGGGCAGGATTCATTCATCAAAGTTGAGGTGGTAAATGTTAAACCGGAGCCCAATTTTTATGACCAAGAAGAGGCGCAATTGGATACAGCAGATAAAAATGATATATATTACGATATCACTAAAACCGAATATGAAGTGCAGACAATTTATTGGAGTGGAAGTCCGATTAAGAAGAGGGATGGTAAAACTGTTCTTAATGATGtagtaaaagaagaaatagtgaaagtagaaaaagaagaagaagtgatCGAAGAAGGAGATGCGGAGGGAGAAATCGAGGAGGATGCAGATTACAGTGATCTACACGTACTTGAAAGCTTTGTTTTGGAATCAGAGGAGGACGAAGAGGAAGACAATAATGATGAAAGTGGTAACAGTCAAAACCACGATGTAGAGTCTGTAGATCTTGAAATAAGTGATGTCGAAGATACAACACTTAAGAAAAAACCAGACCAATTATTGCAGAAAAAACACCATTTCTTTGAATCCTACTTTATACGTGCGTGTCCGATTTGCGGCACAGATTTTGAGAATTTGTCATCTTGGAAAGCTCACATGGACAACGTACATAACCACAATAAGAGAAAATATTATAGTGCGTATTACAGCTACACTGAGAATGGCAAAGCCAAGTGTAATTCCTGCAACATTATATTCAGTAGCAAATTGCACTCATTAAGGATGCATAGTTTGATGCATCTTCCTAATAGGAACTTTTTTAAGTGCAAACTCTGTTCAGAGACCAAATCGCAACTTTCTTCGATGATAAAACACATTAAGAAGCAGCACCTCGGGCACTTGCAAGAGCAATCAATTAACATACAAACGCAGCATGCGGGCCTTTACAAGCACAAAATTCGCTACGTGTGTCCCGTGTGTGGTGTTAATTTTGCAACAAAGAATTGTTGGAAAGAACATTTAGACCAAGAGCACAAATTCAATTCACTTGGTGGATTGTCATTTGAATTAGTTGACCAGCATAATCCGTCTACAACAAATCACATGAAATATCGTTGCATGACTTGCAAGATGATATACCCTAGCACATCACCCTTTTGTCTCTTATACAATCATGCGTTACAGCATCTTCCTTTTAAGGTTTTCAAATGCAGCTACTGCGACTATGCACACTCTAAAAAGCTGCAAATCATAAAACATGCATGCGAAGCATTCCCAAAAGCTAACCCACAGCTTGCAGGAAAAACACCCAGCAAAACGCAGAAAAATGTTCAAAGAATCCTGGATACAAATGAGACACTATACATCTGTCCTAGTTGCGGTGAACACTTTGAAGAGGTCGCCTTGTGGGCTGTGCACTTGACACGGGCGCATAATTTGGATCAAATGAAGGccttaaatatacaaataacaCTGGCGGAAGATGACAACCTAAAATACAGTTGCTTGATATGCGATAAAGATCTGAGTAAGGCTAACAGCCATAATATTCGAACACACGCCTTCAGACATATGGCCCATAAGATATACAAATGTAAAATCTGCCATTCagcatttaataaaaagcCATGTGGCAACTGTGCAAGTTCATCGGAGTTCGCCGATACCGGTAAATCTAAGAAACACAGCACAAGGGAGAAATGCAAAAAATCTGAATCTGCAATTGATTCTTTTTGCGATTCCCTACAGCTGAAATCGAACAATGTGCAGAACTTGGCGCAAACGAAAATTGCTGTACGTACTGAGAAAACGATTGTCTGGAATCAATACGAAGAGCACATAACTTATGCATGCCCGGAATGCAATCTGCCGCTGGCTAATAACGAGGCCTGGCATGCACACATTAACAGCCGCCATGACTTCTTCTCAGAGAATCAAATGAAAATAGCTCCCATAGCGGGGGTAAAACAAAAGTGGTTGTGCGAGGAGTGTGGCGTCACTGTGCATGGTTGCCTTGTGCATGCACAACGGCACAAACTCGTACATTTGCCATACAGAGCTTTTATTTGCTGTATCTGCCAACACCGCTCAAAAACACAGAATGTGCTGATTCATCACATAAAGCGGCGGCATTTTACGTCCGGTTCATTCAAGTGTATATTCTGCTCCTTGATTTTTGGGACATATTACGAGCGTTTCATACATACAAAAGCAGAGCACTGTGGTGCCGAATGGCCGGATAATATTTGTAGGGTTTGTATGAAATCTTTACAATCACCTTCGTATCTAGCGCAGCATATGAAGTCACATGATTTTGATCAGCAAGCCAAAATATGCCATTCAGCATTTAATATAATGCCAGCTTGCAACTCTAAACAAACTAACGGAGAAAGAGAATGCAGAACCACCGTCAGTGCTGAgagtaaaaatattatatatggtTGTCCCCAATGTGGTGAAGATTTTAGAACTGAGCAGCTATGGGACATTCACATAGTTAAGGAACACGACTTACGTGAGCCGAGaggtttaaatttttcaaaaattagtGATGGTGGTGATGGCATCAGCATCTACAAATGCTCTGTTTGTGATGAACTTGTCAAAACATCTACATCATTGTCCCAAGCTTTGTTTGATCACGCCAGCATTAAACATATGCCTTTCAAAAGCTATAAATGCAGCGCTTGCGGAGAGATGTATACCAGAAAAGATGACATTCTTATTCACGTTAACAATTGCAAAGAAAGTGAAGATTTTAGTAAAAGTTCAGAAGATAAAATTGCTgcagtaaataaaaacacagaaTCTGCATGTGAAGATCATGTAAGTCTCAAAACGTATCCTGAAGAGAATATGTTGAGGCACATTGAGaacaaacacacagacactCAGTTGAAGTTGCCTCAGGAGGAGCAGCTGTACAAGTGTAGCAACTGTGATATGAGATTTAGCAATTTGTTGTACTCACAGCAGCATGCAACTAAATGCACTGGTGAAGTGAAGTCGTCACTGGCAATGCTTAAGAGAAAAATAGAATACTCTCTCGGCGATACCGGCAAATctaaggaaaacaaaaaaaggaaaaaaggcaaaaaatcTGAATCCGCAATGGATACTGTTTGCGATCCCCTACATCTGGAATCGAACAATGGTCAGATTGCTATACGTACTGTGAAAACGTTTGTCTTGAATCAATACGAAGAGCACATAACTTACGCATGCCCGGAATGCAATCTGCCGCTGGCTACTAAAGAGGCCTGGAATGCACACATTAACAGCCGCCATGACTTCTTCTCAGAGAAGCAGCTAAAAATAGCTCCCATAGAGGGGGAAAAACAAAAGTGGTTGTGCGAGGAGTGTGGTATTACTGTGTATGCCAGCCTGCTGAATGCGCAACGGCACAAACTCGTACATTTGCCATACAAACCTTTTATTTGCTCTATTTGCCAACACCgctcaaaaacaaaacatgcGCTGATTCGTCACATAAAGCACCAGCATTTTACGTCCGGTTCAATCATCCGGTGTATATTCTGCTCCTTGATTTTTGGGACATCTTACGAGCGTTCCATACATATAAGAGCAGAGCACTGTGATGCCAAATGGCCGGCTAAGGTATGTAGGGTTTGTATGAAATCTTTAAAATCACGCTCGTATCTGGCGGAGCACATGAAGTCACATGATCCTGATCGTGTGACATACTCTTGTGGATATTGTGAACGGAAGTATTTTAGTACATATAACCGTAAGATACATTGGATTCAACACCATTCAAAGGAATATAGTACAGATCAAGCCGATCAGCAAGCGAAAGAAAGCAAATCGCAAACACATTAG
- Protein Sequence
- MLRSIQAAICVVPIDGHGDQSGQDSFIKVEVVNVKPEPNFYDQEEAQLDTADKNDIYYDITKTEYEVQTIYWSGSPIKKRDGKTVLNDVVKEEIVKVEKEEEVIEEGDAEGEIEEDADYSDLHVLESFVLESEEDEEEDNNDESGNSQNHDVESVDLEISDVEDTTLKKKPDQLLQKKHHFFESYFIRACPICGTDFENLSSWKAHMDNVHNHNKRKYYSAYYSYTENGKAKCNSCNIIFSSKLHSLRMHSLMHLPNRNFFKCKLCSETKSQLSSMIKHIKKQHLGHLQEQSINIQTQHAGLYKHKIRYVCPVCGVNFATKNCWKEHLDQEHKFNSLGGLSFELVDQHNPSTTNHMKYRCMTCKMIYPSTSPFCLLYNHALQHLPFKVFKCSYCDYAHSKKLQIIKHACEAFPKANPQLAGKTPSKTQKNVQRILDTNETLYICPSCGEHFEEVALWAVHLTRAHNLDQMKALNIQITLAEDDNLKYSCLICDKDLSKANSHNIRTHAFRHMAHKIYKCKICHSAFNKKPCGNCASSSEFADTGKSKKHSTREKCKKSESAIDSFCDSLQLKSNNVQNLAQTKIAVRTEKTIVWNQYEEHITYACPECNLPLANNEAWHAHINSRHDFFSENQMKIAPIAGVKQKWLCEECGVTVHGCLVHAQRHKLVHLPYRAFICCICQHRSKTQNVLIHHIKRRHFTSGSFKCIFCSLIFGTYYERFIHTKAEHCGAEWPDNICRVCMKSLQSPSYLAQHMKSHDFDQQAKICHSAFNIMPACNSKQTNGERECRTTVSAESKNIIYGCPQCGEDFRTEQLWDIHIVKEHDLREPRGLNFSKISDGGDGISIYKCSVCDELVKTSTSLSQALFDHASIKHMPFKSYKCSACGEMYTRKDDILIHVNNCKESEDFSKSSEDKIAAVNKNTESACEDHVSLKTYPEENMLRHIENKHTDTQLKLPQEEQLYKCSNCDMRFSNLLYSQQHATKCTGEVKSSLAMLKRKIEYSLGDTGKSKENKKRKKGKKSESAMDTVCDPLHLESNNGQIAIRTVKTFVLNQYEEHITYACPECNLPLATKEAWNAHINSRHDFFSEKQLKIAPIEGEKQKWLCEECGITVYASLLNAQRHKLVHLPYKPFICSICQHRSKTKHALIRHIKHQHFTSGSIIRCIFCSLIFGTSYERSIHIRAEHCDAKWPAKVCRVCMKSLKSRSYLAEHMKSHDPDRVTYSCGYCERKYFSTYNRKIHWIQHHSKEYSTDQADQQAKESKSQTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -