Basic Information

Insect: Myopa tessellatipennis
Gene Symbol: -
Assembly: GCA_943737955.2
Location: OX031317.1:19994317-19996862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.1 5.4e+02 2.5 1.2 1 23 145 168 145 168 0.87

2 9 0.025 3.2 9.5 2.0 2 23 239 261 238 261 0.95

3 9 0.26 34 6.3 3.4 2 23 456 477 455 477 0.96

4 9 0.0031 0.4 12.4 0.7 1 23 483 505 483 505 0.97

5 9 9.1e-05 0.012 17.2 2.0 1 23 511 533 511 533 0.98

6 9 2.4e-06 0.00031 22.1 0.2 1 23 539 561 539 561 0.99

7 9 9.3e-06 0.0012 20.3 0.6 1 23 567 589 567 589 0.99

8 9 0.0014 0.18 13.4 6.8 1 23 595 617 595 617 0.99

9 9 0.00015 0.019 16.5 1.8 1 23 623 646 623 646 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.1	5.4e+02	2.5	1.2	1	23	145	168	145	168	0.87
2	9	0.025	3.2	9.5	2.0	2	23	239	261	238	261	0.95
3	9	0.26	34	6.3	3.4	2	23	456	477	455	477	0.96
4	9	0.0031	0.4	12.4	0.7	1	23	483	505	483	505	0.97
5	9	9.1e-05	0.012	17.2	2.0	1	23	511	533	511	533	0.98
6	9	2.4e-06	0.00031	22.1	0.2	1	23	539	561	539	561	0.99
7	9	9.3e-06	0.0012	20.3	0.6	1	23	567	589	567	589	0.99
8	9	0.0014	0.18	13.4	6.8	1	23	595	617	595	617	0.99
9	9	0.00015	0.019	16.5	1.8	1	23	623	646	623	646	0.97

Sequence Information

Coding Sequence: ATGATCAATACGCAGCTCGAGCATGTGCCGCTGCCCCTCAAACTGGAAGCCACGGATGACTTGGATCTGGAGGATGAGTCCGAGGAGACGGACTCCGATATGTTGGACGACGAAACGACACTGATGATCAGCAGCGACGAGGAGGCCGAGTTGGAGGCGCAGCGCATCCGTTTTCACGAGCTGATCGGACGAAACCTGCAGTTGCGCGAGCGCGGCCGCAGCACATCCAGCAGTGGCTCCTCCGTGATGCTGATGAGCGAGAAGAGCGACAAGAGCTCACATTCATACGGAGCTCCGTCAGAAGGAGTACGGAAACGCTGCAAGAAGCGCACTTCGTCCATCACTTCGGTTGCCTCCTCCATTACAACGGCGGCCAGCGAAATGGAGTCCTGCGGCAATATATTTATCCATCCCAAGCAGATCAGGCTCATCTTCAACTGCAGCTTCTGCGATCTGCGCTACGACGACATGAAAGTGTTCGCAGAGCATCTACACGGCACCCACAAGTTGTTTGCAACAACCAAGACAGCTCCAGAGCCGCCTCAGCAGGCAAAAGCTGTGCACAAGAGCGCCCCGAACACAGAAGAGGGCCCAGAGGACTTGCTTGTGAAGACAGAGCTTCCCGAGTTAACAGCGGCTGGCCCGGCTCACATCCAAGAGACTCTGGATTCCTGCGGCAACATGTTTGTGCTCAATAAGCAGAAGCTTTTCCTCACCTGCGGCTATTGCGAGTGCAAGTACGCCACAGAGGAGTTGTTCAGCAAACACTTGCGCCAGCAGCACCAGTTGCTGGAGGGCCCAGTGAACGAGATCACAGTGCAACCCAAGCAGGAAATCAAGTCGGAGGTAATTGCAATGGATGACCTGCCCCAGGAGCCCGGCAGCAGTTCCCCTCAGCCAGTACCCATGGTGGCCATACCAGAAGGTATGCCGCTGGACAACAACGACTTGCTGCTGACGCTTTCAGTGGACTGCAGCTCAAACAGCAACAGCCTGGACACACGCACACCACCTCAGCAGCGCGTTTCGACAGAGACCCCGCCCCCCGAAGAGGATGGAGCGGAGCTGCCTCCAGTGAAGCGATCCAGGCGGAAGCGTGCGGAGCCTGATGATCTTCCTAAACCATCCAGCAGAAGCAGGCGCAAGGTTGCGGCGCAGAACACTCAACCATCCCCTGTTTCAACGCGCTTGCGTCGCACTTCTGCCAACACCCAGAAACCGAAAGACTTCAACGTGCAGCCGCCCTCCTCACCCGAGTCTGCCTCCACCGATCGCCTCTCCACGGAGCAGGACTCGCCTTCGCAGACAGACGCCAAATCGACCGCTGGGGCCAAGCGAGCACCCAAGAAAACGCCGCAGGTGCTGCATTGCGAACAGTGCATGAAAACATTCACGAAAGTGACGCGACTTAACGATCACAAACGCGTGCACACCGGCGAGAAGCCCTACAAATGCTTCGTCTGTGGCAAACAGTTCCGCATCAAGATGCGTCTCGCCGAGCACGCTTTGCGGCACCGCAAGGAGAAGGCGTTCAAGTGCGAGATTTGTGGCCATGCGGTAGCCACGAAGCAGGATCTGACGCTGCACCAACGCCATCACAACGGCGACAAGCGCTACCGTTGCACGCAGTGCCCCAAGGCGTTTGTGCGCGGCTCCGACCTGAAGATACACGTGCGCATCCACACCGGCGAGAAGCCATTCACTTGCGAGGTCTGCCAGAAGGCCTTCCGCGCCAACCAGAATCTCATCGTGCACCGAAAGACGCATCGTTCCGAAAAGGAGTTCAAGTGCGAGTACTGCGACAAACACTTCATGCGCAACATCGACCGCAAAGTGCACCATCGCACACACACAGGCGAAAAACCTTTCAAGTGCGAGATATGCGACCGTGGCTACTCTTCACGCTTCCACGTGCGAACGCACATTGAACGCGATCACGTTCCGGGTGCTCCCCGTCAACGCAAGAAACCAGGACCCAAGCCGAAGCACATCAAGGAGGAGCTGGAGAAGCAAAAGCAGTTAATTGAAGAGCTGAAAATACAAGTCATCGAGCAAATAGAACAGCAACCAGGTGAAAACCCACGGACGCCGTTGACAGAGGAGCAGCTGCAAGAGTCGGCCGCACCTGTGGCTCCACCTGTCACGATTGAGCGCAAACTTGAGCGAATTTCGCCGGAGGAAACCATGCAACATGTGTCACTGGCTCTGAAGATAGCCCTGGAGGATGACGATGTGGACGAGGACGAAGTGCTAATGTTGGAGAAGGAGAATGACACGCCCAAGGAAGTTGGCAACGGCAATGATGGGGGCATTTTGCGACCGGACAAACAGAAGAGTGGGGCGACGTCGAACAAGGATCGCAAGATAACCAGCTACTTTACAGTAGTGGGTCAGAAGACCGAAATCTAA
Protein Sequence: MINTQLEHVPLPLKLEATDDLDLEDESEETDSDMLDDETTLMISSDEEAELEAQRIRFHELIGRNLQLRERGRSTSSSGSSVMLMSEKSDKSSHSYGAPSEGVRKRCKKRTSSITSVASSITTAASEMESCGNIFIHPKQIRLIFNCSFCDLRYDDMKVFAEHLHGTHKLFATTKTAPEPPQQAKAVHKSAPNTEEGPEDLLVKTELPELTAAGPAHIQETLDSCGNMFVLNKQKLFLTCGYCECKYATEELFSKHLRQQHQLLEGPVNEITVQPKQEIKSEVIAMDDLPQEPGSSSPQPVPMVAIPEGMPLDNNDLLLTLSVDCSSNSNSLDTRTPPQQRVSTETPPPEEDGAELPPVKRSRRKRAEPDDLPKPSSRSRRKVAAQNTQPSPVSTRLRRTSANTQKPKDFNVQPPSSPESASTDRLSTEQDSPSQTDAKSTAGAKRAPKKTPQVLHCEQCMKTFTKVTRLNDHKRVHTGEKPYKCFVCGKQFRIKMRLAEHALRHRKEKAFKCEICGHAVATKQDLTLHQRHHNGDKRYRCTQCPKAFVRGSDLKIHVRIHTGEKPFTCEVCQKAFRANQNLIVHRKTHRSEKEFKCEYCDKHFMRNIDRKVHHRTHTGEKPFKCEICDRGYSSRFHVRTHIERDHVPGAPRQRKKPGPKPKHIKEELEKQKQLIEELKIQVIEQIEQQPGENPRTPLTEEQLQESAAPVAPPVTIERKLERISPEETMQHVSLALKIALEDDDVDEDEVLMLEKENDTPKEVGNGNDGGILRPDKQKSGATSNKDRKITSYFTVVGQKTEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -