Basic Information

Insect: Myopa tessellatipennis
Gene Symbol: -
Assembly: GCA_943737955.2
Location: OX031314.1:10088255-10093495[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 8.7e-07 0.00011 23.5 1.3 1 23 372 395 372 395 0.97

2 10 5.6 7.3e+02 2.1 2.9 1 23 481 503 481 503 0.85

3 10 0.0024 0.31 12.7 2.7 2 23 547 568 546 568 0.97

4 10 0.00011 0.015 16.9 0.6 1 23 575 598 575 598 0.96

5 10 0.0015 0.19 13.4 1.6 1 23 608 630 608 630 0.99

6 10 0.099 13 7.6 3.7 1 23 654 676 654 676 0.97

7 10 1.8e-05 0.0024 19.3 2.4 1 23 684 706 684 706 0.99

8 10 0.00016 0.021 16.4 2.2 1 23 712 734 712 734 0.98

9 10 2.6e-05 0.0034 18.8 0.9 3 23 742 763 740 763 0.96

10 10 0.051 6.5 8.5 1.2 1 23 769 792 769 792 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	8.7e-07	0.00011	23.5	1.3	1	23	372	395	372	395	0.97
2	10	5.6	7.3e+02	2.1	2.9	1	23	481	503	481	503	0.85
3	10	0.0024	0.31	12.7	2.7	2	23	547	568	546	568	0.97
4	10	0.00011	0.015	16.9	0.6	1	23	575	598	575	598	0.96
5	10	0.0015	0.19	13.4	1.6	1	23	608	630	608	630	0.99
6	10	0.099	13	7.6	3.7	1	23	654	676	654	676	0.97
7	10	1.8e-05	0.0024	19.3	2.4	1	23	684	706	684	706	0.99
8	10	0.00016	0.021	16.4	2.2	1	23	712	734	712	734	0.98
9	10	2.6e-05	0.0034	18.8	0.9	3	23	742	763	740	763	0.96
10	10	0.051	6.5	8.5	1.2	1	23	769	792	769	792	0.94

Sequence Information

Coding Sequence: ATGGTAGATTTAAACCCACTTAATATCGAAGTGAAACAAGAGGAGACTGACGAAGAAGAGTCTCTACCAGAGAATGAATTTAAGTCTTTGTCAGAGAAGTCTCTATCAGAGAATGAATTtgaagcagaagaaaacaacatTCCAGCGAACAGTTCAATAGAAGTATTACCTGAGAATATTAAGGAAGAGGCAACACAACCACTTGTGAGTGGTACAGAAGATACAGCAGATACATCTAAAGTGACACTGGACAAAGGCGATAAATGTGAAAAAAGcTCAAAATATACTACGGCCGAGCAGTTTGCTGTGCTCATTGAAGAGTTGAGGAACCGGCCAGATATGGCTAAAGGCATTTCGGTCCCTGGAAGTAATAGACAGCAGTGGGACGAACAATGGGAGATAATCCGCGATAGGTTAAATTCGCGTGGCCCTCCCGTTAGGAACATCTCAGAGTGGAAAAAGgtttGGTCTGACTTAAAGTCAAGAACCAAAAAAAAGCTGGCTGAAAATGCCTCGGAAATTAGAACAGCTGTGGGAGGACCCGCCTGCTTAAGCTTCCTTATTCCGACTGAGCAAGAGGTGGACAAAATACTCAATTTGTCTGCAAATTTTTTAGCGACCGGCTCCGTACACGGCGCGCATAAAAGAAGGAAGCGATCCTATGAGGTACTAAGGGATGAACGAGCCCCTACTTCTACATCTTCTACCATGCCAGTCCCAGTTTCGCCTGCCTCAGCTGTACCGAAGGTCCGCAAGTCCGACGACGATGAGTTTTTATGGCTGCTCCGGCAGCAAACGAAAACGCAGCAGGAGTTGGAGTTCTCAGCAGAAGCTTTAAAATGTGAAAATTGCAAAGCTGGGATAGATCTAAAGCCATTTAATATTGACACAAAACCAGATATGGAGACTGCAGAAGTGTCTATATCAGAGACAACGCTGCATGCCGAATGTTTCGTCCAGCAAAGTTTTAAGTCTGAATTTGAAGCGGAATCATACGAAGGAAACAACATCCCGGCGAACGGttcaaagaaaatattatctaAAATGATTCAGGAGCAGGCAAAAAAACCACTTATAAGGAAAGATGCTGGAGATGCAGTTGAGGTGATGTTGTACAATTGCGATAAATGTGAAAAAAgTTTCAAGCGTCAATCTTTGCTTAGAGCACATGCAAAGCGTATCCATACCAATTCTGATGGTGAGGACGAAAATTCTGTAAATGATAAACGAAAAAAGTTAGAACTTTTAAATAAGCGAGAATATATCAAGAAATATCAGGCAGCTATATTATCTTCGGACGATAGCGACAAGGAATCCAATGGTTTCGACGAAGATTCCGAATTGGCACTTATTGATGTGGAGTCATCCATTCCGACTGATTTGAATACTCTGTATGAGGCATTAACTAAACTGAAGACGACTCCCATCGGTGAAAGCGTTTACAAGTGTCGCATGTGCAAAAAAATCACTTTCGAACTTCGAGATCACTTGAAGCACATCATTACTCACACTGGCCAGAATTGCAATACTTGTATGTTGTGTGAGGATGTGTTTCTTGGTGCCAATAGCCTGGATGAGCACATGTTGAGGgtacacaataataatggtGGTGATGAGTATTTGCCATGTGGCATTATCAAATGCAAAGAGTGTGAAGAATGTTTTCTAAGTGCGTCAGAATTCAAGCGCCACAAACGCTGGCATGCAGGCAAACAACTTTTGCATAATTGTGATATTTGTCAAGTGGGCTTTAGCACCAACGCAATGCTGGAGAAGCACAAAAGAATCATACATAAAGCTTCGGAGAATTTGCCGAAACGTTTCAAATGTTTCCTATGTAAAGAAGGATTTGCCTTTCAGATCCTCCTGACAAATCATAAACGTTCTCATCCAGAATTTTTCGAACTCATCGAACGCACAACAATCATTAAACGTTACAATGATAGCAATAAAATTCTTTACGCTTGTCGTACGTGTGGCAAATCGACCCATACTCAAACAAATCATTGGGATCATTTACGCATTCACAGCCCCGAGCAGCGTCAGATGTACAAATGCACACTCTGCCCCAAACAGTTTACGGCCCATTCAACCCTCAAGGCACATCTGCGTCTGCACACTAACGACCGTCAGTACAAATGTGAAATCTGTGCAATTAGCTATCGACATTCTAAAACACTGCGCAATCATTTGATTAAACACACCGGACAGTTGCCGGTCATATGCAAGTATTGCGACAAAAGTTTCAGAGATCAAAATCAGCGTACTGAGCATGTGAGACGCGTGCACACCGGCGAGACCCCGTATCAGTGTGATCTCTGTGGTGAATGGTTTACCTTAGCCACTCTCTTGCGGACTCATAAACTCCATAAACATAATGTGGACACCAGACAGAAACGAAGCGTCGACATAATTCCCATAAATTCGAACCCTAGAAATAAATCATAA
Protein Sequence: MVDLNPLNIEVKQEETDEEESLPENEFKSLSEKSLSENEFEAEENNIPANSSIEVLPENIKEEATQPLVSGTEDTADTSKVTLDKGDKCEKSSKYTTAEQFAVLIEELRNRPDMAKGISVPGSNRQQWDEQWEIIRDRLNSRGPPVRNISEWKKVWSDLKSRTKKKLAENASEIRTAVGGPACLSFLIPTEQEVDKILNLSANFLATGSVHGAHKRRKRSYEVLRDERAPTSTSSTMPVPVSPASAVPKVRKSDDDEFLWLLRQQTKTQQELEFSAEALKCENCKAGIDLKPFNIDTKPDMETAEVSISETTLHAECFVQQSFKSEFEAESYEGNNIPANGSKKILSKMIQEQAKKPLIRKDAGDAVEVMLYNCDKCEKSFKRQSLLRAHAKRIHTNSDGEDENSVNDKRKKLELLNKREYIKKYQAAILSSDDSDKESNGFDEDSELALIDVESSIPTDLNTLYEALTKLKTTPIGESVYKCRMCKKITFELRDHLKHIITHTGQNCNTCMLCEDVFLGANSLDEHMLRVHNNNGGDEYLPCGIIKCKECEECFLSASEFKRHKRWHAGKQLLHNCDICQVGFSTNAMLEKHKRIIHKASENLPKRFKCFLCKEGFAFQILLTNHKRSHPEFFELIERTTIIKRYNDSNKILYACRTCGKSTHTQTNHWDHLRIHSPEQRQMYKCTLCPKQFTAHSTLKAHLRLHTNDRQYKCEICAISYRHSKTLRNHLIKHTGQLPVICKYCDKSFRDQNQRTEHVRRVHTGETPYQCDLCGEWFTLATLLRTHKLHKHNVDTRQKRSVDIIPINSNPRNKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -