Basic Information

Insect: Myopa tessellatipennis
Gene Symbol: Kr-h1
Assembly: GCA_943737955.2
Location: OX031316.1:59152628-59155388[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.027 3.5 9.4 1.9 1 23 207 229 207 229 0.98

2 8 1.9e-06 0.00025 22.5 0.4 1 23 263 285 263 285 0.99

3 8 1.1e-05 0.0014 20.1 1.4 1 23 291 313 291 313 0.98

4 8 7.7e-05 0.0099 17.4 3.5 1 23 319 341 319 341 0.98

5 8 1.3e-06 0.00016 23.0 0.3 3 23 349 369 348 369 0.99

6 8 0.00016 0.021 16.3 1.5 1 23 375 399 375 399 0.99

7 8 0.0046 0.59 11.8 2.2 1 23 405 427 405 427 0.98

8 8 4.2e-05 0.0054 18.2 0.6 1 23 433 455 433 455 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.027	3.5	9.4	1.9	1	23	207	229	207	229	0.98
2	8	1.9e-06	0.00025	22.5	0.4	1	23	263	285	263	285	0.99
3	8	1.1e-05	0.0014	20.1	1.4	1	23	291	313	291	313	0.98
4	8	7.7e-05	0.0099	17.4	3.5	1	23	319	341	319	341	0.98
5	8	1.3e-06	0.00016	23.0	0.3	3	23	349	369	348	369	0.99
6	8	0.00016	0.021	16.3	1.5	1	23	375	399	375	399	0.99
7	8	0.0046	0.59	11.8	2.2	1	23	405	427	405	427	0.98
8	8	4.2e-05	0.0054	18.2	0.6	1	23	433	455	433	455	0.98

Sequence Information

Coding Sequence: ATGGTTTATTATCAACCAATGTCGCTCATTGTTAAAACAGAACAACCGCAGTTCTGTGCCCCCTTAAGTAATGGAGACTCGACTGCGGTGGGGGCAACTGGAACCCCCAACTTGGCGCAACCTcctcaacagcagcagcaacatcaacaacagcagcaacagcaacattcacaacaacaacagcagccgcaagagcaacaacaacagcaacatccacagcaacagcaactacagcagcaacatcaacagcaacaacaacagcaacattcacaacaacaacagcaacattttgCACAAAATTGCACTCTACACAGCAACACATCAGCTGCTGTTACCTTTCTGCACCAGCAACAATCGCACCAGCAACAATCACCACCAAGTATTACCAACATAAGCAGCCACATTTTACATGGTGCCAACACAACGCCACTCCATGCCAACGCCTTCGCGGCCACGAGTGTCAAAACGGAGCAGCTGCCGCCCGGCACAGCGATATACAGCGAGCCTTCCGCCCCTGCTCCCGTCCTTCCCATGACAGCCACTTCTTCTAGTTCGATCTCGTCGTCCTCGGGCGTGGCACCGACAACCTCCCAGAAGCCAGTCGTCGATAAGCCGAAATTCAAGTGCGCCCAATGCGGCATGATTTTCGGCAGCAAGTCGGCGCACACGTCGCACACGAAATCGCACGCGAAGGGCGACAAAATCATGGAGGACATGATGGTCGACATGCCGCTGGGCATACCAAAGAAGCCCTTGATCAAAGCCAACCTGGGCAACGGGGATCCCTACCAATGCAATGTCTGTCAGAAGTCGTTCGCAGTTCCAGCAAGACTGATTCGTCACTACCGCACCCACACCGGCGAACGACCGTTCGAGTGCGAGTGGTGCCACAAACTCTTCAGCGTCAAGGAGAATCTGCAGGTTCATCGCCGCATCCACACCAAAGAGCGTCCGTACCAGTGCCAAGTCTGCGATCGCGCCTTCGAGCACTCGGGGAAGCTGCATCGGCACAATCGCATTCACACGGGCGAACGACCACACGGCTGCACGCTGTGCGACAAGACGTTCATTCAGTCCGGCCAACTGGTCATCCACATGCGCACACACACCGGCGAGAAGCCCTACAAGTGTCCCGTGGAGGGTTGCGGCAAGGGGTTCACCTGCTCCAAGCAGCTGAAGGTGCACTCGCGCACCCACACCGGCGAGAAGCCGTACCGCTGCGACATCTGCCAGCGCGAGTTCGGCTACAACCACGTGTTGAAGCTGCATCGCATGCAGCACTACGGCTCCAAGTGCTACAAGTGCACCATCTGCGACGACACGTTCAAGAACAAGAAGGAGATGGAGGCACATATCAAGGGCCACGCCAACGATCTGCCTGACGAGGGTCGGAAGGAGCTCTCCTGcgtcagcagcagcagcagtagcacTCAGAGTTCGAGCCCGGGTTCGCCTCATTCACCCGTTTCCAGCGTGCAGCAAGCACAAGGGACTCTGGTCCCCCTAAAGAAGGTCGGAACCAAAACCAGAAGAGGCTTTACAGTCGCTGCTGGCCCGGTGTCACCACCCATTGCAGCGGCACATTCGCCACCAGCTGGCTTCATGGAAACCATGGGGTCTGCGAAAGCATCCCCAACTTCAACATCCACAACAACATCGCCAACCATGATAACGGCGCTTTCCTATGAGACTGAAGACGACTCCAGCAACGCCCATTGCCAACGCTACTTGGCCGCAATGGACACTGACTACGCTTTGGACGAGAGGCCAACTGATCTGCGTGTgttgcaacaacagcatcagcagcagcaccacGAGCAACAGATGCCGCCCCTTAGCTACAGTAATAATGACAACATATACCAGGCGCACGCTGCCACCTACAACATTATGTTGCACTCACCACCGCCCAGTGTGTCGCCAGCATCTGCCACGGAGCAGCTCCAGCAGCACCCTCAACTCCTATCTGCGGAGCCGACTATCAACCCGGCCCTGCTGGAGGCAGCCAGCATCGCCACGCGCATGTCGCAAGTCAACATCGTGGAGGAGAACGACGCGGAGACGCAAGCTGCACTACAAATCATGCAGCTGCATCGGTCGCATCAACCGCAGCTGCAGCAGGTTCAACAGGAAGAGCTGCATCATGACCAACCTCAACACTACGACTACGATGACACCCAAGAGGCCAATCAGCTGATCGAGCACTACAAACGCGGCGAATTGGCTGCACACGGCATTCACAAGGGATACGCGGCACCGGTTCCGAAATTCGAGTCTTCCCTTCTAAACAACGAGATAATCGTGCGCCAGGTGGAAGCCGCCATCGCGCCGCTGCGTTCATCGACTGAATCACCCGAACGCGCTTCGTCGCCCGAAAGCGATTCCAACATGATGATGGCGGATCGCGATGTGATGACGTTGCCCCTCCGCAAACGAAAGGTTTACATGAGCGAAGGACCACGCCCCAAGACTCCCACACCCGTAGCACCCGAAAATGGGAATGGCACCAGTgggacagcaacaacaacaacgatgggCGCCAACGTAATTCGCATGAGTTCAGTGATTCAATTTGCCAAAGCTTCCTAA
Protein Sequence: MVYYQPMSLIVKTEQPQFCAPLSNGDSTAVGATGTPNLAQPPQQQQQHQQQQQQQHSQQQQQPQEQQQQQHPQQQQLQQQHQQQQQQQHSQQQQQHFAQNCTLHSNTSAAVTFLHQQQSHQQQSPPSITNISSHILHGANTTPLHANAFAATSVKTEQLPPGTAIYSEPSAPAPVLPMTATSSSSISSSSGVAPTTSQKPVVDKPKFKCAQCGMIFGSKSAHTSHTKSHAKGDKIMEDMMVDMPLGIPKKPLIKANLGNGDPYQCNVCQKSFAVPARLIRHYRTHTGERPFECEWCHKLFSVKENLQVHRRIHTKERPYQCQVCDRAFEHSGKLHRHNRIHTGERPHGCTLCDKTFIQSGQLVIHMRTHTGEKPYKCPVEGCGKGFTCSKQLKVHSRTHTGEKPYRCDICQREFGYNHVLKLHRMQHYGSKCYKCTICDDTFKNKKEMEAHIKGHANDLPDEGRKELSCVSSSSSSTQSSSPGSPHSPVSSVQQAQGTLVPLKKVGTKTRRGFTVAAGPVSPPIAAAHSPPAGFMETMGSAKASPTSTSTTTSPTMITALSYETEDDSSNAHCQRYLAAMDTDYALDERPTDLRVLQQQHQQQHHEQQMPPLSYSNNDNIYQAHAATYNIMLHSPPPSVSPASATEQLQQHPQLLSAEPTINPALLEAASIATRMSQVNIVEENDAETQAALQIMQLHRSHQPQLQQVQQEELHHDQPQHYDYDDTQEANQLIEHYKRGELAAHGIHKGYAAPVPKFESSLLNNEIIVRQVEAAIAPLRSSTESPERASSPESDSNMMMADRDVMTLPLRKRKVYMSEGPRPKTPTPVAPENGNGTSGTATTTTMGANVIRMSSVIQFAKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -