Mtes001530.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Myopa tessellatipennis
Gene Symbol
-
Assembly
GCA_943737955.2
Location
OX031314.1:10077140-10080057[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 2.7 3.5e+02 3.1 0.0 3 11 6 14 5 19 0.89
2 11 0.00016 0.021 16.4 1.6 1 23 460 482 460 482 0.98
3 11 0.0095 1.2 10.8 1.8 1 23 487 509 487 509 0.98
4 11 3.1e-05 0.004 18.7 1.5 1 23 516 539 516 539 0.97
5 11 0.00056 0.073 14.7 1.1 1 23 547 569 547 569 0.98
6 11 3.2e-05 0.0041 18.6 2.3 1 23 575 597 575 597 0.99
7 11 0.021 2.8 9.7 5.4 1 23 640 662 640 662 0.98
8 11 0.011 1.4 10.6 0.4 1 23 668 690 668 690 0.97
9 11 1.7e-05 0.0022 19.4 3.3 1 23 696 718 696 718 0.99
10 11 3e-07 3.9e-05 25.0 0.4 1 23 724 746 724 746 0.98
11 11 0.0006 0.078 14.6 0.1 1 23 752 777 752 777 0.91

Sequence Information

Coding Sequence
ATGGCAACACCAATATGCCGAATCTGTGGTACATCTTTTAATCTGATGCACGTGTTGCAAGGCGGACAGGAGCTGCTAGAAAAGCTGCGTGTCTGTGCAAATATTCAGaTTGACTTCGAACGAAATCTACCGCAACATATCTGTTTGAAATGTGAACAAGGTCTTAACTTTTCATATCGCTTGCGAAAGCAGGGTGAAGCCACGGAGCAGAAATTGCGGCAGAaactgcagcagcagcttcaACTGCAAAGCAGTTGGAAGGCACAGTATAAACAGGGACGGAGTAGACAGGAACAGGTAGATATTTCGGTGGACTTGTGTAATGAAGTGGATGACGTTGAAGACGAGCTACAAAAGTTCAGAGTGCAAAACGCAAATAAAACAGATCACTTGAATGAAGATGAAAACTATGCTCACCAAGGAAATGGAATAACAAAGAATCACAACCAAGACGATGAAGTGGTTATGGTTGAAACAAAGCTAGGAAATGTGTCGCCGTCAACAATCACTGAGAATAATCAGGTTATGCTAACCACCACTAACCAtgtaaatgaaaaagaaattgTTGAAGTTTTCACTCCATTGTCAATGAGCTCAACCAACGTTGAGCAGCCGTTGGTGATGGCGGCCAGTGGCACATTCCTCGATGAAAAGGGGATGGTAAATATACTCGACAACGATGTCGAGATTATTGAGGACTGCGAAAATAGGGTAATCGATAAGACTGAGTGCTACCCAGCGGAGCTTGAGGATGATGATGTTCAAATAATTGAAGAGTTTCATCCTTCTGCTGATATACTTGAAAATCAAGCAGCATTTGCCGCGAGTTTTGATACGGAGTTGACTGAAGCAGATGACATTAGTCAACTGGTCGAAGTGCAGTACATGGAACCAATAGATATCCTACCTAATACGAGTACAGAACGAAACAATGAAAACGTTTATGGAACGTCTGATTTCGATGACGGTCATTTGGAGGAGAAAAAAACGAGCGATATAAAAGATATTTATGGTTATTCTACAAGCGTGATGCAATCGGATGCAGCTATTATAACACAGGATATATTCAATGGTGGTATTATTCAAGCGGAATACGACTCACAAATATTGAATAGTGCTAATAATGGAATGCAGCTGATGGACAATCGAATGGAGTTGAAGTACGAGTCGATAGAAAAACCGAGCATTGATTTGATTGAAAAAATTGAAGTGGGAAGCGATGATGGATCTCTTATCCATCATTATAATGCGAATGAAGGGGATGCGGAGGAAGaagatgaatatgaagcagGAGCCACTAATGAAGTCTTGCCTGACATTATGCAAAATACTCTGTTGAGTTTACAGAATCGAGGTTCATTAAAGATCAGTGTTATTTACAAGTGTGAGACGTGTTCGCAAAGCTTCATTACCCAGAACGAATATCGTCAGCACGTTAAAGAGCACGGACGCGAACGGTTCAATTGTCTGCAGTGCAACAAATGGTTCCCGTCGCGGTATCGCTTGCAGCAACACGAGCGCACTCATAGCGATGATACAGACTTCTACATCTGTTCGATTTGCGCCAATCGCTACAGACATCCGCAAAACCTAAAGCGTCACATGCGTAGCGCTCACAACACAGAATGTCGCAATCCATATCAGTGTGGTCTGTGCAACGAAGTTTTTCACCGTCCGGATATATTAAAGAATCACATGACTAAGCATATCGTCGATCGAAATTTCACGTGCGAACTCTGCTCGAAGAGCTTTAAATcaatgttttatttgattgcTCATAAGAGGACTCATCTACCAAAAACGGCGAATGCTAACAAACGTCCCTTGAACTCCACCAACTGCACTCCTATCTACACGTCCACGTCCACGGACAGTTCGAGTTCGCCCTATCCTAGCGATGCGGCGAAACAGCGCACTTATTATTGCGCTTATTGTGGCAAAGTGTCGAAGCATAATTTCGCTCACAAAAACCACTTGCGCACGCATACGAACGAGCGTCCGTTTCCTTGCGATTTCTGCGTGAAGAAGTTCCGAACGCTGGCGGCAAAAATCACCCACGAACGCATTCACAACGACGTGCGACCGTATCAGTGCAGCCGTTGTTTGCTCTCCTTCCGTCAGTCGTCACATCTCAAGGAACATCTGCGCGTTCACGACGGCATCATGCCGTTTTCGTGCAGTGTGTGCAACATAGCGTTTGCCAAGAAGAGCAACCTCAAGGTACACATGCGTATCCATACCGGCGAGCGACCGTACAAATGCGCCGACAGCGAATGCGGTGAACAATTCGCAAAATTGTCTCAACTCAAGAGGCACGCAGCGCAGGCTCATGCACGTGATGTGGAAGTGCGTGAGGATGACGAGGAcgatgaggaggaggaggaagaggaggagggGGCGGAGGAAGAGAACGAGTTGGCCGATGAGGAAATTAGCGAGGAGGATGGAGCGGAGGAGGAATTATTGCTTAGGCAATGCAACATCACGAATGTTCACATGATAGACGACGACGGCATCCACAACGACGGTTATTTGGATGTCGGAGTTGGCGCCGAGGATACAGCCATGGAACTGATGTTAGGAAGCGCCGATTCTCAGTACAATAGTTTATATATTATGGATGAAATTAATTCAAGCTGA
Protein Sequence
MATPICRICGTSFNLMHVLQGGQELLEKLRVCANIQIDFERNLPQHICLKCEQGLNFSYRLRKQGEATEQKLRQKLQQQLQLQSSWKAQYKQGRSRQEQVDISVDLCNEVDDVEDELQKFRVQNANKTDHLNEDENYAHQGNGITKNHNQDDEVVMVETKLGNVSPSTITENNQVMLTTTNHVNEKEIVEVFTPLSMSSTNVEQPLVMAASGTFLDEKGMVNILDNDVEIIEDCENRVIDKTECYPAELEDDDVQIIEEFHPSADILENQAAFAASFDTELTEADDISQLVEVQYMEPIDILPNTSTERNNENVYGTSDFDDGHLEEKKTSDIKDIYGYSTSVMQSDAAIITQDIFNGGIIQAEYDSQILNSANNGMQLMDNRMELKYESIEKPSIDLIEKIEVGSDDGSLIHHYNANEGDAEEEDEYEAGATNEVLPDIMQNTLLSLQNRGSLKISVIYKCETCSQSFITQNEYRQHVKEHGRERFNCLQCNKWFPSRYRLQQHERTHSDDTDFYICSICANRYRHPQNLKRHMRSAHNTECRNPYQCGLCNEVFHRPDILKNHMTKHIVDRNFTCELCSKSFKSMFYLIAHKRTHLPKTANANKRPLNSTNCTPIYTSTSTDSSSSPYPSDAAKQRTYYCAYCGKVSKHNFAHKNHLRTHTNERPFPCDFCVKKFRTLAAKITHERIHNDVRPYQCSRCLLSFRQSSHLKEHLRVHDGIMPFSCSVCNIAFAKKSNLKVHMRIHTGERPYKCADSECGEQFAKLSQLKRHAAQAHARDVEVREDDEDDEEEEEEEEGAEEENELADEEISEEDGAEEELLLRQCNITNVHMIDDDGIHNDGYLDVGVGAEDTAMELMLGSADSQYNSLYIMDEINSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-