Mtes012043.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- -
- Assembly
- GCA_943737955.2
- Location
- OX031315.1:16090303-16094243[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.011 1.4 10.6 2.8 2 23 181 203 180 203 0.96 2 20 0.55 71 5.3 0.4 1 23 210 235 210 235 0.89 3 20 0.074 9.6 8.0 1.9 3 19 247 263 246 265 0.94 4 20 9.5 1.2e+03 1.4 2.7 2 19 278 295 277 299 0.76 5 20 0.023 2.9 9.6 0.7 2 23 307 329 307 329 0.92 6 20 0.0099 1.3 10.8 2.2 5 23 339 357 335 357 0.91 7 20 9.3e-05 0.012 17.1 3.7 1 23 363 386 363 386 0.97 8 20 0.00032 0.042 15.4 2.8 2 23 393 414 392 414 0.97 9 20 8 1e+03 1.6 0.1 3 20 425 442 424 444 0.92 10 20 6e-05 0.0078 17.7 0.4 1 23 463 487 463 487 0.88 11 20 0.14 18 7.1 2.0 1 23 492 514 492 514 0.97 12 20 0.078 10 7.9 0.6 1 23 530 555 530 555 0.94 13 20 0.1 13 7.6 0.6 2 19 561 578 560 581 0.91 14 20 0.0022 0.29 12.8 4.5 1 23 588 611 588 611 0.95 15 20 0.019 2.5 9.9 0.2 3 23 618 639 616 639 0.90 16 20 0.0017 0.22 13.1 1.8 2 23 643 665 642 665 0.96 17 20 3.6e-05 0.0047 18.4 0.4 1 23 671 694 671 694 0.97 18 20 0.0021 0.27 12.9 0.4 1 23 699 721 699 721 0.98 19 20 0.00034 0.044 15.4 0.9 1 23 727 749 727 749 0.97 20 20 0.0011 0.14 13.8 0.5 1 23 755 783 755 783 0.87
Sequence Information
- Coding Sequence
- ATGTCAGATAGATTGGAACCGATTCAGTGCATCAAATGTGGTCGGACCGATGATGTGAGCTTTCATGATGTTTTTAGTGATGTGGGGATAGAATTACAACTGGACTCACTGTTGGAACATCATTTTAACATCAAGGTCGTCTATAATCCATTCCACAATCAAGTTGTGTGCGGTGAGTGCGTGAATCGACTGATTGAGTTGTTTGATATAGAAGAGAGATTCAAGGAGCGGGAGGCAGAAAGTATAATtggagaaagagaaaagatcATAGTCGAACATGGTACACCGTCTGGATCTGGAAACAGTACCGCTGCCACTGAACAATTTACTACGGAAGTTAAAGACGAGGAAGTGTTTTCTTGGGATGATCAAGAAATATTCGAGTACGTTGAATTCAACACCAATGAAGTGTCTGAGGTAGCGGCGGCATCTGTTGTTACCAATAAAGGTTTCGACAAATTTCAAGATTTTGACCTAGAAATTTATGCAGACGCTATAATCAACAGTAATCTGGAAGAACTGCAGCTGGAACGAGAAAGTACATGCAATGTTTGCTTCgaaaattttacaaaacaTCAAGATCTACTCATGCACATTAAAAAGCAGCATGAACATGAAAACGGATTTTATCCTTGTGTATTGGAAAATTGccataaaattcttaaaagtGAACGGCGTTTGGCCAGGCACATTGTTTTGAAGCACTATAATTTGAGCGAaATTCCAATTTTTGGCGCTTGTCGAGACTGCGGAATGACATTCTCGAATTTCTTAGATTTCAATAAGCATTCGTGTTGTACAACGCTAAAGTACAGAGAGAAAATTCCGAGTTATTGCAGCATATGCAATATGAAATTTCCAACTTTTAGAAGGTTTCGTTTTCACAAGCAATTTCATTTGGAAAAACGACGACCTAGAGTTTGTTTACTGTGTGATCGCTATTTCACTGATAGTGAAGAATTCTTTGAACATGTACATTATGAGCATGAGTCAGAAGATCGATTGATATGCATAACATGTGATCGCTGTTTCAAGAATAAGAAGCTATTTGAGACCCATTTGGCAAACCATAATATGGAATTAAAATACAAGTGTACGCTGTGCCACAAAGCTTATACTCAAAATAATAGGCTACAAAATCACATGGAATCATATCATAATAGTGGGGATCATCTTAAATGTAAGTTCTGTAATAAAATCCTATCAAACCGGGATTATTTTCGAAATCACATGAAGCTACACGAACCAGAAGTGGATGTGCAAGTCAATTCTTGCACAACTTGTGCACTTGTTGGAAGAGATAAGATATATTTACAGGAACACACTGAAAACAGAAGATCCAAGTGCTTTAAAGCTCCTATTGAAGAGGAGTTCTTATCTGTGGTTTATTTGTGCGAATATTGCGATGAAACTTTTAAAAGCAAAGTCGGGTTGAAGAATCATCGAGACACTGGCATACATATTGATAAATTGTTTCATTGTCCTTTATGTTCGGCAACATTTAATGAGTTGCGTAAGGTACGGGCGCATTTCAAATCCCACAAAATATATGAGGATTGGCAGAAGTCTTTCCCATTGCTACGGAAGTTTATGTGCGATGTAGGCGATTGCCAGCAATCATATGCAATGTGGATGTCGTTATGCAGTCACAAAGCTATGAAACACAAGGAAATACAACTAATCTGTACCAAATGCAATCGCCAGTTTGAAACTAAGCTTGATTTCGATAGGCACTCAGAAAAATGCGAGAAACGTGATCAGCATGATTGTCAGTTTTGCGGGAAGAAATGCACGTCAAAAATGTCTCTTTCCGTGCATATGGCGAGGAGTCATAACAACAaAAACGTAAACTGTACCGTATGTAAAGCGTCGTTTAAAGATAATGAAATTCTACAGAAACACATTGATTTTGTTCATGTTCAAATGGAATGCAAACTATGCCacaaaatagtaaaaaaccaaagaaatcTTTTACTGCATGAACGCGTTAAACATAGAAATGTAAAGCGTTACTTTTGTGAAAGCTGCGATAAAGGTTTCTACAATAAGAGTGATATGGAAGCGCATGAAAGAACGGCACACTCGATGACAAATTTTGTTTGTGAAAAGTGCCCTTTTACCACCAATTACAAGAACTCACTGGATGTGCATATGGCGATGCATAACAATGATCTGCAGTATGAGTGCCCTATTTGTGGTAGACATTTTGCTCGAAAGAGAGTAATGGACCTTCACGTTAAGCGTCATGAAGTACATCGGGAGTTTGTTTGCTCCGATCATGTTGCAAACGGGTGTCCGGCTTCCTTCATTACAAGGTACCTACTTAAAAAGCACATTAAGGAGAAGCACACAAGTAACCAAGAAACAACCGGATCTGCGCCAAAATTAAAACTCGGTCGCCGAatgtatacaaaaacaacaattaacgCAGATGTAGAAGATATCGATGCAGATGATCCCGTAGCTTTCCCACCTAATACCTCCAACCGATGTCAGATGTACTTGTGTTATAATAATTATGGTGAACAAGTGGATGAATTGATTACAGACTGTATAGAAGTTGATATGACGTTCAGAGACAATAATAATTAG
- Protein Sequence
- MSDRLEPIQCIKCGRTDDVSFHDVFSDVGIELQLDSLLEHHFNIKVVYNPFHNQVVCGECVNRLIELFDIEERFKEREAESIIGEREKIIVEHGTPSGSGNSTAATEQFTTEVKDEEVFSWDDQEIFEYVEFNTNEVSEVAAASVVTNKGFDKFQDFDLEIYADAIINSNLEELQLERESTCNVCFENFTKHQDLLMHIKKQHEHENGFYPCVLENCHKILKSERRLARHIVLKHYNLSEIPIFGACRDCGMTFSNFLDFNKHSCCTTLKYREKIPSYCSICNMKFPTFRRFRFHKQFHLEKRRPRVCLLCDRYFTDSEEFFEHVHYEHESEDRLICITCDRCFKNKKLFETHLANHNMELKYKCTLCHKAYTQNNRLQNHMESYHNSGDHLKCKFCNKILSNRDYFRNHMKLHEPEVDVQVNSCTTCALVGRDKIYLQEHTENRRSKCFKAPIEEEFLSVVYLCEYCDETFKSKVGLKNHRDTGIHIDKLFHCPLCSATFNELRKVRAHFKSHKIYEDWQKSFPLLRKFMCDVGDCQQSYAMWMSLCSHKAMKHKEIQLICTKCNRQFETKLDFDRHSEKCEKRDQHDCQFCGKKCTSKMSLSVHMARSHNNKNVNCTVCKASFKDNEILQKHIDFVHVQMECKLCHKIVKNQRNLLLHERVKHRNVKRYFCESCDKGFYNKSDMEAHERTAHSMTNFVCEKCPFTTNYKNSLDVHMAMHNNDLQYECPICGRHFARKRVMDLHVKRHEVHREFVCSDHVANGCPASFITRYLLKKHIKEKHTSNQETTGSAPKLKLGRRMYTKTTINADVEDIDADDPVAFPPNTSNRCQMYLCYNNYGEQVDELITDCIEVDMTFRDNNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -