Mtes008761.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- -
- Assembly
- GCA_943737955.2
- Location
- OX031314.1:64736834-64739139[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.27 34 6.3 3.2 2 23 288 310 287 310 0.94 2 13 0.0067 0.87 11.3 2.5 1 23 316 338 316 338 0.97 3 13 1.2e-05 0.0016 19.9 4.6 2 23 345 367 344 367 0.96 4 13 0.12 15 7.3 1.9 1 14 372 385 372 396 0.85 5 13 0.00056 0.072 14.7 8.1 1 23 401 423 401 423 0.98 6 13 0.00043 0.056 15.0 4.4 1 23 429 451 429 451 0.98 7 13 8.4e-07 0.00011 23.6 2.4 1 23 457 479 457 479 0.98 8 13 1.5e-05 0.002 19.6 0.3 1 23 485 507 485 507 0.98 9 13 3.2e-05 0.0041 18.6 2.2 1 23 514 537 514 537 0.98 10 13 0.00026 0.034 15.7 0.2 1 23 550 573 550 573 0.92 11 13 2.7e-05 0.0034 18.8 1.3 1 23 579 601 579 601 0.97 12 13 0.0018 0.23 13.1 1.4 2 23 610 631 609 631 0.92 13 13 0.16 20 7.0 0.7 1 16 637 652 637 654 0.88
Sequence Information
- Coding Sequence
- ATGGCGCTGGACTTTTGTTTCGACAGGAAAACGTTCCTCGAACAAATCTGTCGTGCTTGCAGCCGCTACTACAGCTGTGATGGTAACGATGATGAAAAAATGGAACTCTTTCGTATATTTGATGATGACAGAACGAATCTAAAATCTCAACTTGCCGCGGAAGCCATCAAAAGCGGAGATGAATCAACAGAATCAGATGCTAATGAAATGCTTATGGAAGAAATGAAGGAGATATTTCCAGAAATGATGATTTGGAATCTTAACATTAAACCAAGTGATGGACTGCCACAACAAATATGCAAAGATTGTATGGAACGCTTTCGAAGTGTCAAAATCTTCCGTGAGGAATGCCTCGACACTCAAAAGGTTTTAGAATCTTATTTCAAAGACTTTAGCTTACTTGTGGGTAAGTCCCCAAAATCGGaggaatcaataaaaattgaacCTGGAGTATCGCCGGTGCCGTCTTTTAATCCGGATGATCTCGTTGAGGAGGTGCCGGAATCACCGGAACATGCACAATCGTCCATGACTAGTCCTCAGCTGCGTCACAGTCCAAAATTTGGGGACCCTCCTTTCTATGCTGAAAGTTCAATTGGTACGCCACCTCCTTTATTTGAAGAAATCAAAACCGAGCCAATCGATGTACAAACAATGGAATTCATTAAAGCTGAGGAAGAGTTGGCACTGGCCCTCAAGACAGAAGATGAAATAAAAGTGGAATACGCTGGCGAATTAGGAATGAAAGCATTTAACAGCTTGGGTGCAGCTGCTGAATCTTATTGCAGCGATGAAGAATCCTCAGATATATCTGACGAGGGAACAGCTATATTTGGTGTCGATCAGCCACGCAGTCGCTTGCAATGCAAGATTTGCTTCGACATTTTTTCGAAACGATGTCTGCTTAAGGAACATCAACTACAAAGGCACCCAGAAGCCAGACCATATGCTTGCAATTTATGCTCTAGTACATTTAAATCGAATTTTACTCTTTCACAACACAAGCTGAAGCATAATCGCCTGGACAGAAAACGCTGCGATCTGTGTGGGAAATTTTTTCGCAGCCAACTGCATCTTCAGCGGCACATGAAGAACTTTCATCTCACATCGACGTACACATGTCACATTTGTCACCAAAAGTTCGAGCAGTACACGCAAATACGATTTCAGTACCACGTGCGACAGCATGGCGAGAAACGCTTTCATTGTCAATACTGCGAGAAATCCTTCCATCAGAAGATTCATTTGATAAACCACGAACGCACCCACACCAAGGAGCAGCCATTTCGATGCGACATTTGTGGCAAATCATATCGCCAGCAAACAGCGTGCCATGAACATATGTTAACACATTCGGACCCAAAACCCTTTAAGTGCAAAATTTGCGAAAAAGGTTTTACACAACGTTCGAGCCTGCGTTTACACTATCGTTTACACACTGGTAACAAACCATTCCGTTGCGAACTCTGCGGGCAGAATTTCGCACAAAAGGTTCAACTCGAAATGCATGAAATGACGCACAGTGACACATATCCCGGATATCAATGCGAAATATGCAACACAAAATTTCGCTTGCTTCATCAATTAACGACTCACATCAACATGCTTCACTCTACATCGGCGGTGGGTAAAAGTGTGAGTGATCATTACGTCTGTCAGCAATGCAATTCGGCTTTTGCAAATCAAGCTCATCTGCAAGCGCATGTTGAGGATGTACATTTGCCAAAGCGACAACATAGTTGTGTTTATTGCACTAAGACTTTTGTGCTAGCGGCTCAGCTAAAGGCGCACCTGAAGACCCACAACACGCATATTTACAAGACTTTAAGTTGCCAATATTGTGATAAATGCTATAATAGCAAAGAAGCCCTCGATCTGCACGAAGAGCAACATGCGGAGCGTGAGCAATTTAAGTGTAGTTTTTGCGAAGAatcgttttcgtatcgaatAACCTTGGGACGTAAGTTTCTGATTTAA
- Protein Sequence
- MALDFCFDRKTFLEQICRACSRYYSCDGNDDEKMELFRIFDDDRTNLKSQLAAEAIKSGDESTESDANEMLMEEMKEIFPEMMIWNLNIKPSDGLPQQICKDCMERFRSVKIFREECLDTQKVLESYFKDFSLLVGKSPKSEESIKIEPGVSPVPSFNPDDLVEEVPESPEHAQSSMTSPQLRHSPKFGDPPFYAESSIGTPPPLFEEIKTEPIDVQTMEFIKAEEELALALKTEDEIKVEYAGELGMKAFNSLGAAAESYCSDEESSDISDEGTAIFGVDQPRSRLQCKICFDIFSKRCLLKEHQLQRHPEARPYACNLCSSTFKSNFTLSQHKLKHNRLDRKRCDLCGKFFRSQLHLQRHMKNFHLTSTYTCHICHQKFEQYTQIRFQYHVRQHGEKRFHCQYCEKSFHQKIHLINHERTHTKEQPFRCDICGKSYRQQTACHEHMLTHSDPKPFKCKICEKGFTQRSSLRLHYRLHTGNKPFRCELCGQNFAQKVQLEMHEMTHSDTYPGYQCEICNTKFRLLHQLTTHINMLHSTSAVGKSVSDHYVCQQCNSAFANQAHLQAHVEDVHLPKRQHSCVYCTKTFVLAAQLKAHLKTHNTHIYKTLSCQYCDKCYNSKEALDLHEEQHAEREQFKCSFCEESFSYRITLGRKFLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -