Mtes003514.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- TAL1
- Assembly
- GCA_943737955.2
- Location
- OX031314.1:24992027-24998346[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00074 0.096 14.3 0.6 1 23 470 493 470 493 0.97 2 13 0.00075 0.096 14.3 0.4 2 23 499 521 498 521 0.94 3 13 0.00012 0.015 16.8 2.7 2 23 531 553 530 553 0.96 4 13 2.4e-06 0.00031 22.1 4.9 1 23 725 747 725 747 0.97 5 13 2.1e-05 0.0027 19.2 1.2 2 23 754 776 753 776 0.96 6 13 0.0058 0.75 11.5 6.4 2 23 783 805 782 805 0.96 7 13 6.4e-05 0.0083 17.6 3.6 1 23 810 832 810 832 0.97 8 13 0.00088 0.11 14.1 0.7 1 23 837 861 837 861 0.92 9 13 0.003 0.39 12.4 1.3 3 23 867 887 866 887 0.99 10 13 0.00011 0.014 16.9 1.4 1 23 893 915 893 915 0.98 11 13 1.4e-06 0.00018 22.9 2.6 1 23 921 943 921 943 0.96 12 13 4.1e-07 5.3e-05 24.6 1.8 1 23 949 971 949 971 0.99 13 13 0.059 7.7 8.3 0.2 1 23 976 999 976 999 0.96
Sequence Information
- Coding Sequence
- ATGGATTCACCAACTCCAAAACCGTCGGCAACAACCAACGGATCGTTAAATGTTCCCGGAACCGGAAGTGTAATTGCGGGAGCGGAGAAGACGTTGTTGCAATATGCGTACAATCTGCAAGTGCAACAGAAAAGTGAATCCATATCGGATGGTGATATGTctgatttttcattaaatgacTCGGAGGAGGACGAGGAGGAGTTCCGTAACTGCATCCTTAGTAATGGCAGTCATGGCGAAGCCTCATCTTCACATTCGCAAAATGCATCCCCACGCAACGGCAACGTATTGCAACCATCTCTGCACAGTAACTCATCCCCTACCACCGTTATTAACGGGCAAGTAGTAGGCGTGGTCCGCAAAGTTTTCACCAACACCCGTGAGCGTTGGCGCCAACAGAACGTCTCCGGAGCATTTGCTGAGCTCCGAAAACTGGTGCCCACGCATCCACCCGACAAGAAGTTGTCCAAAAACGAAATACTTCGCATGGCCATCAAGTACATTAAATTGTTAACGAGTGTTTTGGAATGGCAGAAGCAAGAGGAAGAGCATCGTTTTGTGGAGGCCGAAGAAAACgagcccaacaacaacagcaaacacatGATGAATGGACATGGACCACTAGTGGCGGCAAGTGGTAATTTGTTGGCCAACTGCAGAGATTTTCATGTCAGACCTGAACGCGCAGCACCAGCCATCAACGGTCAACgcaacaccagcagcaacaaccacaacaatcTGCTGATGATAGCGCCAGGCGCACTACTCCAGGGCACGATTAAAACGGAGTGCCTAGATGTTGGagaagctgctgctgttgttccaATGCTGCCAGTGGTTCAAGCTATACCATTGCAAAATCTGCATCGCACCATTACTATGGACGAGATACGCCCAcaaagcaaattaaacaaaacaactaAACGCAAACCGAACGGAAAAAATACTGAGCTTGACGGTGGAAAACGAAGGAAAGAAAGCGGAGTTGAAAAGCGGAACCGTTTCCAGGTCGAGCATAAGGCGGAAAGCTATGCGATGGCTTTAACTACGACGGTGGATATGGATAAAATCTGTCGAATTTGTTTAAAGAGTGAGCCTGAGCTTTACCTCATATTTGAACAGAAGTTTGCATTTAATAACGAGAGTTTGGCTACGATTTTAACAGAGTTAACGATGTACAAGGTCAATCGCTCCGATGAATTACCGCATCATATGTGTAGTAACTGCGTGGAGCTCGCTAAAAGCGCCTTCATTTTTAAACGAACCTGTGAGAAGGCTTATCGGCAGCTAATCGGCATGCTGGCACCTGACAACTGTAGCCCTGTACATGCAGCAACGTCAAGTGAGATTAAAATGGAAACCGAGTCATTGCTATTGGAAAAATCCACACAGACTGATTACAGCATGTATCCATGTGAGCGCTGCGAGCAGAAGTTCTTCACTTCCGATGCGCTGCGAATGCATCGGGAAACGGAACATAAGGGTAGCGCTATCGTGTGCCGCTTCTGCTCAAAATCGTTTAATCGAGTGGGTTACCTTAAGACGCATATCGCAGTGTTCCATCCAGAGTCTGGCTACACATCGCACAATCAATGCAGCATCTGCAAGAGGCAGTTCACCCGGCGCGAACACATGCGTCGGCATCTGGAGGTGATACACAAAATCGTAGAAATTGGAGATGCGCCCGGTTTGACTAATCGAGAGGATGATTCGTCGAAGAGCACTGAAGCAAGCAATGAACTGGAGGATGAGCTGGAAATAGTAGAAAATCATTGCGGAGGCAAATCCGAACTAGAAACTGATTTTAAGGCAATTGCTTCCATATCAAAGAGTTCTGCTAATCATACAAGACCTCCGGAAAGTGATGGCGAAAGGATAGCTGACAACTGCGATGTGAAACAATCATTAAGTGATGAAGAAGATGAGAAGCCGCTTTCAGAATTTATTCGTCTTCCACGTAAAAACTTTTTAGAAGTTTTAATTGATGAGGGCAGAAGTGATGAACAGCTGAACTCCAGCTTTGTAGATGTTCctaacaatattaaatttgaatatgAAGCTTCTCCAGAAAATGGTTTAGATGATGAATCGATTGCTGAACAGTGCAAAAAAGCGACAAAATTGCGAGCAATTGATTGCAGTTCTTCGATTGGCGAAAATGTACACAAAGAACACAAATGTACAACATGTGACAAAGTTTTCCGCAGGTTTTCAACGTTACAGCGGCACATGCTAAATCACAAACAGAAAAAGTCTCTCACATGCAAAATCTGCGCGAAGAGTTTTACTCGTACAGATTTCCTAAGGAATCACATGAATATCACACATGATCCTGCCAAGTCGATTAAGTGTGATGAATGCAACACCGAATTCACCCATTTCACACACTACAAGCGCCACAGAGAAACGAAGCACACCCTAAAAACGCATTCTTGCGACATATGCCAGAAGAGTTTTAGGACAAGACTCTACATGCAGCGGCACATGGAATCGCACAATAAGAAACGCTTCGTCTGTAAGGAGTGCTCGCAACGGTTTTTGACCAAAGACGAGCTGAAAACACACATAAAATCAGAGGGCCACGACAAGCCGCTGCTCTGTCCAGAGTGCGGCCTCCGTTGCAAAACCAGCAACATCCTGATGGTGCACATGCGCAGACACAAGGGCGAAAAACCGTTTAAATGCAAGTTCTGCAGTAAAGGCTTTCCGCGCATGGATGATTTGCGTATACATGAAAGATATCACACCGGCGAAAAGTCGCATTTCTGCGAAACGTGCGGTAAGGGATTTCAACGCAAATACAATCTCACAATACACATGCGTGTGCACACCGGTGAAAAGCCTTATAAGTGCGAATACTGTCCACATGCCTTCACACAGAGCAACGATTTGAAGGCGCACATACGACGTCACACCGGAGAACGGTTCCGCTGCGAAATATGTGGAGCTCCATTTTTGCAAGGCTACCAAATGCGCCAGCACAAACTAACCGAACACGGCGTCAAAGAGAGTCCGCCTACCCAACGTGTGGAAAAGTACACTTCGCCCGAGGAACAAGAGCAACAAATCAAACAGAACTTGCAACGCGAATTGGCCAAAAGCATACCATCAACGGGTGGAAAATCTGCTAAAGCTTTGGAGTCGCAGGAAAGTGCAAATGCATCGTCTAGTACAAATATATTGGAACCCTCGACAAATACACAAAAAGCCATGAGTTTCTTGAGCATTTAA
- Protein Sequence
- MDSPTPKPSATTNGSLNVPGTGSVIAGAEKTLLQYAYNLQVQQKSESISDGDMSDFSLNDSEEDEEEFRNCILSNGSHGEASSSHSQNASPRNGNVLQPSLHSNSSPTTVINGQVVGVVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRMAIKYIKLLTSVLEWQKQEEEHRFVEAEENEPNNNSKHMMNGHGPLVAASGNLLANCRDFHVRPERAAPAINGQRNTSSNNHNNLLMIAPGALLQGTIKTECLDVGEAAAVVPMLPVVQAIPLQNLHRTITMDEIRPQSKLNKTTKRKPNGKNTELDGGKRRKESGVEKRNRFQVEHKAESYAMALTTTVDMDKICRICLKSEPELYLIFEQKFAFNNESLATILTELTMYKVNRSDELPHHMCSNCVELAKSAFIFKRTCEKAYRQLIGMLAPDNCSPVHAATSSEIKMETESLLLEKSTQTDYSMYPCERCEQKFFTSDALRMHRETEHKGSAIVCRFCSKSFNRVGYLKTHIAVFHPESGYTSHNQCSICKRQFTRREHMRRHLEVIHKIVEIGDAPGLTNREDDSSKSTEASNELEDELEIVENHCGGKSELETDFKAIASISKSSANHTRPPESDGERIADNCDVKQSLSDEEDEKPLSEFIRLPRKNFLEVLIDEGRSDEQLNSSFVDVPNNIKFEYEASPENGLDDESIAEQCKKATKLRAIDCSSSIGENVHKEHKCTTCDKVFRRFSTLQRHMLNHKQKKSLTCKICAKSFTRTDFLRNHMNITHDPAKSIKCDECNTEFTHFTHYKRHRETKHTLKTHSCDICQKSFRTRLYMQRHMESHNKKRFVCKECSQRFLTKDELKTHIKSEGHDKPLLCPECGLRCKTSNILMVHMRRHKGEKPFKCKFCSKGFPRMDDLRIHERYHTGEKSHFCETCGKGFQRKYNLTIHMRVHTGEKPYKCEYCPHAFTQSNDLKAHIRRHTGERFRCEICGAPFLQGYQMRQHKLTEHGVKESPPTQRVEKYTSPEEQEQQIKQNLQRELAKSIPSTGGKSAKALESQESANASSSTNILEPSTNTQKAMSFLSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01022691;
- 90% Identity
- iTF_01022691;
- 80% Identity
- iTF_01022691;