Basic Information

Insect: Myopa tessellatipennis
Gene Symbol: -
Assembly: GCA_943737955.2
Location: OX031314.1:29640096-29642529[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.21 27 6.6 0.3 9 23 209 223 207 223 0.86

2 12 9.3e-06 0.0012 20.3 3.3 1 23 230 252 230 252 0.97

3 12 5.3e-06 0.00069 21.0 0.9 1 23 272 294 272 294 0.99

4 12 0.00015 0.019 16.5 1.7 1 23 309 331 309 331 0.97

5 12 6.1e-06 0.00078 20.9 1.7 1 23 337 359 337 359 0.99

6 12 3.9e-05 0.0051 18.3 3.9 1 23 365 387 365 387 0.99

7 12 1.2e-06 0.00016 23.0 0.9 1 23 393 415 393 415 0.95

8 12 0.00019 0.024 16.2 0.2 1 23 421 443 421 443 0.98

9 12 7.8e-05 0.01 17.4 0.6 1 23 449 471 449 471 0.96

10 12 0.0037 0.48 12.1 7.4 1 23 477 499 477 499 0.98

11 12 4.8e-07 6.2e-05 24.3 1.0 1 23 505 527 505 527 0.99

12 12 0.00022 0.028 16.0 0.5 1 23 533 555 533 555 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.21	27	6.6	0.3	9	23	209	223	207	223	0.86
2	12	9.3e-06	0.0012	20.3	3.3	1	23	230	252	230	252	0.97
3	12	5.3e-06	0.00069	21.0	0.9	1	23	272	294	272	294	0.99
4	12	0.00015	0.019	16.5	1.7	1	23	309	331	309	331	0.97
5	12	6.1e-06	0.00078	20.9	1.7	1	23	337	359	337	359	0.99
6	12	3.9e-05	0.0051	18.3	3.9	1	23	365	387	365	387	0.99
7	12	1.2e-06	0.00016	23.0	0.9	1	23	393	415	393	415	0.95
8	12	0.00019	0.024	16.2	0.2	1	23	421	443	421	443	0.98
9	12	7.8e-05	0.01	17.4	0.6	1	23	449	471	449	471	0.96
10	12	0.0037	0.48	12.1	7.4	1	23	477	499	477	499	0.98
11	12	4.8e-07	6.2e-05	24.3	1.0	1	23	505	527	505	527	0.99
12	12	0.00022	0.028	16.0	0.5	1	23	533	555	533	555	0.96

Sequence Information

Coding Sequence: ATGGAAATAGAACATTTGACGGAAAAACTGTTCGGCAAAACTTGCCGCACCTGTATGTGCAAGGAGGAGGAGAGCAGCCAAGTACTCCAATCCATTTACGAACCTCCTAATCAAAACCTGTCTGCCCGCATTGTTGACTTGTTGTGCAGCGCTATTCCTCAGTTGAAATTCCATGCAGCGGATGAACTACCTGAAGAAATTTGTGCGCAATGCATCAACAAAGTGCTTAGTGTTCATCAGTTCCAGCAAATGTGCATACATTCCGAAACTCATATGCGTAGCATGCTCGATTATAACATAGTGGAAGATAAGTTCTCCAATACGTCCGAAGTTTCCCCCACATTCGAAATAACAGCTGCAGATCCTTTACAAAGTGAAGTTGCTGACCGTATGGTTCTAATCGATTTCcgggaagaaataaaaaaacgtcTAAAAATGGAATTGCAGGGGGAAGAAGATAATCGGGCAAATTTTGCTTTCGAAGATTCCGCTAATTGCCAAATCAATAACTCAGGAAACGATGCAGAATCAGAGAATACAGACCATTATAATATGAAAGAAGCTAATGCTGTTGCAATTGGATATGACAGTGTAGATTACAAAACGGATCGAAGTGATAGCAAAGAGACGGAAAATTCAAAAAGTCTAAATCGCCATATGAACGTACATAAACCCGCTGGAAAACCGTATGAATGTTCCAACTGCAAATATCGATTCACAACGAAAGCGCATCTCAAACGACATGAAATAATCCACGACAGTGAGCTGGCAAACATATTTACACTTCCCGCTACTACTAACAACCCTGAAGGATACAAATGCAGTGATTGCCCTAGGCGTTTTGCCAAACGAGAATCCCTGTCTGCGCATAGACAATCACACCGGAAGATAACGAATGGCGCGGAAGATTCTCTGAATATGTTGTATGCATGCACATTGTGTccgaaacaatttaaaaaactcaATATGCTGACGCGACATTCACGCAATCATGAGGaaaacaaacatttcaaaTGCCATATTTGCGATAAGGCTTTTGGCTTGAATGCTCACCTAATCGATCATATTAATAAGCACAACGGTGTAAAGCCTTACGTCTGTAATTTTTGCACTAAAGCTTTTCAACAGTCCTGCACACTCAAAGATCACATCCGCACTCACACAGGTGAACAGCCATTTTTGTGTTCCGAATGCGGCAAGGCTTTCAACAGTTCAAGCAATATGAAGCAACACCTGTTGCGACACACTGGCGAAAAGCGCTATGAATGTCCCGAGTGTCCGAAAAAATTTCCTTGTCTAAGCGATCTTGCATCCCATCAAGCGGTACACAAGAAGGTAAAACCGCATGTGTGTGACGTTTGTGGTGCTGCATTTGGCAAACCCTATCAACTTAAAAAGCATAAAATGTATCACAACGGAGAAAAACCGCACAAATGCGAATACTGTGAAATGAGATTTGTTTGCGCTGATCATATGCGGCGGCACATGCGTACTCACACTGGAGAGAAACCTTACAAATGCAAATATTGCGAGCGTGCATTTGCCCAAAGTAACGACTTGGTAAAACATTTGCGGTCACATATTGgtgaaaatgtttataaatgtGAACTTTGTCCAAAAGCTTTTCGCTTAGCCACCGAATTACGTGAGCATTTTTCTCAGCATAAAAACGATGATGAGGAAACCCACGCTCGAAATTCACAAGCATTGATAGATGAAGTGAAACACGGCAGTCTTACCTCAAATGCTGAGACAACGAATATAAAGAATGCAAAATCTAATTaa
Protein Sequence: MEIEHLTEKLFGKTCRTCMCKEEESSQVLQSIYEPPNQNLSARIVDLLCSAIPQLKFHAADELPEEICAQCINKVLSVHQFQQMCIHSETHMRSMLDYNIVEDKFSNTSEVSPTFEITAADPLQSEVADRMVLIDFREEIKKRLKMELQGEEDNRANFAFEDSANCQINNSGNDAESENTDHYNMKEANAVAIGYDSVDYKTDRSDSKETENSKSLNRHMNVHKPAGKPYECSNCKYRFTTKAHLKRHEIIHDSELANIFTLPATTNNPEGYKCSDCPRRFAKRESLSAHRQSHRKITNGAEDSLNMLYACTLCPKQFKKLNMLTRHSRNHEENKHFKCHICDKAFGLNAHLIDHINKHNGVKPYVCNFCTKAFQQSCTLKDHIRTHTGEQPFLCSECGKAFNSSSNMKQHLLRHTGEKRYECPECPKKFPCLSDLASHQAVHKKVKPHVCDVCGAAFGKPYQLKKHKMYHNGEKPHKCEYCEMRFVCADHMRRHMRTHTGEKPYKCKYCERAFAQSNDLVKHLRSHIGENVYKCELCPKAFRLATELREHFSQHKNDDEETHARNSQALIDEVKHGSLTSNAETTNIKNAKSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -