Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_943737955.2
Location
OX031314.1:1050669-1056324[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.0065 0.84 11.3 0.1 2 23 463 485 462 485 0.95
2 19 0.033 4.3 9.1 4.6 1 23 492 515 492 515 0.93
3 19 0.0065 0.84 11.3 0.3 1 23 520 545 520 545 0.97
4 19 0.00027 0.035 15.7 1.5 3 23 578 598 577 598 0.97
5 19 0.0032 0.42 12.3 0.6 1 23 604 626 604 626 0.97
6 19 5.2e-05 0.0067 17.9 2.0 1 23 633 656 633 656 0.98
7 19 0.033 4.3 9.1 2.4 1 23 662 684 662 684 0.96
8 19 8.1e-07 0.0001 23.6 0.8 1 23 690 712 690 712 0.98
9 19 0.00086 0.11 14.1 2.8 1 23 719 741 719 741 0.96
10 19 0.15 19 7.0 1.8 1 23 747 769 747 769 0.96
11 19 0.00014 0.018 16.6 3.1 1 23 828 850 828 850 0.99
12 19 0.00023 0.03 15.9 0.8 1 23 856 879 856 879 0.96
13 19 0.00056 0.073 14.7 1.7 2 23 890 914 889 914 0.93
14 19 5.6e-05 0.0073 17.8 0.9 1 23 924 946 924 946 0.97
15 19 0.00015 0.019 16.5 2.4 1 23 954 976 954 976 0.98
16 19 0.001 0.13 13.9 0.9 1 23 982 1004 982 1004 0.97
17 19 0.029 3.8 9.3 0.5 2 21 1011 1030 1010 1033 0.86
18 19 0.0019 0.25 13.0 1.8 1 23 1039 1061 1039 1061 0.97
19 19 6.1e-06 0.0008 20.8 2.5 1 23 1067 1089 1067 1089 0.98

Sequence Information

Coding Sequence
ATGAGCCAATTGTCGCCATATAATATGCAATTGTTTTGCAGAATATGTCTCGACGCGCTGCGACCAGCCATCGAAACCATATATAATATTCATTTAGTCCCAAAGCTGACGGAAGTAATACTCGCGTGCACGACGCTCGATGTAAACGAGGACGCCGATTTCTATCCGAAGAACATGTGCCAGCTGTGCTATGAAAAACTAGAGGATTTTAGATCATTCCGAAGCACGGCTCTGCGATCCAACGAGGTGCTTCATGGCATCACCTGCGAAAAAAATAGgtgtgaaaaaagaaaagcgaTAGCTGAGACCGACAACAGCTCCCAAAACCAttcaaagaagaagaaaaaaccagAGGAAAATTACGATGGTCCGTTGGCTCTACGAGCCAAACTGGCGGTTCGTGGCATCACCCgccaaaaaagaaatagtgtgtgtgaaaaattaaaaccgaTAGCTGAGACAGATAACGCGTCCCAAAACCATTTAAAGGAAAAGCGGAATTCAGAGGAGAATGATTATAATTCATTGACTATGGTATCCAAACGGGTACTTCGTGGCATCACTAGCAAAAATAATAGTGagtgtgaaaaaataaaaccgatAGCTGAGACAGATAACGCGTCCCAAAACCATTTAAAGGAAAAGCTGAATTCAGAGGAGAATGATGATAATCCATTGACTACGGCATCCAAACGGGTGCTTCGTGGCATCACTAGCAAAAAAAATAGTGggtgtgaaaaattaaaaccgaTAGCTGAGAAAGATAACGAGTCCCAAAACTATTCGAAAGAAAAGGCAAAAGCAGAGGAGAATGACGATAATCTGTTGACTATGGTATCCAAACGGGTGCTTCGTGGCAtcactaacaaaaaaattagtgggtgggaaaaaataaaacctatAGCTGAGAAAGATAACCCATCCCAAAACCATTCAAAAGAAAAGCCAAAAGCAGAAGACAATGACGATGATTCGTTGGCTCTGCGATCCAAACGAGTACTTCGTAGTATCACCCGCGAAAAAAGAAATAGTGtgtgtgaaaaaataaaactgataGCTGAGACAGATAACGAATTCCAAAGCCATTTAAGGAAAACgcaagaagcagaagaaaattACGATGATGAATTGATTATTCCCGAATTGTCAACAGATTTCTTCGAAAAATCGACGATAGAAACCGCAAGCAAGGATTTTGAAGAGcaaggaaaagaagagaacCAAACAAATGTAATTTATCTTGAAAATCCggatgaaataaaaaattatcttGACTCGGAGGATGAAGAAAATACcgaattttatgaaaataacGCGCTTGGCACCAACTATCATTCCACCGAAGATGAATACgtcgaagaaaaaaaaatcactaAAAAATCACTAAAGTGCCCGCGTTGCGACAAGCAAGTCTATAAACAGGTCTACCTAGACGCACATATTCGTGCAGTTCATGAGGGCAATAAAAAACCTTTTCTCTGTAAGAAGTGCTGCAAATCATTTACTCGGTACAACAAGCTTCGCGAGCACATACAATTGGTGCATCTAAAAACCAAGTTTACATGTGACTTCGAAGGATGTGgggctatatttaatttacgGACCACTCTAAAGACACATCGCAAAGTTGTTCATTCAACTGACCCAACGTTGCCCTTTTCGCTTGACCTTCAGAAAATTCTAGAGTTGCACCAAGCTGAGCTCAACACGGAGATGGAAATGGACAACATATGCCAACAATGCGTTAAGAAATTTAGTTCAAAGACCGCCTTAACGGAGCATTTGAAAAGGCATGCAAACATCAAGGAACACATCTGTAAAGTGTGTGGTGCTGCTAAAGTTACTCGTTACGAACTTCTGACACATATGCGAACACACGATCCAAATACGGAGAAGTTTAAATGTACCATGTGTCCGCAAAAATTCAATCACAAGAACGCAATCCAGCGGCATATTCGCATAGTACACGAGGGCCTGCGTACCTTTTCGTGCAGCTATTGTTCAAAACGATTTGGTACGCGCACCTCCAAAGTAGGTCACGAACGACGTCATACCGGCGAACGACCTTTTGTTTGCGAGATCTGTCATAAGGGTTTTGTTCAACAGGGTGATCTTAAAATTCACATGAAGAACCACGATAAGAGCTTGCGTACTCATGTCTGTAAATATTGTTCGCGACGTTTCATGACGCGAAAGAATCTGATTGATCATGAAGCACGGCATCGCGGCGACAAACCGCACATTTGCGAGATATGCAATCACGGATTCTTTATACGTGCGGACTTGATATATCATCGGAGTTCGCATGTCAGTATAGGAGTAATTGAGTTGTTAGAGACAGCAAAGTCATCCGAGGCTGATGTACTTGAATTATGTTCAGGTAATGAATCTGAGACTTTTAAAGAAACCCTACCGAGAGAATTACCAAAGGAACTAGTGTACACAACTGCTTCAGAACATCCTAGGAAACCGCTGATTAAATTCCAATGCGAGTTCTGCACACGTCGCTGCAGAAATGAAGACACCCTGGCAACTCATATGCGGATTCATCTAGGCTTGCTACCCTACGAATGCAAGGAATGCCAACGATCATTTAACAAAGTTTCTCGGCTAAAGTTACACGTTCGTGAAGCGCACCAAACACAGGCAAACTCTACTCAGGTCACCACCTGTTCTTATGAGGGATGTGGAAAACAGTTCCGTCGCCTTGACACTTTCCGATCACACTACCGCCTAAAACATTCCGGCACTAAACCATTAGCCAAAACATACGTCTGCGAAGACTGTGGGCTCACTTTCAAAAATGTGACCACATTAAAGGAACATCGGTTTAGGCATCTGCCAGCCGAAGAATTGCCATATCAATGCGAACAGTGCGGAAAACGGTATATATCTCAGCGAACCTATAGAGAACACAAAATGCGTCATTCGGAGATCAAGAATTTCGTTTGCCCATATTGCGGCATGCGGAAGACCACGCGCAACGAGCTACGCACTCACATCAATTATCACACTAAAGAGAAGCAGTGGCCTTGTCATCATTGTCCAAGTGTGTTCAACAGTTCAGCTAATTTGGGCTTGCATGATCGTGTTGTTCACAAAGGAATTCGTCGATATGCCTGTCGTTATTGTGAGCAGAGTTTTGGCAAGGCAGAGACTTTGAAGCATCATGAAATGCGTCACACAGGTGAGAAACCACATGAATGCACACATTGTGGAAAGCGTTTCATTCAGGTAGTAGCATTGCGAGCACACCAGAAAACCCACAATAAGGTTAGAAATGACAATGCTACGACGGTTGTAAAGCAGTAA
Protein Sequence
MSQLSPYNMQLFCRICLDALRPAIETIYNIHLVPKLTEVILACTTLDVNEDADFYPKNMCQLCYEKLEDFRSFRSTALRSNEVLHGITCEKNRCEKRKAIAETDNSSQNHSKKKKKPEENYDGPLALRAKLAVRGITRQKRNSVCEKLKPIAETDNASQNHLKEKRNSEENDYNSLTMVSKRVLRGITSKNNSECEKIKPIAETDNASQNHLKEKLNSEENDDNPLTTASKRVLRGITSKKNSGCEKLKPIAEKDNESQNYSKEKAKAEENDDNLLTMVSKRVLRGITNKKISGWEKIKPIAEKDNPSQNHSKEKPKAEDNDDDSLALRSKRVLRSITREKRNSVCEKIKLIAETDNEFQSHLRKTQEAEENYDDELIIPELSTDFFEKSTIETASKDFEEQGKEENQTNVIYLENPDEIKNYLDSEDEENTEFYENNALGTNYHSTEDEYVEEKKITKKSLKCPRCDKQVYKQVYLDAHIRAVHEGNKKPFLCKKCCKSFTRYNKLREHIQLVHLKTKFTCDFEGCGAIFNLRTTLKTHRKVVHSTDPTLPFSLDLQKILELHQAELNTEMEMDNICQQCVKKFSSKTALTEHLKRHANIKEHICKVCGAAKVTRYELLTHMRTHDPNTEKFKCTMCPQKFNHKNAIQRHIRIVHEGLRTFSCSYCSKRFGTRTSKVGHERRHTGERPFVCEICHKGFVQQGDLKIHMKNHDKSLRTHVCKYCSRRFMTRKNLIDHEARHRGDKPHICEICNHGFFIRADLIYHRSSHVSIGVIELLETAKSSEADVLELCSGNESETFKETLPRELPKELVYTTASEHPRKPLIKFQCEFCTRRCRNEDTLATHMRIHLGLLPYECKECQRSFNKVSRLKLHVREAHQTQANSTQVTTCSYEGCGKQFRRLDTFRSHYRLKHSGTKPLAKTYVCEDCGLTFKNVTTLKEHRFRHLPAEELPYQCEQCGKRYISQRTYREHKMRHSEIKNFVCPYCGMRKTTRNELRTHINYHTKEKQWPCHHCPSVFNSSANLGLHDRVVHKGIRRYACRYCEQSFGKAETLKHHEMRHTGEKPHECTHCGKRFIQVVALRAHQKTHNKVRNDNATTVVKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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