Basic Information

Gene Symbol
TIGD4
Assembly
GCA_943737955.2
Location
OX031314.1:25165755-25177312[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 2.7e-08 6.7e-05 23.9 1.9 17 44 932 960 924 960 0.95
2 8 3.5 8.9e+03 -2.0 0.7 14 43 1180 1206 1174 1207 0.73
3 8 2.1 5.2e+03 -1.3 3.7 17 38 1238 1261 1229 1264 0.87
4 8 0.23 5.9e+02 1.7 0.6 17 29 1269 1281 1262 1293 0.71
5 8 1.2 3.1e+03 -0.6 5.0 16 43 1297 1321 1286 1322 0.77
6 8 0.04 1e+02 4.2 4.4 17 44 1384 1408 1358 1408 0.90
7 8 0.059 1.5e+02 3.6 1.7 17 40 1413 1433 1409 1436 0.86
8 8 0.017 42 5.4 1.6 18 43 1442 1464 1439 1465 0.91

Sequence Information

Coding Sequence
ATGCAGGATGAACAAGATATGCAGGTCCAACAACAcgtacaacaacagcaacaacaacagcccaCAGCGACCATTCAAGCTCAACAGATCAGCGTCGATCAGATCAGTGCCGAAAAGCTGACGCTCAACGATCTGCTACACTTCAAGACAGCGCGGCCGCGTGAGGAGATCATCCTGCAGATTAAGCATCCAACGGATACCACAGCGGCGCAAATAACGATTCCCTCCCCCACACGCATCACCATCCCAGCGCATCACCAGCAGCCGCAACAACACACAATGGCAACCAtcagatttCAGCAAGAGACACTGCATAATCAGTTACCTAGTAGAACCGAAGAGGACACTATTAGTGACCACGGTAATAATGATGAGTTTGTGTCCAGCGACTGCATATCACCAGTGTTAGATCCATTAGAATTGCAATTGAAATGTGAGCCAGAAGATCCCGATATAATTGCAGAAACAGTCAGTACACCGATCAACGATGAATATTCAATGCATGACTCCAATACAGAAAATTCTGGAACGACATCCAAAAAGCGACACGCTTTCACAATTGAAGAAAAAGCTGCAATCATTTCGGAATTGGATTCAGGTGCTTCAAAAGTAGCACTGTCAAAAAAATACGGTGTTACGCACTCAACAATCAGCACGAtttggaaaaataaagaagCCATCAAAAAGAGCTTTCAATCGAACTCcataaagagaaaaagaataaggTCACCTCAAATATGTGATGTGGAAGAAGCTCTGCTGAAATGGTTTCAGGTTCAAAGGAGTCAGAATGTGGCAGTAAATGGGCCAATGCTAAAAAAAGAAGCCGATAGAATTGCTAAACTTCTGGAAAAGAATTTTGTATGTAGTGAAAGTTGGCTTTATCGCTTTCGAAGGCGCAACAATATTATGTTGAGAAAAATTTCCAGGGAAGCTAGAAATGTCCAGTCAGAGCAGTGCGAAGATTGGCTCCTAAAAGTATGGCCCAAAATTCGGAATGAATATAAAATCAGTGACATTTTTAACATTGATGAGATCGGGTTGTTTTATAATCTGAAGCCAGATATATTAAAGCTGAGGAATGATGAATATATGGGCGGGGAAATGTCCGAGGAAAGAATTACGTTACTGGTGGGAACGAATATGGATGGctcagaaaagaaaaaacttctCGTAATTGGAAAATCTAAAACGCCCAAATGTTATAGTTCTTTCAAGTCACTCCCAGTTGAATATACAGCAAACAAAAAAGCTTGGATGACATCTTCTATTTTTGCAGAGTTTGTACGCAGCTGGGATTCGGAACTGAGGAAGCAATTCCGCAAGATTGTACTACTAGTCGATAACTGCTTTTCTCATCCTCAAGTGGACAATTTATATTCCATTAAACTGGTTTTCCTACCACCGAATGAAACTTCCATTTATCAACCAATGACTCAAGGTATAAGTAAAAGCTTGAAGAGTCATTTTCGAAAAAATCTACTTGTGAAAATGATTCGTGATGCAGAACTGGGTATTCGAACCAACGTAGCCTTGGTTGACGCAATTGACATGGCGGCAACGGCTTGGAATTGTGTAACTTCGACAACAATTTCCAACAGTTTCAAACACGCAGGACTCTTATCATCCGAAAATCCTCTCACTGTGACAGATTTGTTGAAGGCTGAAGAGGCTGATGTTCCCCTCTTAGATTGGATACGACAGCTTAAAAAGCTGAATATCGTTTCGATCTGGGAGGATTTCTTAACAGTTGATGATGATATCGAAACAACCGCAACGCCGACTTTAGAAGAAATCGTACAGACTGTAACCAAAAATCATCTTGACAGTACAGAGCTCAACCAAAATGaggatggtgatgatgacgatggtgGCGATGGTGGATGTGGACATGATGACTTTAAATTTCCTACAGTATCTGAAGCATTACATGCAATAGACATAGTAAGGAAATTCATTAACTACACCAATAGCTCCACAACATTACAAAACTCTGTTGTACAAATCGAACAACATTTGCAATCTATATTTATCCATGAAGAGGACCAACTATCTAATGTGCTAAATTATTGTCCCAAGCTAACGCAGAATGATAGCATCTCCACTACAATCTGCCAGAAATGCTGCAGTCAATTAGATGCGTTTCATAAATTCTGCTCCTACGTAGAGGAGCAGCAGAGTTCGCTGCGCAACACCTCGAGGAACATCAATAAATTATCGACAGTGAAGCCTGAAGTTCAGTTCAATATAACCGCCGTAAAACAACCAGAAAACACCGAAAGTGGTGGACGGAGTAGTGAGTACATGCTTAGTGACGTCAGCACGTCAACCCACCAGAAGTCAGTGGATGCAGAGCTCAAGTGTGAACCAGAAGAGCAACATAACATTTTTGTAGAAACTCTGGGAATGTGCAGCTCTGATGACAGACCAGTTCATCCTTCAAATCCTGAATTTTTTAGcacTGACATGATTGAAGATTTTACATCAGTGGATTACGATGCTTATCGAAATTTTTTAATCCGACAAAGTAACAAAATCGATTCTTCAGCAAACAGCCACGGCAACGATGTTGTGACAAGTGGTAAAAAGCAGCGGATACCATTACCATTATCATCATCCTTCTTACCTACCAGGATACCAACTATGAGCGAACATTTTTACGATCCATCTATCGAATCTAACAACTTCTATGAAGGAAATGGTTTCTCGAATATACTCTTTTCTAGAATTTTCTTTAGAGTCATAAAACAgCTTGATACCACAACCTTTCAACAGAAACGTGGTGGTGCCTTAGTTCAGTGCTGTTTCTGCGAATGCAAATTGAAGGGCTCAACTCAAGTCACCTCCAATTTAATACGAcatcttaaaattaaacatccTGAAGCGTTCGAGGAGTACAAAAGATTGAAGGCAGTAACACAGTATGATGCTATCTCCACCACGATCTGTCAGGATTGCTGCAGTCACCTGGACGAGTTCCAGAAGTTCTGCTCATTTGTGGAGGAAAAGCAAAGCATGCTGCATAAGGAATTTCTGGAAGTTAAATGCGACATTCAGCTGGGTGGAAACGAACTGAATGCACCGAATGAGGAATCACTATGTTACATTGGTGATATATTGGAGGTACCAACTGAGGTGCAACTAAAAAGTGAACCTCAAGAGCAGAATATCTTCGAAGAAATAGCTTTAGATCTTGTAGAAAGAAATGAGTCCTCAAATGATGATGTACCACTCGACGAGCTGCGGAAACGTCTAGTCAAAAGCAAgggaaaaggaaaacaaaagcaatccAAAACTAAAACGGCTAAAAAAGTGAAACCCTTAAGAAGGAGTAAAAGAGTCAAGGAACCATCATCCagtgataatgataatgataatcaTGCTAATGTTGAAACAGATGTTTCCAATGCAAACATTACCGAAACGTCAAACTCCATGCCTGACCCCCAAAAAGCTCCCCAAAAGCtcaaaatcaaacaaaacgaACAACTTATTTCACCCCTGCCGGATGAAGATATGGATAAGTTTATCGCTCAACATATGCAACTGAAATGTGATATTTGCGATATGCATTTGGAAAATTACAGTCAATTACGTCCACATTACAGGCAGCAACATAAACAGCGCGACTATATTCGCTGCTGCGGCAGTCGCCATCGCAAACGCAGAGAGATATACGAACACATTAAATGGCACTTAGATCCGGAATATTTTAAATGCAGTGTGTGTGGGAAACTGATGAAGAGCAGGAACTGTCTGGATATTCATACGATGACCAAGCATCATAAGCAAGAGGATCTAATCTACAGTTGCGAATACTGCAATAAACGCTTTCCGCGCCCGTCCATGCTAAACAGCCACACCAAAAATACGCATGAAGCTAAACGAACCTTCGTTTGTCAACATTGTAATAAAAGCTTCTTATTCAAGCACGCTTTAGCCAAACACATTCAGTCGCTGCATGACAACATTTTCCCGCACATCTGCGATGTTTGTGGCATGAAATTCAAGTTCAAGCCTTCATTTGAAACACATATCCTGCAGCATCAGGGTATCGTGGCGCCACCAGTCAAGTGTCCCGAATGCGGCGATTGGGTCAAGAATAAGAATCGCTTGCGTTTACATCTGACAACGCACAACAAAGTCGACGTTGACTGCAAATACTGTGGACGGGTCTGTGCCTCGCTCTCCGCCATGCGCGCTCACATCCAGTACATGCATCGACGTGCGGCAAGCTATAGGTGTACCTATTGTGAGAAATGCTTTAAGACTCCTAAAAACTTAAAGGAACACATCGCCACTCACACCGGCGTGAACCTTTACAATTGTCCGCACTGCTCCAAAGAGTTTCGCTCCAGTGCAAATATGTACGTGCACGTCAAACGGCAACACACACAACAATGGCTGAACTCTCGAGCACAAGCTGGCGAAGGAAAGATGTTCCCGAAGCCTCAAGAAAGCCCCCAGGCGACGAGTTAG
Protein Sequence
MQDEQDMQVQQHVQQQQQQQPTATIQAQQISVDQISAEKLTLNDLLHFKTARPREEIILQIKHPTDTTAAQITIPSPTRITIPAHHQQPQQHTMATIRFQQETLHNQLPSRTEEDTISDHGNNDEFVSSDCISPVLDPLELQLKCEPEDPDIIAETVSTPINDEYSMHDSNTENSGTTSKKRHAFTIEEKAAIISELDSGASKVALSKKYGVTHSTISTIWKNKEAIKKSFQSNSIKRKRIRSPQICDVEEALLKWFQVQRSQNVAVNGPMLKKEADRIAKLLEKNFVCSESWLYRFRRRNNIMLRKISREARNVQSEQCEDWLLKVWPKIRNEYKISDIFNIDEIGLFYNLKPDILKLRNDEYMGGEMSEERITLLVGTNMDGSEKKKLLVIGKSKTPKCYSSFKSLPVEYTANKKAWMTSSIFAEFVRSWDSELRKQFRKIVLLVDNCFSHPQVDNLYSIKLVFLPPNETSIYQPMTQGISKSLKSHFRKNLLVKMIRDAELGIRTNVALVDAIDMAATAWNCVTSTTISNSFKHAGLLSSENPLTVTDLLKAEEADVPLLDWIRQLKKLNIVSIWEDFLTVDDDIETTATPTLEEIVQTVTKNHLDSTELNQNEDGDDDDGGDGGCGHDDFKFPTVSEALHAIDIVRKFINYTNSSTTLQNSVVQIEQHLQSIFIHEEDQLSNVLNYCPKLTQNDSISTTICQKCCSQLDAFHKFCSYVEEQQSSLRNTSRNINKLSTVKPEVQFNITAVKQPENTESGGRSSEYMLSDVSTSTHQKSVDAELKCEPEEQHNIFVETLGMCSSDDRPVHPSNPEFFSTDMIEDFTSVDYDAYRNFLIRQSNKIDSSANSHGNDVVTSGKKQRIPLPLSSSFLPTRIPTMSEHFYDPSIESNNFYEGNGFSNILFSRIFFRVIKQLDTTTFQQKRGGALVQCCFCECKLKGSTQVTSNLIRHLKIKHPEAFEEYKRLKAVTQYDAISTTICQDCCSHLDEFQKFCSFVEEKQSMLHKEFLEVKCDIQLGGNELNAPNEESLCYIGDILEVPTEVQLKSEPQEQNIFEEIALDLVERNESSNDDVPLDELRKRLVKSKGKGKQKQSKTKTAKKVKPLRRSKRVKEPSSSDNDNDNHANVETDVSNANITETSNSMPDPQKAPQKLKIKQNEQLISPLPDEDMDKFIAQHMQLKCDICDMHLENYSQLRPHYRQQHKQRDYIRCCGSRHRKRREIYEHIKWHLDPEYFKCSVCGKLMKSRNCLDIHTMTKHHKQEDLIYSCEYCNKRFPRPSMLNSHTKNTHEAKRTFVCQHCNKSFLFKHALAKHIQSLHDNIFPHICDVCGMKFKFKPSFETHILQHQGIVAPPVKCPECGDWVKNKNRLRLHLTTHNKVDVDCKYCGRVCASLSAMRAHIQYMHRRAASYRCTYCEKCFKTPKNLKEHIATHTGVNLYNCPHCSKEFRSSANMYVHVKRQHTQQWLNSRAQAGEGKMFPKPQESPQATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01023362;
90% Identity
iTF_01023362;
80% Identity
iTF_01023362;