Basic Information

Gene Symbol
kn_1
Assembly
GCA_943737955.2
Location
OX031315.1:27991954-28006160[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-96 1.4e-91 308.8 0.1 249 385 52 188 44 190 0.98
2 2 2.4e-10 4.8e-06 26.3 9.1 422 499 191 273 187 280 0.74

Sequence Information

Coding Sequence
ATGAGTAATAGGAATTCTACAATCATAGCTAAGTTGTCTACAGCAGATGATCGTCGTAATCTCTTCAGAGCTATTGCAGCATTTCGCAAAGAGAATAAACGTCAGTTAATGTTAGCCGACCTTGGTATCCAAGGATTGTATCCACCACTTCCTGTAGCCACGCCATGCATCAAAGCCATATCACCAAGTGAGGGTTGGACTACTGGTGGCGCTACCGTTATTATAGTCGGCGATAATTTTTTCGATGGACTTCAAGTAGTTTTCGGTACAATGCTAGTCTGGAGTGAGTTAATAACTTCTCATGCTATTCGTGTCCAAACACCGCCCCGTCATATACCAGGCGTAGTAGAGGTGATCTTGTCATacaaaagcaaacaatttTGTAAAGGATCACCTGGCAgatttgtttatgtttCCCTCAATGAACCGACAATAGATTACGGTTTTCAGCGCCTACAAAAGCTTATACCACGTCACCCGGGGGACCCTGAAAAGTTGCAAAAGGAAATTATTCTTAAAAGAGCAGCTGATTTAGTTGAGGCATTGTATTCAATGCCAAGGTCTCCAGGTGGTAGTACTGGGTTTAATTCTTATGCCGGCCAATTAGCAGTAAGTGTTCAGGATGGGACCGGCCAATGGACAGAAGATGACTACCAAAGAGCACAGTCAAGCAGCGTTAGTCCGCGCGGCGGATATTGTAGCAACACGTCAACTCCCCATTCCTCAGGAGGATCTTACGGTGCTACCACTGCCGTCGCTAATAGCTACGGAACTCCACCTATGGGTACGTTACCATCTTCAGCAGGCAGTGTTTTCAACACTACAACGAGTAAGCAAcgcatttaa
Protein Sequence
MSNRNSTIIAKLSTADDRRNLFRAIAAFRKENKRQLMLADLGIQGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVILSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSNTSTPHSSGGSYGATTAVANSYGTPPMGTLPSSAGSVFNTTTSKQRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-