Basic Information

Gene Symbol
Arid4b
Assembly
GCA_943737955.2
Location
OX031314.1:69572918-69574736[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-29 4.1e-25 89.1 0.1 1 88 297 382 297 383 0.95

Sequence Information

Coding Sequence
ATGTCTTTTTCTTCACAGCAAGTGGACGATCCTCCGTCCCTACCCGTTGGTACGGAAGTTAGCGCTAAATACAAAGGAGCCTTCTGCGAAGCGAAGGTCAGCAAAGTTGTACGCAATATAAAAGTCAAAGTCGCTTTTAAACATGGTCTTGGATCGGGCATAGTATCGGATGATGCCATCAAATCTGGATTGTTACGAGTTGGTGGTGTAGTAGAAGTAAAACATCCAGATCGCAAAGATACTGTCGAAGCCACAGTGACTAAGGTCCAGGACTGTTCGCAATATACGGTCGTTTTCGATGACGGCGATATAACCACTTTGAGACGCACTGCGTTGTGTCTGAAGAGTGGACGACATTTTAATGAGAGTGAGACATTGGATCAGTTGCCGCTTACACATCCGGAACATTTTGGCAATCCTGTTGTTGGCGGGCGACGTGGTCGGCGTCGTCACATGAACGACGACAGCTCGGATGATGAGGAGGAAAGCGACACCAAGGAGGTGGTAAATGAGAAGGAGGAGCACATTGGCAAAGTTGTGTGCGTAGACACGGAATCGAAGAAGAAAGACAAGGAGAAGTGGTTTCCGGGCTTAGTAGTATCACCCAATGCACAGGCGACTGTGCGTATACGTGTCAAGGACGAATATTTGGTGCGCTCGTTTAAAGATGGGCGTTATTATACGGTCCCAAAAAAAGAAGCCAGCGAATTCACACGGGAAGCTGCAGCAAAGCAAGATGGGCCAGCTGTACAAGCAGCTTTGGAATATCTGGACAGCGATGTTCTACCGGCGCATTGGGATCGCGATGCTCTTTTTGATCTCAGCAATTCGTCCAGTGAAGAGGGTGCTGAAATGGATTCCGATTCGTCGGATGATGAGCCCCGCGAGGAAAAGGATCGGTTTGTGGCGCAACTATACAAATATATGGACGACCGTGGCACTCCCCTGAACAAAGTTCCCTCTATACAGAGTCGCGACGTAGATTTGTATCGCCTCTTCCGCGCTGTGCAGAAACGTGGTGGCTACAATCGTGCTACTACACAAAACCAATGGAAATCAATCGCTATCCGTTTAGGCTTCACCCCCGTCACTGTTAGTGTGGCGAATCTTGTTAAGCAGGCCTACAAGAAGTTTCTTCAACCATACGGCGAATTTCATCGCAAGCTGGGTTGCTCCATGCTCATGACTCCGCGGAACTCGAACCGCAGCAAGGGACGAAGTTTGGTGCGTGCTAATTCTGTTGCATCTCCGAAACCTGTAGAGACATCAAATAAAGACAGCTCCGCCACGTCGATCAGTGTTCTAACAAAGTTGGCGTCGGTTTCCACACAGCATCCAAGCACTTCAGGTGCCAGCACCACTGTCAGCGCCGCCAACGTTCCTTTAGCAGTTGCAGCTTCAACGGTCGCTTCAGTGCCGTCATCAGCTTCTGCTTTACAGTCAGCTACTGAAGAATCGGAAAATACCAGCGAATCCAGtatcgaaacgtcaaaaactAAGCGCAAGTCTTctaccagcaacagcaaagtCAAATCCCTTATAGAGAAATATGAGGAAAAAGTATCTTCGTTGATTAAAGATGATGGTGATGTGCCGCTGGCGAAGATGAAAGCCGCAGCGGCAGCTTCATCGCGTGCAGAGGAAAAGGATCTTACGACGCCCAGCACTGTCATAATTGTTAAAGACATTTCTGCAGTCCAGATTGCATCAACGGTCAGAGAAACTTCACCAACAGGTGAGTCAGAGTga
Protein Sequence
MSFSSQQVDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAFKHGLGSGIVSDDAIKSGLLRVGGVVEVKHPDRKDTVEATVTKVQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRHMNDDSSDDEEESDTKEVVNEKEEHIGKVVCVDTESKKKDKEKWFPGLVVSPNAQATVRIRVKDEYLVRSFKDGRYYTVPKKEASEFTREAAAKQDGPAVQAALEYLDSDVLPAHWDRDALFDLSNSSSEEGAEMDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRATTQNQWKSIAIRLGFTPVTVSVANLVKQAYKKFLQPYGEFHRKLGCSMLMTPRNSNRSKGRSLVRANSVASPKPVETSNKDSSATSISVLTKLASVSTQHPSTSGASTTVSAANVPLAVAASTVASVPSSASALQSATEESENTSESSIETSKTKRKSSTSNSKVKSLIEKYEEKVSSLIKDDGDVPLAKMKAAAAASSRAEEKDLTTPSTVIIVKDISAVQIASTVRETSPTGESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01055007;
90% Identity
-
80% Identity
-