Basic Information

Insect: Mylabris variabilis
Gene Symbol: -
Assembly: GCA_037464815.1
Location: JAZBGW010000464.1:10975-12593[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0057 0.34 11.4 5.3 1 23 60 82 60 82 0.98

2 15 0.0065 0.39 11.2 2.5 2 23 88 109 88 109 0.98

3 15 0.042 2.5 8.7 6.2 1 21 115 135 115 137 0.93

4 15 2.9e-06 0.00017 21.8 0.8 1 23 143 165 143 165 0.98

5 15 2.1e-05 0.0012 19.1 1.5 1 23 201 223 201 223 0.99

6 15 0.00023 0.014 15.8 1.4 1 23 228 251 228 251 0.97

7 15 9.7e-05 0.0058 17.0 0.4 2 23 255 276 255 276 0.96

8 15 0.00044 0.026 14.9 1.6 3 23 285 306 283 306 0.95

9 15 1.9e-06 0.00012 22.3 3.2 1 23 313 335 313 335 0.98

10 15 1.9e-05 0.0011 19.2 3.2 1 23 339 361 339 361 0.95

11 15 1.1e-06 6.6e-05 23.1 3.4 1 23 367 389 367 389 0.98

12 15 0.00024 0.014 15.7 3.8 1 23 395 417 395 417 0.98

13 15 0.00012 0.0073 16.7 3.5 1 23 423 445 423 445 0.99

14 15 0.00035 0.021 15.2 2.9 1 19 451 469 451 471 0.96

15 15 0.0085 0.51 10.9 4.3 1 23 488 511 488 511 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0057	0.34	11.4	5.3	1	23	60	82	60	82	0.98
2	15	0.0065	0.39	11.2	2.5	2	23	88	109	88	109	0.98
3	15	0.042	2.5	8.7	6.2	1	21	115	135	115	137	0.93
4	15	2.9e-06	0.00017	21.8	0.8	1	23	143	165	143	165	0.98
5	15	2.1e-05	0.0012	19.1	1.5	1	23	201	223	201	223	0.99
6	15	0.00023	0.014	15.8	1.4	1	23	228	251	228	251	0.97
7	15	9.7e-05	0.0058	17.0	0.4	2	23	255	276	255	276	0.96
8	15	0.00044	0.026	14.9	1.6	3	23	285	306	283	306	0.95
9	15	1.9e-06	0.00012	22.3	3.2	1	23	313	335	313	335	0.98
10	15	1.9e-05	0.0011	19.2	3.2	1	23	339	361	339	361	0.95
11	15	1.1e-06	6.6e-05	23.1	3.4	1	23	367	389	367	389	0.98
12	15	0.00024	0.014	15.7	3.8	1	23	395	417	395	417	0.98
13	15	0.00012	0.0073	16.7	3.5	1	23	423	445	423	445	0.99
14	15	0.00035	0.021	15.2	2.9	1	19	451	469	451	471	0.96
15	15	0.0085	0.51	10.9	4.3	1	23	488	511	488	511	0.95

Sequence Information

Coding Sequence: ATGGAAATTCTGGatgaaattgcaataaaatcgGAGATAAAACAAGAACCATGTGAAATAATCGATGAAAATCCAgaaattgattgtaaaatcGAAGAAACTAatagtgataatgataataacgatTTAAAGACAATTGAGGatactttaattaaattagagaaTGATACAACAGCATACCGTTGTAATTTATGtgagaaaattttcgaaaaattccacaattataaaatccataaaaaacaacattttatcGAGAAACGTACATGTAAACTGTGTACACTCGTATGCCAATCAATCAGTAAATTACAAGTACATATGAATACACATTTAGGTATAAAACCGTTTAAATGTAATGAATGTAATAAGAGTTTTGTGTGTAACAATCAATTACGGCTACATGCACGATGTCATTCGACCgagaaaaaatacatttgtAATAAATGCAATGAAGCATTCCGTTATTTAGGCTCGTTAAGAAGCCATATGATGCGCCACaataatgttaaattaaacGAATTCAAATGCCAGGATTGTGGACATAGTTCGTTAACACTACAAAGTCATCACAAACACCTGAAAATTCACGGTAGaaatatcgaatttaaatgtGAATTGTGCAAGGCGACTTTCAATAATGACCGCAATCTACAAACTCATCTGAATACGCATAAAGAATTACAATTTCCTTGTGAATATTGTAAACGTATCTATCAATCGTTGTATCGTTTAAAACGGCATATAAAACGCGCCCATATACCGAACGTGTGCGATCAATGCAATGAAATCTTCTACGATCGTTCATTATATACGAAACATATAAAAGAacatattaacaataaacaatcatCGATTTGTCAATATTGTAATAAGAAATTCGATAAATTCAAGAATCTAAGCGAACATGTACGTTTACAACACAAAAACGATGGTAATCGACACGAATGTAATCTATGCGAGAAAACATTCATAAATTCATCGTTATTACGCAATCATAGAAAAACACAcgataaatgttttatttgtaaacaTTGTAATAAACAATTCAGTTCACGTTACAATTTAGAGATACATAATGTAACGCACACAGGTGAGAAGAATCATAAATGTTTAGAATGTGGTAAATCGTATACGACCAAGACGAGTTTAAAGAATCATCAAGCTACACACACCGAtattcgtaattataaatGCGAACAATGTACGAAAACGTTTAAAACAAATCGTCGATTATACGTTCATAAATTATCGCATGCTGTCGATGAGAAATACGAATGTGATGTATGCCATGCGAAATTCCGggttaaacaatatttaaaatatcataTGAATAAACATTCGAATATTAAACCGTACGAATGTAAATTGTGTAATAAATCGTTTAAACATAAGAAATCATGGTTGAAACATTCCGAACATGATCGTTATGAGAATCTGGCCGAATTACGTAGTAAAATTGGAGATTTTCATTGTGATTTGTGTAAGATTCGTTTTGAGAATCGTACGAATTATTTAGAACACCAACGTTTCAAACATTCCACTGATAACAATgagattattgttaaataa
Protein Sequence: MEILDEIAIKSEIKQEPCEIIDENPEIDCKIEETNSDNDNNDLKTIEDTLIKLENDTTAYRCNLCEKIFEKFHNYKIHKKQHFIEKRTCKLCTLVCQSISKLQVHMNTHLGIKPFKCNECNKSFVCNNQLRLHARCHSTEKKYICNKCNEAFRYLGSLRSHMMRHNNVKLNEFKCQDCGHSSLTLQSHHKHLKIHGRNIEFKCELCKATFNNDRNLQTHLNTHKELQFPCEYCKRIYQSLYRLKRHIKRAHIPNVCDQCNEIFYDRSLYTKHIKEHINNKQSSICQYCNKKFDKFKNLSEHVRLQHKNDGNRHECNLCEKTFINSSLLRNHRKTHDKCFICKHCNKQFSSRYNLEIHNVTHTGEKNHKCLECGKSYTTKTSLKNHQATHTDIRNYKCEQCTKTFKTNRRLYVHKLSHAVDEKYECDVCHAKFRVKQYLKYHMNKHSNIKPYECKLCNKSFKHKKSWLKHSEHDRYENLAELRSKIGDFHCDLCKIRFENRTNYLEHQRFKHSTDNNEIIVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00814566;
90% Identity: -
80% Identity: -