Basic Information

Insect: Mylabris variabilis
Gene Symbol: -
Assembly: GCA_037464815.1
Location: JAZBGW010000848.1:558-5087[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.21 13 6.5 1.4 1 23 8 31 8 31 0.97

2 32 0.012 0.73 10.4 5.7 1 23 37 59 37 59 0.97

3 32 1.3 80 4.0 6.3 2 23 61 82 60 82 0.97

4 32 7.2e-05 0.0043 17.4 1.0 1 23 88 111 88 111 0.93

5 32 0.013 0.76 10.3 1.6 1 23 115 137 115 137 0.96

6 32 2e-05 0.0012 19.2 5.7 1 23 147 170 147 170 0.97

7 32 4.7e-05 0.0028 18.0 0.2 1 23 176 198 176 198 0.98

8 32 6.9e-05 0.0041 17.4 3.8 2 23 205 226 205 226 0.98

9 32 5.9e-07 3.6e-05 23.9 2.1 1 23 232 254 232 254 0.98

10 32 0.033 2 9.0 0.6 1 23 275 298 275 298 0.95

11 32 0.027 1.6 9.3 3.3 1 23 304 326 304 326 0.93

12 32 0.42 25 5.5 4.6 2 23 328 349 327 349 0.95

13 32 7.4e-05 0.0044 17.4 0.6 1 23 355 378 355 378 0.96

14 32 0.0018 0.1 13.0 0.3 2 23 383 404 382 404 0.97

15 32 7.9e-05 0.0047 17.3 3.8 1 23 414 437 414 437 0.96

16 32 0.0009 0.054 13.9 0.5 1 23 444 466 444 466 0.95

17 32 1.5e-06 8.7e-05 22.7 1.3 2 23 473 494 472 494 0.97

18 32 4.2e-08 2.5e-06 27.6 0.7 1 23 500 522 500 522 0.98

19 32 5.1e-06 0.0003 21.0 3.2 3 23 556 576 555 576 0.99

20 32 5.9e-05 0.0036 17.6 5.4 1 23 586 609 586 609 0.98

21 32 0.00042 0.025 15.0 0.2 1 23 616 638 616 638 0.98

22 32 4.8e-07 2.9e-05 24.2 0.6 2 23 645 666 645 666 0.97

23 32 8e-07 4.8e-05 23.5 0.4 1 23 672 694 672 694 0.98

24 32 0.0052 0.31 11.5 2.8 2 20 710 728 710 731 0.93

25 32 0.2 12 6.5 4.0 1 16 737 752 737 755 0.92

26 32 5.8e-05 0.0035 17.7 0.8 1 23 765 787 765 787 0.98

27 32 0.012 0.72 10.4 2.1 2 23 794 816 793 816 0.90

28 32 0.005 0.3 11.6 1.6 3 23 824 844 823 844 0.99

29 32 0.00045 0.027 14.9 3.1 2 23 855 877 854 877 0.97

30 32 0.012 0.72 10.4 0.2 1 23 884 906 884 906 0.97

31 32 8.5e-06 0.00051 20.3 2.6 1 23 912 934 912 934 0.98

32 32 1.5e-05 0.00092 19.5 2.1 1 23 940 962 940 962 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.21	13	6.5	1.4	1	23	8	31	8	31	0.97
2	32	0.012	0.73	10.4	5.7	1	23	37	59	37	59	0.97
3	32	1.3	80	4.0	6.3	2	23	61	82	60	82	0.97
4	32	7.2e-05	0.0043	17.4	1.0	1	23	88	111	88	111	0.93
5	32	0.013	0.76	10.3	1.6	1	23	115	137	115	137	0.96
6	32	2e-05	0.0012	19.2	5.7	1	23	147	170	147	170	0.97
7	32	4.7e-05	0.0028	18.0	0.2	1	23	176	198	176	198	0.98
8	32	6.9e-05	0.0041	17.4	3.8	2	23	205	226	205	226	0.98
9	32	5.9e-07	3.6e-05	23.9	2.1	1	23	232	254	232	254	0.98
10	32	0.033	2	9.0	0.6	1	23	275	298	275	298	0.95
11	32	0.027	1.6	9.3	3.3	1	23	304	326	304	326	0.93
12	32	0.42	25	5.5	4.6	2	23	328	349	327	349	0.95
13	32	7.4e-05	0.0044	17.4	0.6	1	23	355	378	355	378	0.96
14	32	0.0018	0.1	13.0	0.3	2	23	383	404	382	404	0.97
15	32	7.9e-05	0.0047	17.3	3.8	1	23	414	437	414	437	0.96
16	32	0.0009	0.054	13.9	0.5	1	23	444	466	444	466	0.95
17	32	1.5e-06	8.7e-05	22.7	1.3	2	23	473	494	472	494	0.97
18	32	4.2e-08	2.5e-06	27.6	0.7	1	23	500	522	500	522	0.98
19	32	5.1e-06	0.0003	21.0	3.2	3	23	556	576	555	576	0.99
20	32	5.9e-05	0.0036	17.6	5.4	1	23	586	609	586	609	0.98
21	32	0.00042	0.025	15.0	0.2	1	23	616	638	616	638	0.98
22	32	4.8e-07	2.9e-05	24.2	0.6	2	23	645	666	645	666	0.97
23	32	8e-07	4.8e-05	23.5	0.4	1	23	672	694	672	694	0.98
24	32	0.0052	0.31	11.5	2.8	2	20	710	728	710	731	0.93
25	32	0.2	12	6.5	4.0	1	16	737	752	737	755	0.92
26	32	5.8e-05	0.0035	17.7	0.8	1	23	765	787	765	787	0.98
27	32	0.012	0.72	10.4	2.1	2	23	794	816	793	816	0.90
28	32	0.005	0.3	11.6	1.6	3	23	824	844	823	844	0.99
29	32	0.00045	0.027	14.9	3.1	2	23	855	877	854	877	0.97
30	32	0.012	0.72	10.4	0.2	1	23	884	906	884	906	0.97
31	32	8.5e-06	0.00051	20.3	2.6	1	23	912	934	912	934	0.98
32	32	1.5e-05	0.00092	19.5	2.1	1	23	940	962	940	962	0.99

Sequence Information

Coding Sequence: ATGGCGACAGATAACAAGGGCTACAAGTGTTTTTACTGTGAAAATGTTTACCAGATTAAATGGTATTGGCAACAGCATATGATCAAAAAGCACGAGGAACATCGGCCCCATTCGTGTCTAATTTGCCATGAAAgatttaaattccaaaaagAATACAAAATACATAGACAAATCCACAAACAGTGCCCCATTTGTCAAAAACAACTGAAACATTTCTTCAGTTTATCATGCCATATTCGTAAACATTCCGACGATGCCAAATTCACTTGTGACATATGCGGAAAAAGTTATGTGTTTGAAAATAATCTTAAATGGCATAAGATCCACGCTCATGAAACTGTGCATGTTTGTGAAATTTGTGGTAAATCTATTAAGAGTAAAGGTGCCTTTGACTGTCATATGATAACCCATGAAAaagattataatgaaaaattggaCTTTAAATGTGAAATTTGTTCACGTGTTTTTAGACAGAAAAGACATTTAGATCGTCATATTCGACATAATCATAAAGATCGGCAGACGTACGTATGTGACTTATGTGGCAAAACATTGTCAACTAAACGCGGTTTAGAAGACCATAAAAATGTTCATAAAGGCATTAAGTTGAAtgaatgtaaattttgtgGTAGAAAATTCACCCGTCATAATACTTTAGTAGATCACTTACGGACACACACTGGCGAACAACCTTTCAAATGTAACCATTGCGATAAAGCTTTTTCTCAACGGACAGCATTACAAATTCATGTACGTTTACATACTGGCGAACGACCCTATTCGTGtgatatttgtcaaaataaaatCGAAACCAATGACGGTTATAAATGCCCTTACTGTGACAACATTTACCAGATTAAATGGTATTGGCAACAGCATATGGTGAGAAAACACGAGGAACATCGACCACATTCTTGTATAATTTGTCAAGAAAGATTTAAGCGTCGAGAAGAATACAAATTACATAGACAAAGTCATAAACAGTGTAGTATTTGTCAAAAGGAATTTTCCTCTTTCTTCAGATTATCGTGCCACATTCGTCAACATTTTAAAGATTACAGATTCTTTTGTGATATTTGTGAGAAAGGTTTTGTGGTGCAAAGTCGCCTGAAACAGCACCAAAGAAACGTGCATGGAGCTCGTTTAGTTTGCGATATTTGTGGTACATCGATTAAGAGTAAAaatatctttgaaaatcatatGAGAACACATGAAAAAGATTATAATGAGAAACGGGATTTCAAATGTGAATTTTGTTCACGTGCTTTTCGACAAAAAAGACACTTGGACCGTCACATTAAGGGCAGTCATAATGAAAATCGTCGAAAGCACATCTGTGACTTGTGTGGTAAAGTTTTATCTAATGAACGAAGTTTGACGGAACATAAAAATGCCCATAAAGGTATTAAAACGGTTGAATGTAAATATTGTGGTAGAAAATTTAATCGTAAAAACACCCTAGTGGATCATTTACGGACACATACTGGCGAACAACCCTTTAAATGTACTTACTGTGGTAAAGCTTTTTCTCAACGATCTGCTTTGCAGATTCATGTACGGTTGCACACTGGAGAACGACCatattcttgtaatttttgtcAGAGTTTTCTAACAAACGGTGAATATAAACAACACAAGAACGATATACACGACAGAGCTAATCTTTGTAATGTTTGTGGTCGATCGTTTTGTAGTAAAGAAAGTTTGATGAGTCACATGAAACGGCATGatgaaaattacacaaaaatacacaatttcCAATGTGACTTTTGCAGTAAGCGATTTAGACAAGATATGCACTTGAAAAAACATATAAGACGCATGCATAATGAGAATCGACGCAAATATATTTGTGATCTATGCAATAAAGAATTGGCTAGTCAGTATGGCTTAACAGTTCATAGAAAGGTACATCAAGGTCTTAAAATGAATGAATGTAAAGTGTGTGGAAAGAAATTTGTACGATTAAGTACACTAAAAGAACATATACGGGTACATTCCGGTGAGAAGCCGTACAGTTGCGATGTCTGTGGCCGATCATTTTCACAACGAACACCGTTAAGAATACATTTGAGAATGCACACTGGCGAAAAACCGTCGATAAAAATCGAAGATAAAAAGATAAGGAAATGTCCACATTGTCCGAAAATCTGTAAAACTTTCTACGCCTTAAAATCACACTTACCCGTACATACGGAACTTCGGCCATATTCATGTGAAAAATgcaagaaaaatttcaaatataagCAATCATTACATTTCCATCCATGTATCGATAAACATCCAGCAAAGTACAAATGCAACATTTGTGGCAAGAAACTTATCAGTGCAAAATCGTTGAAGATACATAATCAAcgacatttaaaacaatataaaactaCATGTGATGTTTGTGGACATGGTTGTATGTCTAATAGTGAGCTTCGAAAGCATGTTGATGAAAGACATAAAAGAAGTACAACCGCTCTGTGTACAATTTGCGGTCAGATACttcataataaaaaatatttggacGAGCACATGAGGAGACACGAAGAAAATTATAACCAAAAACGCAACATTCAATGTAAATTATGTACGAAAACCTTTCTGCAACAAGTACATTTAAATCGACACGTTAGAAGGATGCATAATGAGAATCGTCGCAAGCATATTTGTGATGTTTGCAATAAAGAATTAGCTAGTGGTTACGGTTTAACTGTACATAAACGTATCCATGAAGGTGTAAAATCCCACGAGTGTAGCATTTGTGGGAAGAAATTCACGATGAAAGAGGGATTGAAAGAACATTTTCGGACGCATACTGGGGAGAAACCTTACGTTTGTAAGATTTGCAACAGagaattttcacagggaaaaACACTGAGAAATCATCAGAAAAAGCATACAACAGATAAGTCTTAA
Protein Sequence: MATDNKGYKCFYCENVYQIKWYWQQHMIKKHEEHRPHSCLICHERFKFQKEYKIHRQIHKQCPICQKQLKHFFSLSCHIRKHSDDAKFTCDICGKSYVFENNLKWHKIHAHETVHVCEICGKSIKSKGAFDCHMITHEKDYNEKLDFKCEICSRVFRQKRHLDRHIRHNHKDRQTYVCDLCGKTLSTKRGLEDHKNVHKGIKLNECKFCGRKFTRHNTLVDHLRTHTGEQPFKCNHCDKAFSQRTALQIHVRLHTGERPYSCDICQNKIETNDGYKCPYCDNIYQIKWYWQQHMVRKHEEHRPHSCIICQERFKRREEYKLHRQSHKQCSICQKEFSSFFRLSCHIRQHFKDYRFFCDICEKGFVVQSRLKQHQRNVHGARLVCDICGTSIKSKNIFENHMRTHEKDYNEKRDFKCEFCSRAFRQKRHLDRHIKGSHNENRRKHICDLCGKVLSNERSLTEHKNAHKGIKTVECKYCGRKFNRKNTLVDHLRTHTGEQPFKCTYCGKAFSQRSALQIHVRLHTGERPYSCNFCQSFLTNGEYKQHKNDIHDRANLCNVCGRSFCSKESLMSHMKRHDENYTKIHNFQCDFCSKRFRQDMHLKKHIRRMHNENRRKYICDLCNKELASQYGLTVHRKVHQGLKMNECKVCGKKFVRLSTLKEHIRVHSGEKPYSCDVCGRSFSQRTPLRIHLRMHTGEKPSIKIEDKKIRKCPHCPKICKTFYALKSHLPVHTELRPYSCEKCKKNFKYKQSLHFHPCIDKHPAKYKCNICGKKLISAKSLKIHNQRHLKQYKTTCDVCGHGCMSNSELRKHVDERHKRSTTALCTICGQILHNKKYLDEHMRRHEENYNQKRNIQCKLCTKTFLQQVHLNRHVRRMHNENRRKHICDVCNKELASGYGLTVHKRIHEGVKSHECSICGKKFTMKEGLKEHFRTHTGEKPYVCKICNREFSQGKTLRNHQKKHTTDKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -