Basic Information

Insect: Mylabris variabilis
Gene Symbol: -
Assembly: GCA_037464815.1
Location: JAZBGW010000848.1:6952-11038[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 3.6e-06 0.00021 21.5 7.0 1 23 14 37 14 37 0.98

2 30 0.0018 0.1 13.0 0.3 1 23 44 66 44 66 0.97

3 30 7.2e-06 0.00043 20.5 0.9 2 23 73 94 73 94 0.97

4 30 3.4e-06 0.0002 21.5 0.6 1 23 100 122 100 122 0.98

5 30 0.0035 0.21 12.1 0.1 4 23 127 146 127 146 0.96

6 30 0.00075 0.045 14.2 0.8 1 23 152 175 152 175 0.93

7 30 0.00021 0.013 15.9 1.3 3 23 184 203 182 203 0.97

8 30 0.00087 0.052 14.0 1.4 1 23 213 236 213 236 0.96

9 30 1.6e-05 0.00095 19.4 0.7 1 23 243 265 243 265 0.98

10 30 1.6e-06 9.7e-05 22.6 0.8 2 23 272 293 271 293 0.97

11 30 7.5e-06 0.00045 20.5 1.3 1 23 299 321 299 321 0.98

12 30 0.0021 0.13 12.7 0.2 1 19 327 345 327 345 0.98

13 30 0.034 2.1 9.0 1.3 3 23 346 366 346 366 0.97

14 30 0.00026 0.016 15.6 2.6 1 21 372 392 372 393 0.93

15 30 0.0046 0.27 11.7 5.6 1 23 400 422 400 422 0.97

16 30 0.0053 0.32 11.5 3.8 1 23 428 451 428 451 0.95

17 30 0.00052 0.031 14.7 4.3 3 23 460 480 459 480 0.99

18 30 0.00036 0.021 15.2 1.1 1 23 490 513 490 513 0.97

19 30 0.0043 0.25 11.8 0.3 1 23 520 542 520 542 0.97

20 30 4.5e-06 0.00027 21.2 1.6 2 23 549 570 548 570 0.98

21 30 3.3e-06 0.0002 21.6 2.0 1 23 576 598 576 598 0.98

22 30 0.00023 0.014 15.8 0.8 2 23 619 640 618 640 0.94

23 30 8.7e-06 0.00052 20.3 1.8 1 23 646 669 646 669 0.97

24 30 0.0071 0.42 11.1 5.7 1 23 673 695 673 695 0.91

25 30 0.00044 0.026 14.9 0.9 1 23 701 724 701 724 0.97

26 30 0.06 3.6 8.2 1.4 3 23 733 752 732 752 0.98

27 30 0.00014 0.0084 16.5 3.4 1 23 762 785 762 785 0.98

28 30 3.1e-05 0.0018 18.5 0.8 1 23 792 814 792 814 0.98

29 30 9e-07 5.4e-05 23.4 1.9 1 23 820 842 820 842 0.99

30 30 4.1e-05 0.0025 18.2 0.4 1 23 848 870 848 870 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	3.6e-06	0.00021	21.5	7.0	1	23	14	37	14	37	0.98
2	30	0.0018	0.1	13.0	0.3	1	23	44	66	44	66	0.97
3	30	7.2e-06	0.00043	20.5	0.9	2	23	73	94	73	94	0.97
4	30	3.4e-06	0.0002	21.5	0.6	1	23	100	122	100	122	0.98
5	30	0.0035	0.21	12.1	0.1	4	23	127	146	127	146	0.96
6	30	0.00075	0.045	14.2	0.8	1	23	152	175	152	175	0.93
7	30	0.00021	0.013	15.9	1.3	3	23	184	203	182	203	0.97
8	30	0.00087	0.052	14.0	1.4	1	23	213	236	213	236	0.96
9	30	1.6e-05	0.00095	19.4	0.7	1	23	243	265	243	265	0.98
10	30	1.6e-06	9.7e-05	22.6	0.8	2	23	272	293	271	293	0.97
11	30	7.5e-06	0.00045	20.5	1.3	1	23	299	321	299	321	0.98
12	30	0.0021	0.13	12.7	0.2	1	19	327	345	327	345	0.98
13	30	0.034	2.1	9.0	1.3	3	23	346	366	346	366	0.97
14	30	0.00026	0.016	15.6	2.6	1	21	372	392	372	393	0.93
15	30	0.0046	0.27	11.7	5.6	1	23	400	422	400	422	0.97
16	30	0.0053	0.32	11.5	3.8	1	23	428	451	428	451	0.95
17	30	0.00052	0.031	14.7	4.3	3	23	460	480	459	480	0.99
18	30	0.00036	0.021	15.2	1.1	1	23	490	513	490	513	0.97
19	30	0.0043	0.25	11.8	0.3	1	23	520	542	520	542	0.97
20	30	4.5e-06	0.00027	21.2	1.6	2	23	549	570	548	570	0.98
21	30	3.3e-06	0.0002	21.6	2.0	1	23	576	598	576	598	0.98
22	30	0.00023	0.014	15.8	0.8	2	23	619	640	618	640	0.94
23	30	8.7e-06	0.00052	20.3	1.8	1	23	646	669	646	669	0.97
24	30	0.0071	0.42	11.1	5.7	1	23	673	695	673	695	0.91
25	30	0.00044	0.026	14.9	0.9	1	23	701	724	701	724	0.97
26	30	0.06	3.6	8.2	1.4	3	23	733	752	732	752	0.98
27	30	0.00014	0.0084	16.5	3.4	1	23	762	785	762	785	0.98
28	30	3.1e-05	0.0018	18.5	0.8	1	23	792	814	792	814	0.98
29	30	9e-07	5.4e-05	23.4	1.9	1	23	820	842	820	842	0.99
30	30	4.1e-05	0.0025	18.2	0.4	1	23	848	870	848	870	0.98

Sequence Information

Coding Sequence: atGAAAAGACACGAAGAAGGCTATAATGAAAAACGTAATTTCGAATGCCAACACTGTGATAAAACTTTCTCACAAATGTTCCATTTGAAGAAGCATATTAGAAGAATGCACGACGATAATCGCCCCAAACATATATGTGATGTTTGCAATAAAGAATTAGCTAGTGCTTATGGTTTAACTCTACATAAACGTATACATGATGGTATCAAGCCTAATGAGTGTAAATTTTGTGGTAAAAAATTCACGGGCAAAACCTTATTAACGGAACATATTAGAATACATTCCGGTGAGAAGCCGTATGTTTGCGATATTTGCAATAGAGCCTTTTCACAAAGAACACCATTGAAGAATCATTTGAGGCAACACACGGGAGAGAAACCCATCTGTGGTAAAAAGCTGAGTAGTTACAGTATGTTAAAGATTCATCGTTTACgccatttaaaacaatataaatatacatGTGAAATATGCGGTTACGGTTGTATGTTTAATAGTGAACTTAAGTCACATATAACGGATGTACATGTTACTGATCACAAATATAGTATCTGTGATATTTGTGGCCAATCATTCAGGAGTAGACGTTTAAAAAGTCATATGAAACGGCATGAAGCCGGTTATAAGGAGAGACCAAATTTCAAGTGTAAATTCTGTACGAAAACCTTCTCAGAAATAGGTTATTTAAAAGGGCACATTGATAGAATGCATAATAATGATCGTCGTAAATATGTTTGTAGCAtttgtaataaacaatttgCTAGTACTTCCAGTTTAAGTGTACATAAACGGCTTCATACTGGTGTACGAACTGTTGAATGCAGTgtatgcaataaaaaattcaccCGAAAAGATGCTTTATTGGAACATACTCGTACACATACTGGTGAGAAGCCTTACATTTGTCATGTTTGTGGCAGAGCATTTTCACAAAGAACACCGTTAAACAATCACCTCAAACAACATACAGGAGAAAAACCGTATTCTTGCGATATTTGCGACAGCAAGTTTGTTACTAAAAGCACATTGGCAGTTCATTGTTCGTTTTGTATGAAAATCTATAAAGATAAACGTGCATTAAGGAAACATTTATATATTCACAAAGAGATGCAGCCATTTTCCTGCGATATATGCAAGAAAACATTCCGAAGAGAAAGCAAATTGAGTGATCATAAGTGTATCAATGATGCTAATATGAAGCATGAGTGTGAAATTTGCAATAAGAAACTCTGTAGTTTGTATACTTTGAAACAGCACCGTTTACGCCATttgaaacaattcaaatttacttGTGAACTTTGTGGACAAGGCTGCATGTCGAATAGTGAATTTCGGCAACATATGGAACATAAACATATTAACGAaggaaaatcgaatttgtgtaatatttgtggTAAATTCTGTTGTAATAAAGCATCATTAGAATATCATGTGAAAACCCACGATGAAAATTACACAGAGAAACGTCTTTTtgaatgtaaattttgttcaaaGAGTTTTCCACAGGTACTGCTTCTAAGAAGTCATGTTAGAAGAATGCATAATGATAATCGACAAAAGCATATTTGCAACATTTGCAACAAGGAATTAGCTAGTGGTTACGGTTTAACTGTACATAAACGTATTCATGAAGGTATAAAACCAAATAAATGCACCTTTTGCGGTAAAACATTTACACGAAAAGACATTTTAATTCAACATATTCGAACACATTCAGAAGAGAAACCTTATGTTTGTCACATTTGTAATAGAGCATTCACGCAAAGTACACCGCTAAAGAATCATTTACGGCAACATACAGGACAAAAACCATACTCTTGTAatAAGCAACCAAAGTCAACGACTACGGAACGAATACCATGTGCTTATTGTTCGAAAACTTTTAGTACAAATCATCGTTTACAAGAACACTTAGGTGTTCATCCTGATGTTGAACCGTATTCATGCGACGTATGTAAGAAAACTTTCAAACGTTCAAAGTTGCTGTCTGAACATAAACGTATTGATCACCCTAAAAAacatatttgtaatatttgcgGTAAACATATAACCACAgccaaaaatttaaaaaaacattgtttACGCCACTTAAAACAGTACAAATTCGTCTGTGATATATGCGGTCAAGGTTGTATGACATCTCAGGAATTTCGTCTGCATATGAACAGAGTCCATCTTAAAATAGATACAGTCAGACTTTGTACGATCTGTGGTCAGACGATTCACAGTGCATACATTACCCGGCATATGAAGCGACATGAAGAAGGTTACGAGATAAATCGTGATTTCAAATGtcaattttgtacaaaaagTTTTTCACAAATGTTATATCTACAGAATCATATTAAGAGAATGCACAATGATAGTCGTCCGAAATTTACTTGTGACATTTGTAATAAAGAATTTGCTAGCAATTATGGTTTAAGTCTTCACAAACGCCAGCATGATAATGTGAAACCGTATGAGTGTAAATTTTGtgataagaaatttacagttaaaacacaattaaaaGAGCATATTAGAGTGCACACTGGCGAAAGACCTTATGTATGTAATGTTTGCAATATGGGATTTACACAAAGAACACCGTTAAGGGTTCATTTGAGGCAACACACTAAACAGAAACCGTAA
Protein Sequence: MKRHEEGYNEKRNFECQHCDKTFSQMFHLKKHIRRMHDDNRPKHICDVCNKELASAYGLTLHKRIHDGIKPNECKFCGKKFTGKTLLTEHIRIHSGEKPYVCDICNRAFSQRTPLKNHLRQHTGEKPICGKKLSSYSMLKIHRLRHLKQYKYTCEICGYGCMFNSELKSHITDVHVTDHKYSICDICGQSFRSRRLKSHMKRHEAGYKERPNFKCKFCTKTFSEIGYLKGHIDRMHNNDRRKYVCSICNKQFASTSSLSVHKRLHTGVRTVECSVCNKKFTRKDALLEHTRTHTGEKPYICHVCGRAFSQRTPLNNHLKQHTGEKPYSCDICDSKFVTKSTLAVHCSFCMKIYKDKRALRKHLYIHKEMQPFSCDICKKTFRRESKLSDHKCINDANMKHECEICNKKLCSLYTLKQHRLRHLKQFKFTCELCGQGCMSNSEFRQHMEHKHINEGKSNLCNICGKFCCNKASLEYHVKTHDENYTEKRLFECKFCSKSFPQVLLLRSHVRRMHNDNRQKHICNICNKELASGYGLTVHKRIHEGIKPNKCTFCGKTFTRKDILIQHIRTHSEEKPYVCHICNRAFTQSTPLKNHLRQHTGQKPYSCNKQPKSTTTERIPCAYCSKTFSTNHRLQEHLGVHPDVEPYSCDVCKKTFKRSKLLSEHKRIDHPKKHICNICGKHITTAKNLKKHCLRHLKQYKFVCDICGQGCMTSQEFRLHMNRVHLKIDTVRLCTICGQTIHSAYITRHMKRHEEGYEINRDFKCQFCTKSFSQMLYLQNHIKRMHNDSRPKFTCDICNKEFASNYGLSLHKRQHDNVKPYECKFCDKKFTVKTQLKEHIRVHTGERPYVCNVCNMGFTQRTPLRVHLRQHTKQKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -