Mmin024306.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- -
- Assembly
- GCA_034621355.1
- Location
- JAXAVZ010000080.1:1663482-1693338[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.004 0.28 12.4 4.0 1 23 394 416 394 416 0.98 2 18 0.15 10 7.5 0.9 1 23 423 446 423 446 0.90 3 18 1.2 83 4.6 0.4 1 15 450 464 450 464 0.91 4 18 1.4 1e+02 4.4 0.7 1 15 493 507 493 508 0.91 5 18 0.45 31 6.0 0.3 1 17 536 552 536 553 0.91 6 18 1.2 83 4.6 0.4 1 15 615 629 615 629 0.91 7 18 1.2 83 4.6 0.4 1 15 658 672 658 672 0.91 8 18 1.2 83 4.6 0.4 1 15 701 715 701 715 0.91 9 18 1.2 83 4.6 0.4 1 15 744 758 744 758 0.91 10 18 0.011 0.76 11.1 0.3 1 23 787 809 787 809 0.98 11 18 9.8e-05 0.0068 17.5 1.7 1 23 814 837 814 837 0.98 12 18 0.0041 0.28 12.4 0.7 1 23 841 864 841 864 0.96 13 18 0.082 5.6 8.3 0.6 2 22 876 896 876 900 0.92 14 18 1.9 1.3e+02 4.0 0.6 3 23 943 964 942 964 0.95 15 18 0.12 8.3 7.8 1.2 2 20 978 996 977 999 0.91 16 18 1.5e-05 0.001 20.1 0.3 1 23 1005 1027 1005 1027 0.96 17 18 1.9e-05 0.0013 19.8 1.3 1 23 1034 1056 1034 1056 0.96 18 18 0.0088 0.61 11.4 0.5 1 20 1061 1080 1061 1084 0.79
Sequence Information
- Coding Sequence
- ATGTGGTGCAGTGTACGCAATTGTGAGAACTCAAGAGATAACGTTTTCTCAAAATCGAACCCTCAAACACTGGACATTACTTATCATGGGTTTCCGATCGCACAATGGCTCAAGTACTCGTGGCTGGTGTCCCTCGGCATGGAAGAGAGTGAGCTGCCGGATACACCAATGATATGCTCTCAACACTTCAATCATGATGATTTTCTGATTGGCACCAGGATACTAAAGAGTGATGCAGTACCTACTGTTGTTCAGATCTGCATGATATGTCTAGACACAGGCAGCAAGCTGTATCCATtgactaaatataatttatcggAAGCCTACTACAATGTGACTGGATTATCTcTATGCAGCATGTTGAAACTATCACCCAAGCTGTGTTCTGAATGCGCGCACAGATTagtgaattgtaataaatttaggGACAAGAGTCTGCGGGCCCATAACCTGTTGTTGCAATTGATTGACACACACAATGTGctaACAGTACAAAACGTAAAAACAATCAACAGAGAAGAACACAGACTAACATCCgccattaaaaagaaaaccttCAAACCGGACCACTGCGATTTTGATTATACATATACAGAAGCAAAAGCCCTCCATCCtttacaaatagaaaaaatcGACATATCCATAGACACGGAAGTGAAAATAGAGAATGAAAACGAGAATGAGTTAAAAGAGGAAAAATCAGATTATTCAGATAGCGACGACGATGTCATCGACAATGTAGATGTCATAGATAATGTAGACTGTTTCAAAGATCAAGATAATAAAGAAGTAGAAGTGATAAAAATAGACAGAGACAATATAGAGGATTTCATAAACAACGATGTTTTCACCGATGTTGAATTTCCTAACGTAGACAACGGTTGTGAAGTTGATATAGATTTTATGGATGAGGatgataatatgaaattgtCTAGTATTATTAATAGTAAACGTAAGATtagtaaaattagtaaaaagaaACTTAGTAAGGATGTTAAGGTTAATGGTGGGAAGACAGATAGGAAAAATCGTGTTAAGTCTGAAGGAAGAGGTCGTCCAGGTAGAAAGCCAGGTTTCAAAGAGGAGCTGAAACTGTTCAAAGTGACGGAGCTGACCCACGAGGAGCAGCTAGCGGAAATACAGAAGCGACAAGAGACGTCCAACTACAAGAACTCTCCGTTCAAATGTACCACGTGCTACAAGGGTTTCTGTGATATTAACGCGTACAACAGACATATGGACAAACATACTAATAAATTCGGACACTTCGCGTGTCCCATATGTGGTCTCCACACTAAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACGTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGGCACAATTGGAACACGTGCCATATGCGCGTCTCTGAGAACACGTACAGAGTGAAAAAAATACCCACGCTGCGAGAACCTGCACGATACTGTTTCGTCACAGGACGTAGCTCACAATGCGGAACACGTGCCATATGTGGTCTCCACACTAAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGCTCACAATGTGGAACACGTGCCATATGTGGTCTCCACACTGAGAACACGTACAGAGTGAACAAACACTTGGGCAATACCCACGCTGCGAGATACACCTGCACTATATGTCCCTTCGTCACCAGGAGTAGaaattccGCAAAAGCCCACGAAAGATGGCACGCTGGAAAGAAGTACAAATGTCCACATTGTGACGAGGAATTTGTTAAGAGCACGTCATACATGTCCCACGTGCGTATAAAGCACCCTTCAGACCACGTGTGCACTCTGTGCGGTTTTTCCTTCATCGGCGAGCGCGGTTTGCGTATGCACCTCAATATGAAACACCGTTTTGACGACACGCAGAATCCCTTGGGTCCGTCGTGCGACGAGTGCAACATACGTTTCGCTTCCGACACGGCCTACCACCAACATATGAAGGTGTCTCCCAAACACGCCACCGCCGATACATTCAAGTTGAACTACCCAGTGAGGAAGGTCTGTCGTCGTAACCAGCCCCGTCCTGCCAAGCCTGTCAAGCGCGATCCAGTTTCAACCCCCAAGACTCTAGGACCAGTCGACTGCGAGCAGTGCGGCATTAAACTGAAGGGCTCCAGGAGCTACGCGATGCATTTCAAGAAGTACCATCCGGACAAGAACCGCACCAAGTTCCCCAAAGCGAGGATAATGTGCGAGCTGTGTGGAAAGATATTCACGTGCATGGCCCACCTCCGCTACCACATGCCGATCCATGCTGAGCAGAAGCAGTTCAAATGCGACGTGTGCGACAAGAGGTTCGCCTTCAAAGCCAACCTGATGAACCACGTGGTGATACACGACGAGTCTCGCCCGCGTTTTGAGTGTTCTGTCTGCGGGAAGAACTTCTCCAACCAGCAGAACAGGTGGCGGCATATGTTTTTGCACAAAGGCATTAAATTCAAATGCGAGATTTGCGACAAGAGCTTCAACACCGACCCGCAGAGGGCGCTGCACGTCGCCCACGTGCACATGAAGGTGCCGTGGCCGAAGCGACACCGCGGGCCACGACCCAAGCCGCACAGACGACACGCGATGTACACAAGCGACTCGCAAGACTCGGCTATATATGTCCTGACTGACTATCTGAAGAGAGAGTTACGCAACCTTTCCCAGAAGGAAGATATCCGCGCTCTGATAACAGCAAAGAAATCGGGCATTGCCGCTTCGGCGAACATACTCGATGCGCTGCAGTATCGAGGTAACTTCATAAGGATGCGGTAG
- Protein Sequence
- MWCSVRNCENSRDNVFSKSNPQTLDITYHGFPIAQWLKYSWLVSLGMEESELPDTPMICSQHFNHDDFLIGTRILKSDAVPTVVQICMICLDTGSKLYPLTKYNLSEAYYNVTGLSLCSMLKLSPKLCSECAHRLVNCNKFRDKSLRAHNLLLQLIDTHNVLTVQNVKTINREEHRLTSAIKKKTFKPDHCDFDYTYTEAKALHPLQIEKIDISIDTEVKIENENENELKEEKSDYSDSDDDVIDNVDVIDNVDCFKDQDNKEVEVIKIDRDNIEDFINNDVFTDVEFPNVDNGCEVDIDFMDEDDNMKLSSIINSKRKISKISKKKLSKDVKVNGGKTDRKNRVKSEGRGRPGRKPGFKEELKLFKVTELTHEEQLAEIQKRQETSNYKNSPFKCTTCYKGFCDINAYNRHMDKHTNKFGHFACPICGLHTKNTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHVGNTHAARYTCTICPFVTRSRHNWNTCHMRVSENTYRVKKIPTLREPARYCFVTGRSSQCGTRAICGLHTKNTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHLGNTHAARYTCTICPFVTRSSSQCGTRAICGLHTENTYRVNKHLGNTHAARYTCTICPFVTRSRNSAKAHERWHAGKKYKCPHCDEEFVKSTSYMSHVRIKHPSDHVCTLCGFSFIGERGLRMHLNMKHRFDDTQNPLGPSCDECNIRFASDTAYHQHMKVSPKHATADTFKLNYPVRKVCRRNQPRPAKPVKRDPVSTPKTLGPVDCEQCGIKLKGSRSYAMHFKKYHPDKNRTKFPKARIMCELCGKIFTCMAHLRYHMPIHAEQKQFKCDVCDKRFAFKANLMNHVVIHDESRPRFECSVCGKNFSNQQNRWRHMFLHKGIKFKCEICDKSFNTDPQRALHVAHVHMKVPWPKRHRGPRPKPHRRHAMYTSDSQDSAIYVLTDYLKRELRNLSQKEDIRALITAKKSGIAASANILDALQYRGNFIRMR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -