Mmin001032.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mycalesis mineus
Gene Symbol
-
Assembly
GCA_034621355.1
Location
CM067881.1:18503342-18521817[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.064 4.4 8.7 0.7 2 21 414 433 413 437 0.90
2 17 3.7 2.5e+02 3.1 0.4 1 20 439 458 439 461 0.74
3 17 0.13 9.1 7.7 0.9 1 19 650 668 650 671 0.93
4 17 0.13 9.1 7.7 0.9 1 19 701 719 701 722 0.93
5 17 0.13 9.1 7.7 0.9 1 19 748 766 748 769 0.93
6 17 0.13 9.1 7.7 0.9 1 19 903 921 903 924 0.93
7 17 0.13 9.1 7.7 0.9 1 19 1058 1076 1058 1079 0.93
8 17 0.13 9.1 7.7 0.9 1 19 1282 1300 1282 1303 0.93
9 17 0.047 3.3 9.1 1.3 1 23 1329 1352 1329 1352 0.94
10 17 0.0061 0.42 11.9 1.0 2 23 1358 1379 1357 1379 0.97
11 17 4.4 3.1e+02 2.9 0.7 2 23 1404 1424 1403 1424 0.95
12 17 0.003 0.2 12.9 1.2 2 23 1514 1535 1513 1535 0.97
13 17 4.9e-07 3.4e-05 24.8 2.9 1 23 1541 1563 1541 1563 0.99
14 17 8.7e-05 0.006 17.7 0.6 2 23 1569 1590 1568 1590 0.96
15 17 0.00012 0.0081 17.3 0.4 2 21 1597 1616 1596 1617 0.93
16 17 0.5 34 5.8 0.3 1 20 1622 1641 1622 1642 0.94
17 17 0.0084 0.58 11.4 1.3 3 23 1654 1675 1653 1675 0.97

Sequence Information

Coding Sequence
ATGGATGAAAACAACAAGAAAAGGAGTCGAAAAACGAAGTTAGTGCTGCGGGAATGTATGGATTCCGATGATGAAAATATCGCAGTTATGCAGGAAGAAATCGAGGCAGCTTTGGcgcaaatgaaaaataaatccatattaaaaaaattgagcaaACAATTTCCTGTAGTGAAACCAATGCAGTTCTCAGTCAAAGTCGAGGTGGAGGAGCTTGATGAGACATGCCCCAGGACGGAAAGTGAAACAGGATTGAACATAAAAATTGATTCAGTCAAAAGTCTTTCACAACCTACTCCTACACTCACATCTCCATTAGTCTCTGCAGTTACCGCACCCTGTTTACTCGGCGCGCCTCGTTTAGTTCCCGCACCTCCTGTAGTTCCCGCTACTCCTTTAGTTACCGCTCCTCCTTTATTACCCCCTCCTCCTTTAATTCCCGCTCCTAAAGAGCCCACTGTCGTTTCGTTCAGAATACCCGAAGATGTGATCAGAAGGGAATTTGAAAGACAAGCACGTGAAACGACCAGCCTAGCTGACAAATTGATAGAGGTAAACATTAGAAACTATCTAGGTAGAAAAAGAAAACTCACGGTAACAAACCCCATAGACTCTAGACTGCAAGCTATATTTCGTAAAACGTGGAAGAACTGGCGGAATACATTCCCGGAAATCCGTGAGACGCCGCTATTGTATAAATGTTACGCCTGCAGTATAGCGTGGTGGCATCTGCACGACTTCAGAGAGCATGTGATGGCTCACAAGAAGCCCCTAGTTATCGAGTTCAAAAACATTTGCCACGAATCCAGTTTGATAGCTCACGATGGAACAATGTACGCCAAAGAGAAGATATACCGGATAGGATCAAATTGCTGGAGGTGTGGGAAAGACCCCGCGCATCACATGTCATCGATTATGGATAAGAATGGATGTTACACACACAAATACAGGTGCAAGGGTTGTATGGAGAAATTTTATACATGCACTTTGCTGTTCGAGCACGAGTGCAATTGTCTGCTGTTCCAAAGGATTGTAAACGGAAACAAGTTGACAAAAAAAGTTTTCGAATGTAGCTTGTGTCCTGCTAAATTAAGTGAGGAGCATTTCGACGAGCATATGTTTCAACGGCACAGCGTGCGCTCCGACCTGCCGGAGGACTGGGTTCTCAAGACGTGCAGCCAGTGTAACTATCCCTTCCAAATGCACGCGCTGCACGATTGCTCAATGAAACCGTCACTGACGTCGTGCAAGTTCTGTTTGCAAACATTCCCCACTAACTCTTTCTTATTGATCCACATTAATGCAACGAAGCACCACTACCCTTGCAAGATCTGCGGCGCGGTGCTCAGGAAGCAGTGCATGGAAATGCAGCACCTCCTGGACCACACGGACAACTACGCTATTCTATACAAGTGCATCTTTTGCTCAGATATATATTTTCCTACATTGGGttcaattaataaacataaagtCGATGATCATCATAGAAAAGAAAGTAACACCTTAATGACATGTTATAATGTGGTAGCTGTACCAAAAACGTTGGTTATGAATCAACCAGGATACACAAATATTGAGAAGGAACCTGCATTGGAACCGCCTAAAGATCCTCCTGACGAAGTTGTTACTACACTGGAAGAAAATCTAGAAGAATTAATGGAGGATGATATGATAATATTAGACCCAAGCTATAATGGTTCAATGAACTATGAAATGGATACTAGAACGAACGCACCAGTGACGTCAGAAGAAGCAGACTTGCATTCACCTGAACCTCCTGAACTGGTTGTGTATCATTCACAGCGAAAAAGAATTTACAAGTGCAACAAATGTTCTTTCCGCGGCTACCACCAGGCGTACCGAGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTTACCACAGTGCTGTACTCCTGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTACGTGTACACACACTCCGTGATACCGCGAGCACCTGCAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGACGCAGGGTCACGCCGGCTCGCGGCGAGCCAAGGACTGCTTGCGCAAGTGCCGCTCGACGCTCACCACAGTGCTGTACTCCTGCACCAAATGCTCGACCGGGTTCCCTTCGTGGTACAAATACATCATGCACTTTACCAAGGTCCATAATTACAAACATCTAACATGCCCCAAATGCTTCCGACAATTCGTGAGCATGGGGCCACTCCAGCATCACATACAGTCGCACGTAAAGGAGAGCTTTGTAAACATATACGTGATAAGGAGCAAGGAAGACGAGAACCCTGAGCAGTTCCTACAGCAGTGCAAGATATGTTCGCAGAAAATTAGCCCCATGGAGTTCTTCAAACACTGGGAGACCCACCTACAGATTGTGGAGGTCACGAGAAGAGAGCAGCCGCCTAAGGGTTTCGCTGACGACATGGAGCATAAACAcgatttgaaaaaaatgttgtTACTAATGCAAGGACTACATACCCGATCGAGAACCCCAGAAGATAAATTGCAGAACAATCTGCACTACTGCTTCAAGTGCAAGCGTCGCTTCGAGCGCAAGAACGAGTGCAAGCGGCACTTCATCGAGCACCTGCTGGTGGACGCGAACCAGGAGCGGCACAGGCACGGGTGCCTCAAGTGTCAGATATGCTCCGCCGATTTTTACACCAATGAACGCTACAAGCGGCATATGCGGGAGCACGCCAGCCTGCCGCTGTACAAGTGCGAGCTGTGCGACAAAACGTTCAGCGACTCCAGCAACTTCACTAAACACAAGAAGGTGCACAACCTGTCCGTGCTCATCTGCGATATCTGCAAAAAGAAGTTCACCGGCAAGCCCTTCCTTGAGAAGCACATGATGATGCATCAGAAAATAAAGCCGCTCGTGTGCCAGGAGTGCAACAAAGTGTTCTACACGGAGTCGAGCTACAAAAAGCACATCAACAGAGGCAAGACGCGCTTCAAATGCGCAATCTGCCACATCTTCTTCGACACGCTGCGGGATAAGTGGGACCATATGTGGGAGATCCACCGAGAGAGGAAGTTTGAAGCGGACTGTCCGGTTTGCTTCATGGGCTTCCGCAAGCACCAGGACGTGCGCCGCCACCTGCGCACCGCCCACCAAGACGTGCCGCGCTTCAAGTACGTGCCCAACAAGACGCCCATCGCGCACGTGGACCGTGTCCTCGCGGAGGCAGACGAGCTCGTCGTGCAGGACGTGCGCCGCCACCTGCGCACCGCCCACCAAGACGTGCCGCGCTTCAAGTACGTGCCCAACAAGACGCCCATCGCGCACGTGGACCGTGTCCTCGCGGAGGCAGACGAGCTCGTCGTGGTCTGCGATATGGACTAG
Protein Sequence
MDENNKKRSRKTKLVLRECMDSDDENIAVMQEEIEAALAQMKNKSILKKLSKQFPVVKPMQFSVKVEVEELDETCPRTESETGLNIKIDSVKSLSQPTPTLTSPLVSAVTAPCLLGAPRLVPAPPVVPATPLVTAPPLLPPPPLIPAPKEPTVVSFRIPEDVIRREFERQARETTSLADKLIEVNIRNYLGRKRKLTVTNPIDSRLQAIFRKTWKNWRNTFPEIRETPLLYKCYACSIAWWHLHDFREHVMAHKKPLVIEFKNICHESSLIAHDGTMYAKEKIYRIGSNCWRCGKDPAHHMSSIMDKNGCYTHKYRCKGCMEKFYTCTLLFEHECNCLLFQRIVNGNKLTKKVFECSLCPAKLSEEHFDEHMFQRHSVRSDLPEDWVLKTCSQCNYPFQMHALHDCSMKPSLTSCKFCLQTFPTNSFLLIHINATKHHYPCKICGAVLRKQCMEMQHLLDHTDNYAILYKCIFCSDIYFPTLGSINKHKVDDHHRKESNTLMTCYNVVAVPKTLVMNQPGYTNIEKEPALEPPKDPPDEVVTTLEENLEELMEDDMIILDPSYNGSMNYEMDTRTNAPVTSEEADLHSPEPPELVVYHSQRKRIYKCNKCSFRGYHQAYREHLQTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKVRVHTLRDTASTCRRRVTPARGETLTTVLYSCTKCSTGFPSWYKYIMHFTKTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKVRVHTLRDTASTCRRRVTPARGEPRTACASAARRSPQCCTPAPNARPGSLRGTNTSCTLPRYVYTHSVIPRAPADAGSRRLAASQGLLAQVPLDAHHSAVLLHQMLDRTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKVRVHTLRDTASTCRRRVTPARGEPRTACASAARRSPQCCTPAPNARPGSLRGTNTSCTLPRYVYTHSVIPRAPADAGSRRLAASQGLLAQVPLDAHHSAVLLHQMLDRTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKVRVHTLRDTASTCRRRVTPARGEPRTACASAARRSPQCCTPAPNARPGSLRGTNTSCTLPRYVYTHSVIPRAPADAGSRRLAASQGLLAQVPLDAHHSAVLLHQMLDRVYHSAVLLGSLRGTNTSCTLPRYVYTHSVIPRAPADAGSRRLAASQGLLAQVPLDAHHSAVLLHQMLDRTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKTQGHAGSRRAKDCLRKCRSTLTTVLYSCTKCSTGFPSWYKYIMHFTKVHNYKHLTCPKCFRQFVSMGPLQHHIQSHVKESFVNIYVIRSKEDENPEQFLQQCKICSQKISPMEFFKHWETHLQIVEVTRREQPPKGFADDMEHKHDLKKMLLLMQGLHTRSRTPEDKLQNNLHYCFKCKRRFERKNECKRHFIEHLLVDANQERHRHGCLKCQICSADFYTNERYKRHMREHASLPLYKCELCDKTFSDSSNFTKHKKVHNLSVLICDICKKKFTGKPFLEKHMMMHQKIKPLVCQECNKVFYTESSYKKHINRGKTRFKCAICHIFFDTLRDKWDHMWEIHRERKFEADCPVCFMGFRKHQDVRRHLRTAHQDVPRFKYVPNKTPIAHVDRVLAEADELVVQDVRRHLRTAHQDVPRFKYVPNKTPIAHVDRVLAEADELVVVCDMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-