Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: CM067890.1:1202684-1208096[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.5 2.4e+02 3.2 1.6 3 23 50 71 48 71 0.90

2 14 7.4e-05 0.0051 17.9 4.7 2 23 109 131 108 132 0.97

3 14 2.6e-05 0.0018 19.4 1.2 1 23 133 155 133 155 0.98

4 14 0.22 15 7.0 0.0 1 23 188 210 188 210 0.92

5 14 0.68 47 5.4 0.6 3 23 241 262 239 262 0.89

6 14 0.22 15 7.0 1.4 1 23 269 291 269 291 0.92

7 14 3.6e-05 0.0025 18.9 0.7 1 20 297 316 297 318 0.95

8 14 0.003 0.21 12.8 0.7 1 23 330 353 330 353 0.95

9 14 3.4e-05 0.0023 19.0 0.2 2 23 359 382 358 382 0.96

10 14 3.5 2.4e+02 3.2 2.0 3 23 389 409 389 409 0.96

11 14 0.00084 0.058 14.6 0.5 1 20 414 433 414 436 0.95

12 14 0.00038 0.026 15.7 5.7 1 23 442 464 442 464 0.97

13 14 1.1e-05 0.00079 20.5 3.0 1 23 470 492 470 492 0.97

14 14 3.6e-05 0.0025 18.9 0.5 1 23 498 521 498 521 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.5	2.4e+02	3.2	1.6	3	23	50	71	48	71	0.90
2	14	7.4e-05	0.0051	17.9	4.7	2	23	109	131	108	132	0.97
3	14	2.6e-05	0.0018	19.4	1.2	1	23	133	155	133	155	0.98
4	14	0.22	15	7.0	0.0	1	23	188	210	188	210	0.92
5	14	0.68	47	5.4	0.6	3	23	241	262	239	262	0.89
6	14	0.22	15	7.0	1.4	1	23	269	291	269	291	0.92
7	14	3.6e-05	0.0025	18.9	0.7	1	20	297	316	297	318	0.95
8	14	0.003	0.21	12.8	0.7	1	23	330	353	330	353	0.95
9	14	3.4e-05	0.0023	19.0	0.2	2	23	359	382	358	382	0.96
10	14	3.5	2.4e+02	3.2	2.0	3	23	389	409	389	409	0.96
11	14	0.00084	0.058	14.6	0.5	1	20	414	433	414	436	0.95
12	14	0.00038	0.026	15.7	5.7	1	23	442	464	442	464	0.97
13	14	1.1e-05	0.00079	20.5	3.0	1	23	470	492	470	492	0.97
14	14	3.6e-05	0.0025	18.9	0.5	1	23	498	521	498	521	0.96

Sequence Information

Coding Sequence: ATGGCCAAGCACACCCCCATCCAGACAGACGTCACTAACCAACATCTCCAAAACTTGGATGAGCAGCGGGATCTAATAGACCTAGCAACATATGTATCAAACAGTTTACCAAAACAAACCACAGTTGATATAGTCGGTGGCATATTTTGCCATATATGTGCATCAACATATAATAACAAGAAGGAGTATGACGACCACTACTACAACCAACATGACAAGGGGGAGAAACTTCTGTACACTTGTGTGGTGTGTCACAAACAACTCACAACTTATCGCAGTTACCGCGGACATTGCTACTACATGCATGTCAGCAGGGGAAGGAACAAATGTGAACATTGTTCTAAAGTGTTTTCAAAGTTTTCTGCTCTGAGGGACCATATCAAAACTATGCACCACTTCGAATGTTCCACATGCAATAAGcaATACACAACCAAAACAGACCTGCAACTGCATCAAATCATTCATACAGATCCATCTAAAAACTATTGCCAAGTGTGTGAAactgaaatatttacaatagaCTCTTGCAAGGACCATATAGACCTCCACACCATCAACATATACACTTGCCCAATATGCAACGAGAATATACCCAGTAAAGACACTGCAGGAGAGCATCTTGccaaacattttgaaaatgcaGGAGATAAAAACACTGTAGATGCCGTACAAAAGTCTGATAATAAAGAAACATCTTTAGAAAGCTTGGGTGGTATAGCTTGCTGTTACTGCACTGTTGTGTTTGAGAACAGAGTGGAGTTTGATGCACACTTCTCGTATGACCACGGCGACAAGGACATAGTGTACTGCTGCGTTGTTTGCGGCGCAACATTCGAGAAGTATTCTGTGTTTCGGGAGCATGCCTATAACCATTACACAAAAGACAAATTTTGCTGCACGATATGCCAGAAAACATTCAACCGTCTGTCAATGCTGGCTACACACATGGCGGCCTGTCAGACCGACGCAGAGGCCAGCGGGAAACCGTTCGAGTGCCCGGAGTGTGGTCACCGCTATGGTACAGACCAGAGGCTGCGGCGGCACTTGCAGGACGTGCACGGCGTCCACTGCATCCGCTGTCCCGTGGCCGATTGCAAGAAAACATTTTCAACCCGAAAAGAGTTGATCCTGCACCAGTATGTGCACACATCTCATCAAAACTGGTGCAGACAGTGCGGATTGTTGTTCACGTCGCTGACCTCATGCGAGCGGCACTTGGACGTGCACAAGGGGACCATCTACAGCTGCCCCATATGTAACAAGAACTACAAGGAGAAATATGTCCTCATGAAGCATATACCGCAGCACTTTGAGAGCACTGTGCACATCTGCAAGCTGTGCGGCAAAGTATTCGACAACAAACGCCGCTTCAACCACCATTTGCAAACGCACAGCACCGAGCACAATCATAATTGCACATACTGTGGAAAAGGTTTCAACACCCTGTCTCGGCTGCAGCAGCACTTGAACACCCACACTGGCTCCAAGCCTTACAAATGTACTATATGTTCCAAAACGTTCGCCAGCTATCCCAACTGGGTCAAACATATGGGACGAATGCACAAGCTTGATAAAGTAAACAAGGagaatcccacttctgatagtGGGGCcgatgaaattaataattttgaaagtttCAACGATATTGAATTGACTAACAAAAACAACATGTCTGAATATAACGGAAATATGATAGAAATGACTCATAATATTATTCCTCAAACAGAGTCGGATACGAAACTTAGGTATGTGTTCTCAGATCAAAATAGTAAAATGGAAGCAGAGACAATAGACCAGATAGACATTGAAAAGGAGTTGCAGATCATTGAGAACAATGCGGAGAAGAAAATCATTGGCAGCTTTGAGTTCATTGACTCCTCTATACTTGATAATGCAAACTCAGAGGTTCCTGCCAACATTGGTCCCTCCGAAGCAGTCTACCCTGCAGAGTATGGCCCAGAGTTCACCATCGGAGACAGCTGCGGCATCCTGGACTTGGACGACCACATGCTGCCCCACATCGACCCACTCCTCACCATCAAGACCGAGGATTACATGACCCGAAACATTCTCCTCCCCCCGAACATGGAAGCTGCAATGTACCAACAGTATCAAGGTGCCCAGAAATGGGAGCCCCCAGTTTTTACCAAGGTATGCCCCGAATACCCCTACTATGGGGACATGGTTGATACCAATTGGCTCTCGATGATGAACGCCAATATattttga
Protein Sequence: MAKHTPIQTDVTNQHLQNLDEQRDLIDLATYVSNSLPKQTTVDIVGGIFCHICASTYNNKKEYDDHYYNQHDKGEKLLYTCVVCHKQLTTYRSYRGHCYYMHVSRGRNKCEHCSKVFSKFSALRDHIKTMHHFECSTCNKQYTTKTDLQLHQIIHTDPSKNYCQVCETEIFTIDSCKDHIDLHTINIYTCPICNENIPSKDTAGEHLAKHFENAGDKNTVDAVQKSDNKETSLESLGGIACCYCTVVFENRVEFDAHFSYDHGDKDIVYCCVVCGATFEKYSVFREHAYNHYTKDKFCCTICQKTFNRLSMLATHMAACQTDAEASGKPFECPECGHRYGTDQRLRRHLQDVHGVHCIRCPVADCKKTFSTRKELILHQYVHTSHQNWCRQCGLLFTSLTSCERHLDVHKGTIYSCPICNKNYKEKYVLMKHIPQHFESTVHICKLCGKVFDNKRRFNHHLQTHSTEHNHNCTYCGKGFNTLSRLQQHLNTHTGSKPYKCTICSKTFASYPNWVKHMGRMHKLDKVNKENPTSDSGADEINNFESFNDIELTNKNNMSEYNGNMIEMTHNIIPQTESDTKLRYVFSDQNSKMEAETIDQIDIEKELQIIENNAEKKIIGSFEFIDSSILDNANSEVPANIGPSEAVYPAEYGPEFTIGDSCGILDLDDHMLPHIDPLLTIKTEDYMTRNILLPPNMEAAMYQQYQGAQKWEPPVFTKVCPEYPYYGDMVDTNWLSMMNANIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -