Mmin026198.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mycalesis mineus
Gene Symbol
-
Assembly
GCA_034621355.1
Location
JAXAVZ010000307.1:288900-297882[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 1e-05 0.00069 20.6 0.5 2 21 107 126 106 127 0.94
2 12 1e-05 0.00069 20.6 0.5 2 21 143 162 142 163 0.94
3 12 1e-05 0.00069 20.6 0.5 2 21 179 198 178 199 0.94
4 12 1e-05 0.00069 20.6 0.5 2 21 215 234 214 235 0.94
5 12 1e-05 0.00069 20.6 0.5 2 21 251 270 250 271 0.94
6 12 1e-05 0.00069 20.6 0.5 2 21 287 306 286 307 0.94
7 12 4e-06 0.00028 21.9 1.2 2 23 323 344 322 344 0.96
8 12 0.11 7.3 8.0 0.5 1 23 350 372 350 372 0.91
9 12 0.0013 0.088 14.0 1.6 2 21 379 398 378 403 0.93
10 12 0.0078 0.54 11.5 0.4 1 23 411 434 411 434 0.90
11 12 0.21 15 7.0 0.3 4 23 443 465 440 465 0.89
12 12 0.12 8.1 7.8 0.0 1 13 474 486 474 488 0.89

Sequence Information

Coding Sequence
ATGCACTTGACAGATCTATCCGACCTAGCAGACATCCTAACCTCGAAACTAACGAAAGGTACTTACCATTTTCAACTTCTTAGACTCCTCACGCCAGACCCATCATTTGGCCACGCCGGCAGCAGCCACCAGCGCCTTCCCGAGCAGGAGAACTCGCACCAACCAAACGATTCGAAGAAAAAAAGAAGGAATATCTCGGCGGGCCCCTTATATATTGCAAACCCAGTCCCGACAATAGCGCGCCATTATCTTAAGCGACGTGCCCGCAGGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAAAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTGAGCCTGGGCCGGCTGCGCTACCATGTCAACAGTCACTCGGAGCAGCAGAAGTGCGAGCTGTGCGGCAAGATGTTCAGGAGCAAGGAGTCGCTGAGGACGCATCTGTTTATCCACAAGGGTGAGAAGGAGCACGCGTGTCCCAGCTGCGGCAAGAAGTTCCTGTTCAAGAAAGCGATGGAGATCCACGCCATCTCCCACCTGGACTCTGCGCAACTCTACTGTTACGAGTGCGATATGAACTTCAAAAACCAGATGTCCTTCAACCAGCACATGAAGTACAGCCTCAAGCACGTCGACCCCGCCAAGCTCAAACACGCGTGCACTCTCTGCGACAAGCGCTTCGTGAAGGCGGTGCGGCTGGAGGAGCACAAGCTGGCCGTGCACCTCAAGGTCACCCCCATCAGCTGCGCGGAGCCCGGCTGCCAGTTCGCGTGCTCGTCGAAGCCCGTGCTCCGCACGCACGTGCGCATGACTCACCGTAacgcgcgcgcgcgccgcgaCCACGTGTGCGACGTGTGCGGCAAGGCGTACGCGCGAAGCGTCTGGGGTGGTGGTAGCACGGCGGCCATGTTGAAAGGCACTTTTTTGAACGAGAGCGAACCGTGCACCACGCGTTAG
Protein Sequence
MHLTDLSDLADILTSKLTKGTYHFQLLRLLTPDPSFGHAGSSHQRLPEQENSHQPNDSKKKRRNISAGPLYIANPVPTIARHYLKRRARRSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLLSLGRLRYHVNSHSEQQKCELCGKMFRSKESLRTHLFIHKGEKEHACPSCGKKFLFKKAMEIHAISHLDSAQLYCYECDMNFKNQMSFNQHMKYSLKHVDPAKLKHACTLCDKRFVKAVRLEEHKLAVHLKVTPISCAEPGCQFACSSKPVLRTHVRMTHRNARARRDHVCDVCGKAYARSVWGGGSTAAMLKGTFLNESEPCTTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-