Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: CM067888.1:4654901-4664224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0002 0.014 16.5 4.8 1 23 235 257 235 257 0.98

2 11 0.00024 0.016 16.3 0.3 1 23 261 283 261 283 0.98

3 11 0.004 0.28 12.4 2.7 1 23 291 313 291 313 0.95

4 11 2.6e-07 1.8e-05 25.6 0.2 1 23 320 343 320 343 0.97

5 11 2.2e-06 0.00015 22.7 1.0 1 23 349 371 349 371 0.99

6 11 0.0027 0.19 13.0 3.0 1 23 377 400 377 401 0.96

7 11 0.0015 0.11 13.8 1.7 1 23 413 435 413 435 0.98

8 11 0.0016 0.11 13.7 5.0 1 23 441 463 441 463 0.95

9 11 3.5e-06 0.00024 22.1 0.6 3 23 471 492 470 492 0.95

10 11 0.0012 0.081 14.1 0.3 3 23 528 549 527 549 0.96

11 11 0.00067 0.046 14.9 3.1 1 23 554 577 554 577 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0002	0.014	16.5	4.8	1	23	235	257	235	257	0.98
2	11	0.00024	0.016	16.3	0.3	1	23	261	283	261	283	0.98
3	11	0.004	0.28	12.4	2.7	1	23	291	313	291	313	0.95
4	11	2.6e-07	1.8e-05	25.6	0.2	1	23	320	343	320	343	0.97
5	11	2.2e-06	0.00015	22.7	1.0	1	23	349	371	349	371	0.99
6	11	0.0027	0.19	13.0	3.0	1	23	377	400	377	401	0.96
7	11	0.0015	0.11	13.8	1.7	1	23	413	435	413	435	0.98
8	11	0.0016	0.11	13.7	5.0	1	23	441	463	441	463	0.95
9	11	3.5e-06	0.00024	22.1	0.6	3	23	471	492	470	492	0.95
10	11	0.0012	0.081	14.1	0.3	3	23	528	549	527	549	0.96
11	11	0.00067	0.046	14.9	3.1	1	23	554	577	554	577	0.97

Sequence Information

Coding Sequence: ATGgcattagatgttgataatatagAAAAACCTCAGGAGGAACAAAACTACAAAACTGAAGAGAAAACACTTAAAATTGAGTACCAGGAAAATAACTGTTCAGAAAATGGTGTCTATGATGAAGAAAATGTGgcattagatgttgataatttaGAAAAACCTCATGAGGAAGAAAGCTACAAAACTGAAGAGAAAACACTTAAAATTGAGTTCCAGGAAAATTTACTACTGGAAGTTAAACCAGAGACGCATGTAAAGATTGAAGAAGATTCCAGTGACGATGATTATAAGCAGGTAAACACGGCAGCAGATgttgaaaatatagaaaatgtTGAAGATGTTGCTGATGAGGAAAAGTACAAAACTGAAGAGAGAACACCTAAAATTGAGTACCAGGAAAATTCACgacaaagaaaattaaataaactaaaaagtaaaattcaaCGCAACAAATCGTTAAAAAGTattcaaagtttaaaaaagaaaaaatcaccTTCATCCGAAACCAGAGTACAAAGCAAGAATGTTGAAATTCAGCAATTAGACTCTGGAGatCCTGAAAGTACGCAAACGAAACAgtttaaaagcacttttaaGACGGTAGACACGGCAGATGGCCCTGTTTACTATTGCTTAACATGTATGGACAGTTTCAAATGTCGCCAAACTCTGAAGGTACATATGACTGAACAACACGCTACATTCCATTGCAACATATGTCAAAGGAATTTCAAAAAGGAGGAGAAACTGAAAATTCACACCCGCACACACTACGCTCGATATGAGTGCAACATTTGCGGCATTAAATTGAAACGATATCCAACACTTTTAAAACACATAACATCTCACACACAAGCAAAAGAAAAAATCTACACGTGTGATCTGTGTAAGAAAGACTTTAAGTACCGATCTACAATCATAAAGCATTTTGAGTACCACAAGGGTATACATAGGAAATTTGTTTGTGAGGTATGCGGAAAGTCCTTCAACGACCGAACCAATCTAAACATCCATGTCCGTAATGTCCACGATAAGTTGAAGCTGTTTAAATGTGACCAGTGCCCCAAAATATATGCAACGAATAAAACCTTGAAAATACATTTAAGAACCCATACTGGGGAGCGGCCGTACAAATGCGACTTTTGTGATAAAACATATACGTCCTCAACTGCTGTTGGCCAACATAAAAAAAGAGTTCATCACAACGATCCTTCTATATTGAATGGGATTAAAAGTTACAAGTGTAAAATATGTGGAGAAAGATGTTATGGGAGGGGCAAATTTGCTGCCCATACCAGAGAACATATCGGCAGGAAACCCTACCTGTGCCATATATGTAATAAGGATTTCACATGTAAATATTCTCTGAACCGACACATACAAGCCCATGAAGGTGTAGGAAAAGTTGCGTGCGAACTATGCGACAaggtttttacacaaaaaagCCTGATGAAACGTCATATGAGCAACATACACGACCCAAATAAAGCTTTTAGGCAAAAGACAAAGTGTGACTTGTGCAAAATGGCCGTGGTCAATATGGAAAAACATATGAAGAGTCATATGGGTAGATCGCTTCTATGTAGCTATTGCCCGAAAACATATTCAGAAGGAAATGCATTAAATCGGCACATCAAAGAAAGACACAGCGGCATATCCTTTAGTTGTAACTTGTGccctaaaaaatatatgaaacagAGAAGTCTGCATAGACACATATTAAAAGTACACAACATACAGCTTAAAAACGAGCCTGAATACGGCAGGCAGTTGGAAAACGAAAATAATTTAGagcaaatataa
Protein Sequence: MALDVDNIEKPQEEQNYKTEEKTLKIEYQENNCSENGVYDEENVALDVDNLEKPHEEESYKTEEKTLKIEFQENLLLEVKPETHVKIEEDSSDDDYKQVNTAADVENIENVEDVADEEKYKTEERTPKIEYQENSRQRKLNKLKSKIQRNKSLKSIQSLKKKKSPSSETRVQSKNVEIQQLDSGDPESTQTKQFKSTFKTVDTADGPVYYCLTCMDSFKCRQTLKVHMTEQHATFHCNICQRNFKKEEKLKIHTRTHYARYECNICGIKLKRYPTLLKHITSHTQAKEKIYTCDLCKKDFKYRSTIIKHFEYHKGIHRKFVCEVCGKSFNDRTNLNIHVRNVHDKLKLFKCDQCPKIYATNKTLKIHLRTHTGERPYKCDFCDKTYTSSTAVGQHKKRVHHNDPSILNGIKSYKCKICGERCYGRGKFAAHTREHIGRKPYLCHICNKDFTCKYSLNRHIQAHEGVGKVACELCDKVFTQKSLMKRHMSNIHDPNKAFRQKTKCDLCKMAVVNMEKHMKSHMGRSLLCSYCPKTYSEGNALNRHIKERHSGISFSCNLCPKKYMKQRSLHRHILKVHNIQLKNEPEYGRQLENENNLEQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -