Mmin024732.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- Taar5
- Assembly
- GCA_034621355.1
- Location
- JAXAVZ010000166.1:727990-772531[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.019 1.3 10.3 1.5 1 23 110 132 110 133 0.95 2 14 0.00098 0.068 14.4 4.6 1 23 137 159 137 159 0.99 3 14 0.01 0.7 11.2 1.0 1 20 196 215 196 217 0.91 4 14 0.35 24 6.3 5.2 1 21 230 250 230 255 0.91 5 14 7.3e-06 0.0005 21.1 0.3 1 23 264 287 264 287 0.96 6 14 3.2 2.2e+02 3.3 0.4 1 9 293 301 293 302 0.90 7 14 7.3e-06 0.0005 21.1 0.3 1 23 316 339 316 339 0.96 8 14 3.2 2.2e+02 3.3 0.4 1 9 345 353 345 354 0.90 9 14 7.3e-06 0.0005 21.1 0.3 1 23 368 391 368 391 0.96 10 14 3.2 2.2e+02 3.3 0.4 1 9 397 405 397 406 0.90 11 14 7.3e-06 0.0005 21.1 0.3 1 23 420 443 420 443 0.96 12 14 0.0054 0.38 12.0 2.5 1 23 449 472 449 472 0.96 13 14 3.6e-05 0.0025 18.9 0.4 3 23 483 503 482 503 0.97 14 14 0.00024 0.017 16.3 0.4 2 23 510 532 509 532 0.96
Sequence Information
- Coding Sequence
- ATGAAGTTGAAAGACATATGCTGTACTTGTTTAAGTGTTGAAAGGACTTTAACTCCGCTGAATTGTATAAAAGATGGTGTGAAAAATCTGTTTTCCTTACTTTCGCATCATTTGGATGATAATCAGGTGCTTCCTGACGGAAAGCACTACTACATCTGCTGGGAGTGTGCTGCTCTTCTCAGAAGGCTATGCAGCTTCAGACACCAGGCTGTAGTGGCTAGAAGGCAGCTGATAGATATCCTCGACGACGCACTTAATGTACAAAAATCACCGCCCAAAACAAGGCGCCCAAGAAAAGTTCAGAAGAAATCCAAGGAAGACTCCACTTACCCCTGCGCTGAGTGCGGACAGATTTTTACCACTTACACGCGTCGATACGAGCATATCATGAAGCACCACAAGGAAGGCTACCAGTGCTCCACTTGTGGGAAGAAGTTCCACATTAAGAAGTCTTTTTTGAGGCATGAGAGGGTGCACATAGCAAAAACCTTACCCCGCCAGAAGTGCCCCATCTGCTCAGCCATGGTACGCACGGACCTGGTGCTCTTGCACGCGGCGCGGCACGCCAGCGCGGACCGCGGCACGTACCACTGCGCGCCGTGTCAGAAGACGTTCGCCAACAACAACTCTTATAGGAAACACATGACTGAGGCCAAAGCGCACCGCGTGCCCGACACTGACAACAAATACTCGTGCGAGACGTGCCACAAGTCGTTCCCAACGCTGCTGCTCTTCAACTGCCACATGCGTTATACGAAGCGACATGCAAAGCACGCTGCCGTCTACCGCTACAAGTGTTCCATGTGCGACAAGAGCTATCGCAGTCCCGCGGCGTTGCGCGACCACGTCAACTACGTGCACATGGGCAAGACGCAGCACAAGTGCACAGAATGCAACAAGGTACTTTTAGCATTTAATTCTGATTTCATTGTACCCAGCTACCGCTACAAGTGTTCCATGTGCGACAAGAGCTATCGCAGTCCCGCGGCGTTGCGCGACCACGTCAACTACGTGCACATGGGCAAGACGCAGCACAAGTGCACAGAATGCAACAAGGTACTTTTAGCATTTAATTCTGATTTCATTGTACCCAGCTACCGCTACAAGTGTTCCATGTGCGACAAGAGCTATCGCAGTCCCGCGGCGTTGCGCGACCACGTCAACTACGTGCACATGGGCAAGACGCAGCACAAGTGCACAGAATGCAACAAGGTACTTTTAGCATTTAATTCTGATTTCATTGTACCCAGCTACCGCTACAAGTGTTCCATGTGCGACAAGAGCTATCGCAGTCCCGCGGCGTTGCGCGACCACGTCAACTACGTGCACATGGGCAAGACGCAGCACAAGTGCACAGAATGCAACAAGGCACTGGCCAGCCCGCAGTGCGTCGCGCGCCACATGAAGCTGTTCCACGGCGGGTACAAGTACCCCAAGAACAAGCTCTGCGACACTTGCGGGAAAGCGTTCTCGTCTAAGAAAGACCTCCGTGAACACGAGTCGGTCCACACCGGCGAGCGGCCGCTGAAATGCGATATATGCGGTGACACGTTCAGACAGAGTGGCGCCTTATACACGCACAAACGACGCGTTCACAAGATGGCCGCCAAGCGCAGCGTGCAGCTCGCCACGACGCCGGACGAAGCTGTCGAGCAGCTCGTGCGGAGCTGCGAGCTTGACGAGGACGAGCTCGTCATTCACAGACTGGCAACACTGTCTCGAATGACTACCAGTACCACCCCAGCCGCGGTTTACGGCGGGCGGCAAATGGAAGAAATGCCACCCAGACCATACGTAGAGTCCAGCACAATGCCGGCGCGCATACTGAGCGCGCGCGAGGCCTCGGTGGAGGCCGCGGAGAGCCCGTTCGCCAACTTGGAGTCCCTGACGCAGGCCGCCATCATCGGCGCCATGGGCATCGCCATAGTCGCCTCCAACCTGCTTATCATCGCCGCCTACCTCAACTTCAAAGGTCTATCGCACGAAGTGATAAACTACTATCTGCTATCACTAGCAGTGGCCGATCTGCTCTGCGGTCTATTCGTCGTCCCGCTCTCAGTGTACCCCGCACTGACAGGACGGTGGATGTTCGGCAACTTCATGTGTCGACTAGCCGGGTACATAGAAGTGACGCTATGGTGCGTGACAGTGTACACATTCATGTGGATATCTGTGGACCGCTACTTGGCCGTGAGAAAGCCGTTACGATATGAGACGGTCAGTTTGACGGTAGATATCAATTTTTCTTACTTCCCTCAAGCCCGGATGATCTGGTTCTAA
- Protein Sequence
- MKLKDICCTCLSVERTLTPLNCIKDGVKNLFSLLSHHLDDNQVLPDGKHYYICWECAALLRRLCSFRHQAVVARRQLIDILDDALNVQKSPPKTRRPRKVQKKSKEDSTYPCAECGQIFTTYTRRYEHIMKHHKEGYQCSTCGKKFHIKKSFLRHERVHIAKTLPRQKCPICSAMVRTDLVLLHAARHASADRGTYHCAPCQKTFANNNSYRKHMTEAKAHRVPDTDNKYSCETCHKSFPTLLLFNCHMRYTKRHAKHAAVYRYKCSMCDKSYRSPAALRDHVNYVHMGKTQHKCTECNKVLLAFNSDFIVPSYRYKCSMCDKSYRSPAALRDHVNYVHMGKTQHKCTECNKVLLAFNSDFIVPSYRYKCSMCDKSYRSPAALRDHVNYVHMGKTQHKCTECNKVLLAFNSDFIVPSYRYKCSMCDKSYRSPAALRDHVNYVHMGKTQHKCTECNKALASPQCVARHMKLFHGGYKYPKNKLCDTCGKAFSSKKDLREHESVHTGERPLKCDICGDTFRQSGALYTHKRRVHKMAAKRSVQLATTPDEAVEQLVRSCELDEDELVIHRLATLSRMTTSTTPAAVYGGRQMEEMPPRPYVESSTMPARILSAREASVEAAESPFANLESLTQAAIIGAMGIAIVASNLLIIAAYLNFKGLSHEVINYYLLSLAVADLLCGLFVVPLSVYPALTGRWMFGNFMCRLAGYIEVTLWCVTVYTFMWISVDRYLAVRKPLRYETVSLTVDINFSYFPQARMIWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -