Mmin017110.2
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- -
- Assembly
- GCA_034621355.1
- Location
- CM067898.1:9774048-9814417[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 1e+02 4.4 0.4 1 23 490 512 490 512 0.95 2 13 0.00024 0.017 16.3 2.5 1 23 529 551 529 551 0.97 3 13 3.1e-05 0.0022 19.1 3.0 1 23 557 579 557 579 0.99 4 13 4.9e-06 0.00034 21.6 2.7 1 23 586 608 586 608 0.99 5 13 1.1e-05 0.00078 20.5 0.1 1 23 614 636 614 636 0.93 6 13 2.2e-06 0.00015 22.7 0.1 1 23 642 664 642 664 0.98 7 13 7.2e-06 0.0005 21.1 2.1 1 23 670 693 670 693 0.96 8 13 0.2 14 7.1 1.7 1 13 699 711 699 713 0.91 9 13 0.58 40 5.6 1.4 9 23 1114 1129 1112 1129 0.90 10 13 0.0017 0.12 13.6 3.7 1 23 1135 1158 1135 1158 0.95 11 13 0.00022 0.015 16.4 1.3 2 23 1165 1186 1164 1186 0.97 12 13 3.8e-05 0.0026 18.8 1.5 1 23 1192 1214 1192 1214 0.97 13 13 0.0048 0.33 12.2 0.4 1 23 1220 1244 1220 1244 0.94
Sequence Information
- Coding Sequence
- atgaatggatgttttaTATGCAACAAAGTCACTGTGAGGAATGCTGTAAACATATTTGGGGAGttaccATTCAAATCTGGGAAAAGTATCACCACAGTAATCAGTGAAATAATAGATAAAGAAATCAACAAAAGTGCTGTACACAATGAGGCGCTGTGTAAGAAATGTCAAAAGTTTGTATTGGAATACGACTCGCTACAAGTGAGggcaaaattaattaagtatgaGCTTACAGAgagtttcaaaaaatcattatcaaGTCACAATCTCAATTATGATACCTACGAGGAGGTTCCGAAAGTCAATATACTGGCGAAAAAGGCTGAACCAAAGAAGATTGTGTTGCCAGCGTCCAAGTTACAACCTTTGCCTCCGGACTTTTTCTTGACAGGCGGGAAATGGTCAACGACTAACTCTGTATCAACAATGCCTAAAATTAAGAATGTAATGACCCTACCGTCGTCGTCAACTCTAAACCTGAAGGTCACAGTTGGCTCCTCGGTATTGACCCAAAGCATCAACACCAACACGATAGCGAACAAAACCAAATTGGCCCAAAATATTATACCAAATTTGACCATAGACCCCAAATTAATAATGACGACGAAAGAAAACGCGCAAACCGACCATAAATACGCGCACACGACGAAAGACGACCACAAATATTCGTTAGATTTCACGACCAAATCGGCCGTCGTCGTCGATCCTAAATTGACGAACCAAGTTTCGCCGAGTAAAACAAATTCCGTTCTAACTTTCAACGTGAACTCATTGCCAAAAGATTTTCTTTCGTCCGCCATTTTAAAAGTGGATGGCGATTTTGATAGAACTTCCAATGATGgtgttgataataatttagaGAATAACGACGACCAGCCGATGGAAATTGATGAagATTGTTCGATGGCAGTGTTAACGAAAAAATCTCGAGACAGGTTACTGTTTGATGAGGATATTATAAAGGTAGAATTGGAAGAGGATAAGTCCCAGTACTTGGATATGAAGCTGCTGGGGGGTGGTCAGGGACAGTACGTGTTGGGGAAACTCATCCTGCAAGAAGACGACGCGGACAACGATAACGACAACGACGCCGAAGAACACACGATAGTGATGGACGGATCGGACGGGTCGATACTGCGCGTGGTGTCGGGACAGAAGCTGGTCTACGACGCGGACGGGAAACTGACGCTCGTGGCGGGCGACCTGGACGCCAATGACAACGGCGACACGCAAGGTGGTGCGTTTCTAAAAGTAGGGTCAGGTGAAATGTATAGAGTGGAGTCTGTAGAGAGCAAAACTGAGGAAGACGGCTTGAAGCTGGAGACACAGTCGGCGaTGATTGTGAATGAAGATGGACAATTTCGGTGTCTAATGTGTGAGAGAAACGAAAATAAAGGAGAGCCAATATTCGTGGGTGATTCAGATGCCACTATGGAGCACTTGAAAAGCTACCACTCTGCTCGGTTGTACATCTGTCGCGTGTGCGGACACATCGAGAGAAAGAGAAGCGACTATGCGCTTCATATGGAGGAACACAACGCGGGCGACAAGAGCTTGGCACACGCTGCTCTGAAGGCAAAGTTGCACGAATGCGTCGTCTGCGATAAGAAGttccaCACCAAGGCGCTGCTGAACGGGCACATGAACATGCACAGCGGGTCGCGCCCCTACTCGTGCAGCGTCTGCCGCAAGTCCTTCGCCTCCAAGTACACCTACCAGTCGCATCTCAAGACGCATCTCGACCGTCCCCGTCCGTTCAAATGTCAACAATGCGACAAATCGTTCTTCACGCCGCAGAACTTGACGCAGCACGAGAAAACGCACTCCAACATTAAGGACTTTGTGTGTAACATATGCGGCAAAGCGTTCGGCACTCAGCACAACCTGGAAGTGCACGGCGTGGTCCACTCGGGCAACAAGCCGTTCGTTTGCGAACAGTGCGGAAAGGCCTTCGCGAGACGCGCCGAGGTCAGGGACCATATGAGGATACATACAGGCGAGCGTCCGTTCAAATGTGACGTGTGCGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGCGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGCGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGTGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGCGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGCGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGTGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCGCAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGTGGAGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGGTGAGTGGCTAGCCTACCTGACAAATGTGACGTGTGTGGAGCGTGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGCGAGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCATCTCGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAAGTTCAAGAGACGACGTTTGCTCGACTACCACATAAAGGCGTCGCACACGGGCGAGCGGCCGCTGGTGTGCGAGGTCTGCCACGCCACGTTCGTGTACCCCGAGCACTACAAGAAGCACGTGCGCATCCACAGCGGCGAGAAGCCCTACACCTGCGAGGTGTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTGGTGTGCGGCGCCGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGCggACATCTAGCAGAGTCGATAGTTGTGAATCAACCGAGGGTCACAAAATTAGGTGATAATATTTACACAACCTCTGAAGAATCGCAAGATTTGACAGTTGAAGATAAAAATGACAACGTGGAGGGTGATTTGAAGGCTGAAGAGACTATGATAGACCACTTGCCAGATGACGGCTTAAATGTTGACCAGGCAGGTCCGATCCGGTTGGTGCCCATCGAACTGCCCGACGGCACCAGCGGCTGGGTAGCCATCAACGCGTAG
- Protein Sequence
- MNGCFICNKVTVRNAVNIFGELPFKSGKSITTVISEIIDKEINKSAVHNEALCKKCQKFVLEYDSLQVRAKLIKYELTESFKKSLSSHNLNYDTYEEVPKVNILAKKAEPKKIVLPASKLQPLPPDFFLTGGKWSTTNSVSTMPKIKNVMTLPSSSTLNLKVTVGSSVLTQSINTNTIANKTKLAQNIIPNLTIDPKLIMTTKENAQTDHKYAHTTKDDHKYSLDFTTKSAVVVDPKLTNQVSPSKTNSVLTFNVNSLPKDFLSSAILKVDGDFDRTSNDGVDNNLENNDDQPMEIDEDCSMAVLTKKSRDRLLFDEDIIKVELEEDKSQYLDMKLLGGGQGQYVLGKLILQEDDADNDNDNDAEEHTIVMDGSDGSILRVVSGQKLVYDADGKLTLVAGDLDANDNGDTQGGAFLKVGSGEMYRVESVESKTEEDGLKLETQSAMIVNEDGQFRCLMCERNENKGEPIFVGDSDATMEHLKSYHSARLYICRVCGHIERKRSDYALHMEEHNAGDKSLAHAALKAKLHECVVCDKKFHTKALLNGHMNMHSGSRPYSCSVCRKSFASKYTYQSHLKTHLDRPRPFKCQQCDKSFFTPQNLTQHEKTHSNIKDFVCNICGKAFGTQHNLEVHGVVHSGNKPFVCEQCGKAFARRAEVRDHMRIHTGERPFKCDVCGASFTQRSNLHSHKRATHLDDKRYHCTQCPKKFKRRRAPRSSRDDGEWLAYLTNVTCAERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCAERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCVERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCAERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCAERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCVERASRSAPTCTRASAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCVERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDGEWLAYLTNVTCVERASRSAPTCTRTSAPRISTTSATTARSAPRSSRDDASFTQRSNLHSHKRATHLDDKRYHCTQCPKKFKRRRLLDYHIKASHTGERPLVCEVCHATFVYPEHYKKHVRIHSGEKPYTCEVCGKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSGHLAESIVVNQPRVTKLGDNIYTTSEESQDLTVEDKNDNVEGDLKAEETMIDHLPDDGLNVDQAGPIRLVPIELPDGTSGWVAINA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -