Mmin000609.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mycalesis mineus
Gene Symbol
-
Assembly
GCA_034621355.1
Location
CM067881.1:11128119-11138154[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.011 0.78 11.0 0.0 2 23 200 222 199 222 0.94
2 16 6.9 4.8e+02 2.2 0.3 6 23 232 249 230 249 0.92
3 16 0.11 7.4 7.9 5.6 1 19 282 300 282 305 0.95
4 16 1.3 92 4.5 0.4 6 23 315 332 313 332 0.95
5 16 0.04 2.8 9.3 1.7 3 23 340 360 338 360 0.96
6 16 7.9e-05 0.0054 17.8 3.3 1 23 368 390 368 390 0.97
7 16 9.2e-05 0.0064 17.6 0.4 1 23 399 422 399 422 0.98
8 16 0.00042 0.029 15.5 0.2 1 23 428 450 428 450 0.97
9 16 6.9e-07 4.8e-05 24.3 2.1 1 23 456 478 456 478 0.98
10 16 0.00036 0.025 15.7 0.8 1 23 483 505 483 505 0.98
11 16 5.6e-06 0.00038 21.4 4.2 1 23 511 533 511 533 0.97
12 16 0.00025 0.018 16.2 2.9 2 23 540 562 539 562 0.95
13 16 0.99 68 4.9 0.5 8 23 581 597 580 597 0.92
14 16 0.00025 0.018 16.2 2.9 2 23 633 655 632 655 0.95
15 16 0.00025 0.018 16.2 2.9 2 23 722 744 721 744 0.95
16 16 0.99 68 4.9 0.5 8 23 763 779 762 779 0.92

Sequence Information

Coding Sequence
ATGGCTCAGAATATAAAGGAATTGTGTCGTCTTTGTGCAAAAGGCGAAGGGTTTACCAAAGATTTGATAGATGAAAGCAATAGGAATATTCTTAAAATGATACAGGAATATGTACATATATCTgtaAATGAAAGTGATGATTTACCCACAAAAGTGTGTCTGAATTGTGAAGAGAAAATGGTGTCATTTGAGCTGTTTGTTTTGGAATGTCTGAAGGTGCAAGAGACATTGAAGAAAATGTGTTTAGGAACGTGCTCTGTTCAGACATGTCCAGTTAAATTTGAGTCTGATGTTATAGAATTTGGACTCCCACCAATAAAGTCTGAGGTTAAAGTGGAATTGATGCCAGAAGAGTTAGTAAATGCCATAAACAATGATGAATCATTTGGTGATGATAACTTTGATGCTGACAACTTCAGCAACAGTGACGTGAAACAGGACAGCGACGGTGATCTGAGCGATGCTATGACATTAGCAACACTTAAAAAAACTAAGGCGAAAAAGACCAAAAGAAAGCAAATAAGTGAAGAAGAAaagattgaatttaaaaatgtactcaAGAAATCTAATTTAAATGTTAAGGACTTTGTTAAattAGAATGTAATATGTGCGAAGAAGCGATGTCAACGTGGAGCGCTCTACGAGTCCATTACGCGAAAGTGCACAAAAGCAAACCGATGGTGTTCTGTCTGTGCGGCTTCATCGTCAGATCGAAAAGTGTTCTTTACAAACACGTTTCCGATCACCGGATAGAGAGCCGTAAACTTAAGAAGAATGACTCAGATGCTGAGAAAACTGAGGAATCCAAATATTCAAGTTTAAATGTCAACGATTTTGTTAATTTCTCGTGTTCATTCTGTGAGAAGGAATGCAAGAGCTGGTACAGTTTGAAGGCGCATTGCGAGGGCAAGCACAACACGACGCCCGTGGTGCGCTGCAGCTGCGGCATTACTCTCAAATCTAAATCTGTTCTGTACAAACATGTTCAAGATCACAAAAACCCCAATGTTATCTGTTGCGACAAATGCCCGCGGATAACTAAAACCGAGGCGGCTATGAACAAGCACAAAATGCGCCACGTGCCCAAATCAGAGAGGAAGTTCTGTTGCGGCTCCTGCGACAAAGTGTTTAATTCTAAGGACACGTTGAAATCCCACGAAAGATCGCACATACctatagaagaacgaaaaataTACAGATGTGAAATATGCGATCTAAAGTTCACGACGCGCTCGTCGGCCGCGTCGCACAAGCGCGTGGTGCACGAGAAGATCAAAAGCTACGTGTGCGACCTGTGCGGCTACGCGTGCGGCACCAACGGCGAGCTGCGCCAGCACCGCGCCATCCACAGCGAGGACAAGCCCTTCGTGTGTAACACCTGCTCCAAGCCGTTTAAAACGTATTCGAATCTGAAGACGCACATGGACACGCACGAGGACACGTCGTACGTGTGCTTCGTGTGCAACCGCGTGCTCAACAGCCGCCGCACGCTGCGCAAGCACCTGCTGGTGCACGAGGACAAGTGCCGCCACGTGTGCTCCTACTGCAACAAGGCCTTCAAGCGCAGGCAGACGCTTAAGGTGCACATGTACACGCACACGGGCGACAAGCCGCTGACGTGCAAGTGGTGCGACGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGGTGCAGTACTCCACCTACAACACGCACGTCGTCATGCAGGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGGTGCAGTACTCCACCTACAACACGCACGTCGTCATGCAGGAGGTGAGCTCacatacatatacacacacGCTCACGAGCGACAAGCCGCTGACGTGCAAGTGGTGCGACGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGCGACAAGCCGCTGACGTGCAAGTGGTGCGACGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGGTGCAGTACTCCACCTACAACACGCACGTCGTCATGCAGGAGGTGAGCTCACATACATATACACGCTCACGGGCGACAAGCCGCTGACGTGCAAGTGGTGCGACGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGGTGCAGTACTCCACCTACAACACGCACGTCGTCATGCAGGAGCGGTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGGTGCAGTACTCCACCTACAACACGCACGTCGTCATGCAGGAGGGATATATCAAGAACGACTTGCCTCTGAACATTGCGAAGACCGACGTAGATGCTAttcaataa
Protein Sequence
MAQNIKELCRLCAKGEGFTKDLIDESNRNILKMIQEYVHISVNESDDLPTKVCLNCEEKMVSFELFVLECLKVQETLKKMCLGTCSVQTCPVKFESDVIEFGLPPIKSEVKVELMPEELVNAINNDESFGDDNFDADNFSNSDVKQDSDGDLSDAMTLATLKKTKAKKTKRKQISEEEKIEFKNVLKKSNLNVKDFVKLECNMCEEAMSTWSALRVHYAKVHKSKPMVFCLCGFIVRSKSVLYKHVSDHRIESRKLKKNDSDAEKTEESKYSSLNVNDFVNFSCSFCEKECKSWYSLKAHCEGKHNTTPVVRCSCGITLKSKSVLYKHVQDHKNPNVICCDKCPRITKTEAAMNKHKMRHVPKSERKFCCGSCDKVFNSKDTLKSHERSHIPIEERKIYRCEICDLKFTTRSSAASHKRVVHEKIKSYVCDLCGYACGTNGELRQHRAIHSEDKPFVCNTCSKPFKTYSNLKTHMDTHEDTSYVCFVCNRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFSYASTLRSHRLRCHPDKMAVQYSTYNTHVVMQERFSYASTLRSHRLRCHPDKMAVQYSTYNTHVVMQEVSSHTYTHTLTSDKPLTCKWCDERFSYASTLRSHRLRCHPDKMARQAADVQVVRRAVLVRVHAALAPPALPPRQDGGAVLHLQHARRHAGGELTYIYTLTGDKPLTCKWCDERFSYASTLRSHRLRCHPDKMAVQYSTYNTHVVMQERFSYASTLRSHRLRCHPDKMAVQYSTYNTHVVMQEGYIKNDLPLNIAKTDVDAIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-