Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: CM067898.1:5705276-5707569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00075 0.052 14.7 2.4 1 23 59 81 59 81 0.96

2 16 0.38 26 6.2 0.0 2 23 109 131 108 131 0.88

3 16 0.056 3.9 8.8 4.8 2 23 152 174 151 174 0.94

4 16 6.3e-05 0.0043 18.1 0.7 1 23 179 202 179 202 0.96

5 16 6e-05 0.0042 18.2 1.9 1 23 207 230 207 230 0.95

6 16 0.27 19 6.7 0.1 2 20 233 251 233 252 0.94

7 16 0.041 2.8 9.3 5.6 3 22 261 280 260 280 0.95

8 16 0.00052 0.036 15.2 1.2 1 23 331 354 331 354 0.95

9 16 1.2 83 4.6 0.1 2 23 382 404 381 404 0.90

10 16 5.8e-06 0.0004 21.4 0.3 2 23 427 449 426 449 0.96

11 16 1.3e-05 0.00088 20.3 0.1 3 23 456 477 455 477 0.94

12 16 0.05 3.5 9.0 4.7 2 23 482 504 481 504 0.94

13 16 0.00029 0.02 16.0 4.2 1 23 509 532 509 532 0.95

14 16 5.6e-06 0.00038 21.4 4.5 1 23 536 559 536 559 0.98

15 16 0.00031 0.021 16.0 0.3 2 23 566 587 565 587 0.96

16 16 2.5e-05 0.0017 19.4 0.6 1 23 593 615 593 615 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00075	0.052	14.7	2.4	1	23	59	81	59	81	0.96
2	16	0.38	26	6.2	0.0	2	23	109	131	108	131	0.88
3	16	0.056	3.9	8.8	4.8	2	23	152	174	151	174	0.94
4	16	6.3e-05	0.0043	18.1	0.7	1	23	179	202	179	202	0.96
5	16	6e-05	0.0042	18.2	1.9	1	23	207	230	207	230	0.95
6	16	0.27	19	6.7	0.1	2	20	233	251	233	252	0.94
7	16	0.041	2.8	9.3	5.6	3	22	261	280	260	280	0.95
8	16	0.00052	0.036	15.2	1.2	1	23	331	354	331	354	0.95
9	16	1.2	83	4.6	0.1	2	23	382	404	381	404	0.90
10	16	5.8e-06	0.0004	21.4	0.3	2	23	427	449	426	449	0.96
11	16	1.3e-05	0.00088	20.3	0.1	3	23	456	477	455	477	0.94
12	16	0.05	3.5	9.0	4.7	2	23	482	504	481	504	0.94
13	16	0.00029	0.02	16.0	4.2	1	23	509	532	509	532	0.95
14	16	5.6e-06	0.00038	21.4	4.5	1	23	536	559	536	559	0.98
15	16	0.00031	0.021	16.0	0.3	2	23	566	587	565	587	0.96
16	16	2.5e-05	0.0017	19.4	0.6	1	23	593	615	593	615	0.97

Sequence Information

Coding Sequence: ATGAAGAGGAGATTCCACTTCGATAAGAGCGGGAAGAAGTTCCTGTGGAAGAAGTATTTGACAAAGTCATGGCATGAAACGCCGCACGAGACCTGCACGTCTGTGCGAAGAAGGAAAAATTTACAAACGCTGTTCAACAACAGCACAATACTGCCATTCAAATGGCGCGGAAAGTACCTCTGCTTCTATTGCGGCGCGAGTTATGTTGATCATGCGCAGTTTAGGAGACACACTAAGAGCCACGGGCCATGCACTATCAATGATCATTCCTTGAAACATATTAAGGGCAGTCACATCGAACTCAAAATCGATATATCTGAAATTACTTGCGAAATCTGCCAAGAACCATTTGAGAGTTTCACGGAAATTGTAGACCATTTGATTGGCAAACATGACTTAGAATACGACAAAACAGTAAATATCCCATTCCAGGAGTACAGATTGGTCGATTGTCAATGTTGTTTGTGTGAACAAAAGTTTACATATTTCGGCAATTTAATAACGCACACTAACAACGCACATCCAAAAAACAGTTTCATATGCGATAATTGTGGCTTAACTTTCAATAAAAAGAGAGATTTGGCGCTgcatttaagaaattttcacagAGATGGAGGCCACAGATGCGAAGAGTGCGAAAAAGTTTTCTCCACTCGAGTCCTTTTGATTAATCACAAGAACAATTTCCATTTTAGAAGATGTCAACTGTGCGAAGCGTATTTTCCTTCTTACACCTTACTTCAGAAGCACGTGGAGTGCGATCATCCTGATCAAAAGATCTGCTCGCACTGTACCAAACAGTGTAAAAATACAGCTAGTTTGAAACATCATCTCAGAAGTTGCGGTCTGAAATATCACAAAGTGAAAGTGCCTGTTTTTCCTGAAGAGACTTTACAACCGAAGAAGAAAAGGGATATAACGCAGATAAGGAAGAATATCCAATGTATTCTAAACATGTCGACCGCTATACCGTTTAGATTCTTTTCCCGGTTTTCATGCTTCCATTGTTCCAAAAATTTCATCGATTTCGAAGAGCTGAAAGCCCACGTAATTAGCGAACATCCTATTTGCAATTTAAACGATAAGAGCATGAAAAAGTGCAAAGGGGAGAGGATCACAGTTAAAATAGACATCTCTGAGTTGTCATGCAAAGTGTGCTTTCAAAGAATAGACAATTTGAACGATCTGATAGATCATTTAATAGCGAAACATAATGCCACTTACGACAAATCCATAACGGAATGTTTCGATTCCTTCAAAGTGGTCAAAGATAATATACCGTGCAATGTTTGTCCGAAATCGTTCAGATACTTTAGCACACTTCTCCGTCACATAAATTCAGAACACAGCAACAACAACAAGATATGTGATTACTGCGGTCGTACGTTTAAGAACGTGGCCAATTTGAATGTGCACATAACGTACGCGCACACGGGCGCGTGCGAATGTTTGGTCTGCGGCGCTAAGTACAAGAACCAATGGTGCTTGGGGCGGCACATGGCCAAATGCCACAACGCCAAAGACTTCCAATGCACCAAATGCACGGAACGATTCCGTTCTCAGTACCACAAACAGAAGCACATGATTGAGGCCCACGAAATAGGACACAAATGCAGTTACTGCGACAAAATGTTCACAAGAAACTCCTTTATGAAGGACCACATCAGGAGGATACATTTGAAAGAGAAAAACGTTCCTTGTTCTGTGTGCAATGAGAAGTTCTTCGATAACTACCTCCTCAGATTGCACATGGTGAAACATAAGGGCGAAAGGAACTTTAGTTGTGAAGTCTGCGGCAAAGCTTTTCTGAGGCGGAGTAATCTGAATAGTCATAAAGAGATGCACAAGAAATATGGACATGTTTGA
Protein Sequence: MKRRFHFDKSGKKFLWKKYLTKSWHETPHETCTSVRRRKNLQTLFNNSTILPFKWRGKYLCFYCGASYVDHAQFRRHTKSHGPCTINDHSLKHIKGSHIELKIDISEITCEICQEPFESFTEIVDHLIGKHDLEYDKTVNIPFQEYRLVDCQCCLCEQKFTYFGNLITHTNNAHPKNSFICDNCGLTFNKKRDLALHLRNFHRDGGHRCEECEKVFSTRVLLINHKNNFHFRRCQLCEAYFPSYTLLQKHVECDHPDQKICSHCTKQCKNTASLKHHLRSCGLKYHKVKVPVFPEETLQPKKKRDITQIRKNIQCILNMSTAIPFRFFSRFSCFHCSKNFIDFEELKAHVISEHPICNLNDKSMKKCKGERITVKIDISELSCKVCFQRIDNLNDLIDHLIAKHNATYDKSITECFDSFKVVKDNIPCNVCPKSFRYFSTLLRHINSEHSNNNKICDYCGRTFKNVANLNVHITYAHTGACECLVCGAKYKNQWCLGRHMAKCHNAKDFQCTKCTERFRSQYHKQKHMIEAHEIGHKCSYCDKMFTRNSFMKDHIRRIHLKEKNVPCSVCNEKFFDNYLLRLHMVKHKGERNFSCEVCGKAFLRRSNLNSHKEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205378;
90% Identity: -
80% Identity: -