Mmin004905.2
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- -
- Assembly
- GCA_034621355.1
- Location
- CM067885.1:5866069-5875019[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.013 0.89 10.8 0.9 3 23 656 677 655 677 0.94 2 22 0.061 4.2 8.7 0.6 1 22 1056 1077 1056 1077 0.95 3 22 8.8 6.1e+02 1.9 0.3 1 22 1120 1141 1120 1143 0.82 4 22 7 4.8e+02 2.2 0.4 3 14 1154 1165 1153 1173 0.80 5 22 0.019 1.3 10.3 0.1 3 23 1223 1244 1221 1244 0.94 6 22 0.045 3.1 9.1 4.3 1 23 1250 1273 1250 1273 0.95 7 22 0.16 11 7.4 0.0 1 23 1299 1322 1299 1322 0.90 8 22 0.025 1.7 10.0 3.4 1 23 1327 1349 1327 1349 0.97 9 22 0.05 3.5 9.0 0.3 1 23 1355 1378 1355 1378 0.94 10 22 0.0014 0.094 13.9 1.3 1 23 1390 1412 1390 1412 0.98 11 22 0.0019 0.13 13.5 4.0 1 23 1455 1478 1455 1478 0.96 12 22 0.002 0.13 13.4 1.6 1 23 1539 1562 1539 1562 0.96 13 22 0.0015 0.1 13.8 2.2 2 23 1586 1608 1585 1608 0.95 14 22 0.052 3.6 8.9 0.1 2 23 1614 1636 1613 1636 0.94 15 22 0.013 0.9 10.8 0.2 1 21 1680 1700 1680 1701 0.95 16 22 0.0016 0.11 13.7 0.6 1 23 1711 1733 1711 1733 0.93 17 22 0.00012 0.008 17.3 0.3 2 23 1826 1848 1826 1848 0.93 18 22 2.3e-07 1.6e-05 25.8 1.1 3 23 1855 1875 1854 1875 0.98 19 22 0.86 59 5.1 0.1 1 23 1893 1916 1893 1916 0.92 20 22 0.053 3.7 8.9 0.0 1 23 1937 1959 1937 1959 0.98 21 22 0.036 2.5 9.4 0.6 1 23 1965 1988 1965 1988 0.95 22 22 0.00039 0.027 15.6 0.6 1 23 1996 2019 1996 2019 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGGTGTGAATTACTACCTATATTTCCTACCACCAGTTCGGATGACTCGGATCCTCCTGTCCTCGCTTCGAAAATAAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGATGACCTGCCTACCAATGTCTGCAGGAAATGTGTGGACAATGTCAACAACTGGCACATATTTAAGGCTGTTTGTGAAAGGAGCCAAAACAAATTACAGTCTCTGACTAATAAGGAAAGCAGCCAACTAGAAGAGttgaACATAAAAAGTGAACCTCAGTCTGATGAAGCCTATGATGATGGAGTGGTCATTGATGGGTCATACCCTGACAGTGAGAATGCTGGACCATCAAGTAAAGTGCAACCAGAGGGTCCCCCTATTTTGGCTTCGCTGGGGCTTACACCAAGGAGTGATAAGAAACATATAGATCCAAGAATGGACTGGCAACGTGTACATGCTATATTGGACATGGTCCAAGAAGACGAAGTTATTGACTCCCTACAATCAATGGAAGAGAGCGATGTCATACATCAATCTGATCATGACTCTGAGACTGAGATAGAGCTCACGAAAGATGCCATCCACGATGACTATGTCGATTACAAGAATGGGTACTTGTGTAAAAACAGGAAAGTTATCTCCAAAGCACCTAAATTTACACTCGAGGATACCATTGCAAGAATAAAGGAGGTCAATAATATGAGTAAACGTAGCTTTGTTTCCAACAAGCATTGTGCTCAACCGAGAACTGCTTGGCAGATGCTTTTCACAGATGACTTGCTGGAACTCATAGTCACTTCGACAAATGAGAGGATTGCCATTAACTGTAGAAAAACAAAACCAACAAGCATTACCGAGATTAGGATGTTAATTGGTATTTTGTATTATCACGGCATAATGAGACCGACACATCAAAAGATAAGTGACCTCTGGCATGAAGACTATGGTGCTATTTGTGTACGAAACGCCATGCCCTATGAAAGATTTAGGTTAATTCTGGAAAACATGAGCTTTGACAGTCAGGTTGATGACAGCATTGTACAGTTTGACGTGATGAAACGCGTGCGCAAAGTTTTCGAAATATTTGCGCTCAATTGTAGGACCGCTATGGAGGTTGGAAAACAGTTGGTCCTTGATGAAACAATATTACCAGTGCACGGCCCCTGTCCATTCCGATATAAAATAAAGAGGAAGACATTAAAATGTGGAATTAAAATTGTGCTCCTGATAGATCCAGTAAATTTTTACGTCACTAATCTCGATGTGATCACTGATCCATACTTTGGATGTGAGGAAATAGCTGCAAAGTTGGTGCAGCACTTGGCTGGGACTGGTCGAACTATCATTATGGACAGTTGGTTCACATCGCACTCATTGATCAACAGATTGAAAAGTGAATACAGCTTATTCACAATAGGAGCACTTCATCCTAACGATGATAACATACCTCCTCTTTTCTTATCACACTATAGAAAGAAAAAGACTTTTATAAGTGGATTTATGGACGAAGATATGACATTGAGTTCATTTGTCAATCACAATTCGAAAGTTGTCAATGTACTGACCAACGACCCAaagttttataagaaagggcacagCAGTCATACATCAGTTGTTTCGTTTTACAAAAGGCAACAGTCAGCTGTAGAAGTTCTTGATGTATTGATGCATTATTATACCACGATGCAGCACACGAATGACTGGACTCTATCGTTATTCTTCATGCTGTTAAACATCGGTTGCATTAATGCTCAAGGCATGGATAGTGAAAAGGAGGAGGATTacgaggaagaagaagaagatcggGAAGAGATGAACGAAGAACCTTATAGGAATATGCCCCACATGCCCGAAGTTTCCATCACTGTTATGCGCCCAACTGGCGAAACCCTTCACGCTCGCCAGGGTATTCAACAGATTGCCTCAAAGGATTGCCTAGTTTGCGGCCGCTCTTATAGATATTCTCATAATGCGCGCAGACACGAACTGAGTGCCCACGGTTTCGACAGGTACACTAATAAAACCTCATCAAAGAAATCATCTCATGGTCATATTATGCAACCCAAATTTAGGCCTAATCCCTTCAATCCTAAAGCACGCTTGATGCCTAATCCGATTAGCCACAAGATGCAGTACATGCCAAAACCACCTCCCGCTAAAATGATGCCGCAAAAAATTGTGGCACCGCCAAAACCTATTCCGATCAGAACTGCTAAACCTCCTCAGAATAACTTACCATATCCCCTTCGTATAAAAGCCTTAAAAGACttgcaaataaagaaaaaggagccacaaatattaaaaacgttGCTAACTTCTAAACCTGAAGTTTTAGTATCTGAACCTGAAATAATGAATTCGGGTCCGGAGAGCCCGGAGACATTGATCTCGGAACCTGAAATAGCGTCTTTCCAAGTGGAGACGATCCTATCGGAGCCGGGTGGCTTTATTAACCAACCACACGATGACGATGAGATGGACGATGATCATAACCACGAACAAAATTATGATACAGTTGATATGGAATCCgataatgaaattgaaatagcTCGTCAGCAAGAAAATAATGTTGATGTCGAAGAGAATCATGTTGACAACGATGGTGACGAAAACCCACAAGACGATAACCAGGCGGAAGACGACCAGGAAAAAGAACATAATATGGAAGATAACGGAGACAGTCAAGATGTGAGCGTGCAGAATAATATAGACGCAGAGCATGACGAAAACGCTAAAGAACAAGACGAAGAAAATGGTGAAAAGGAGAATAATTACCAAGAGGAGAATCGCGAGGACATGGACGACGATGAAGATTTGCCTCCAATGAATATCGCCCCTGTGGTAGAAATTAATGAAGATTTACAAACTAACTCTTATAACAGTGAAGGAAATGAGGAAGAAGACCTCGACGAGACAGTTGACCCTAACGATACTGTCGATGGTGATGAAAATATGAAAGTACTAGATCCCGATAAGGTGTACGTAACAAAGACTCAAAGAGATTTCATACTCAAGCATCGTGATATTATAGAGCAAATCAATAccaagctttgtctctgttgtAACAAAGAACATCCTCGCAGAAAAGCTGTTATACAGCATTTACAGAAAAACGGACACAAAGTACCAAAACATACGTGCTACAATTGTGTGGTAACCTTCACACACATCGGAGCTTTACTGAGCCACATGAGATCAAACACTTGCACCGATCTgtggaaaataatttacaacgaAAACGGAATCACTGATGATATAGTTATAGAAGATGAGCCGATACAGGATACAAAAGTTCAATATAAAGACATCCTCAATGCAAGATCTTATGCATGCAAACTGTGTCCTGCCAAATTTCAATTGAAGCAGTTTATAATGAAGCACGTCTTGGACGTTCACGAAGACGGTCAGTCACGAGTTCCCAATTCGTGCGTTCATTGCGGCTTAAGGTTCAAGGAGAGAAGTATCGGCAAAAAGCACATTCGCAACGGGGATTGCACCGTTTATATCGCTTGCGATTTGTGCTCTGAAAAGTTTTTGAACATGCAAGATTTTAATGAACACGCTGTAGCTGTACACGCTGGCAACTTCGACCCTGATAGTCAGAGCAAGTGCGTCGACGGTCGACCGACAGATTGCCCCATATGTGGGAAGAAGAACAGCAGCTACCCAAATTTGGTGAAACATCTGAAAGCAATACACAACGAGGAGAAACCTCATCACTGCCAGCATTGCGAAGCTAAATTTGAACAAACTGCGGATCTTAACAAGCACATTTATATGGAGCACTCGGACCGTATGCTGGGCATGGCGCCTACGGAGCCTGACATGTCTCTCGTGAAGGAGGAGGCCGAGGAATATCATTACTCTTGTACGGAATGCAACGCCATCTTCGAGACGGTCGACGCTTGGACTGACCACCAGGTCGCGGAACACAACCAGGTCGCCCACCACTGCGATCAGTGTGAAAAGAAATTCTTGCGCCCCTCAGAACTCGCCGAACACAAGAACACACATCTGCGTGTCAAATTCTATCCCTGCAACCTCTGCTCGAACTCGTACAGCACGCCGCAGAAGTTGTCTGAACACGCGCAACAGATGCACCCCGGTGCTCCCGTGCGCAATTTCGATTCGGAATTCTATTGCGATATATGCATACGGTCGTTCAAGAGCCGCCAGGCGTATTCCAATCATATGCGTATTCATTCCAAAGTGCCCACGACTAACAGAAAACCGGGCGAAGCGAAAGGTTTCGCACCTCAGATAGTCGGAAAACCTATACGCCAGTTCTCTATGCAACCGGGATTCAGTCCTTTCGTCCCGAACGCTCCCTACTGTTGCGACATTTGTGGAAAAGGATTCATGCATAAGAAAAATATCTGGAAACATAAGAAAGTGTTGCACGCGGACTTGCTGAACGACAGAGTGGACAGCGAGGAGAACACCATGCACGCGTCTACGGAAGAAGACGATTACAATGTGGACGAAAACGGAGCGATCCTCTCGACTCCacaatttaatagttttaattttgcaaACATTGCCAATAACGTGCCGCAGCAAGCGTCGCCGGAGGCCCTTCCGTACACCTGTGATTTATGCTACAAACGGTTTCCACTTCGAACTAGTCTGTGGAAGCACAGGCGAGCTAAACACGGAATCGCTTATGGAAATACAGGCGGGAACGATGGCCAAACGCCACCCATGACGGCGGAAGGTCGATCGAGTTGCACGATATGCAAAATTACGTTTTCTGATAAGAAATCCTACTACCGTCACAGGAAAAACATTCACAAGTCTTCTGTCCAGATGTGCAAAATTTGCGGAAAGCCGCTCAGCTCCACGCTAGAACTCTACGAACATCTGAAAGCGGCACACGCCCGCGAACTGTTGGGGTACGACGCGAGTCAGGGAACCAGCAAGTCCCAGGATATGGTACAAGAGGGCGAAGCGGACTACGACGGAGACCAAGATCTGATGGATCCCGCTGCCGAATTCCAAGCGCGATATCCTTGCGACACTTGCGGCAAGCAGTTCGTCGGACTGTTGGCCTTGCAAAATCATCAATGTATAAATCAGATACAATCGCAGCCGCAAACGTTCGACTGCGAGATATGCCACAAGAGCTACACCTCGATCGCCGCGTTGAAGAGCCACCGCGGTTGGCATCTGAGGTCCCCCGACGGCAAGGCGGCCGCCAACAACACCGGCCTCTGGATGCCTCAGAACAAAGTGACGACTAAAATTAGCAAGCACGAGGTCATCGAACCGTCCCAACCGCCGGCCACTCGCTCTTCGCAGCCGATAGCGACCACCAGCAACCCGAAGAGAAGGCTGCCGCCGGAGGTGGAGGTGACCGTCGTGAATCCCAACAAGAAGTTGCGGTCCGACGATTCTCTGGAATTGGAACACCAGAATTCTTTGTCCGGGGGACCCGAAGATAGATACTGCAATATTTGCGACAAAGAATTTACCAAGCGAGCTGCGTATCAACGGCACATGGACGAGGTGCATCAGCCGAATTCCGTGTTCTGTCCCGTTTGCGACAAGAGCTTCACGCGAAAGTCCACTCTCATCGTGCATATGAAGAAGCATTACGAAGGCGGGGAGGGATCGTCCGGCTTGGGCCAGATGGAAGACGACGGGCACGCGTGCGACGTCTGCGGCGATCAGTTCGAAAGCGCCAAGGCGATGAACGCGCACAAGGCCGTGCAACACGCGGAGGACTCCGGCGAGTCGGAGGACGACGGCAGCACCATCGTGCAGCAGCCCGGCGAGTTCACGTGCAACCAGTGCGGCGACGGAGTGGCCACGCCCCGCGACCTCATCGCGCACCGCACCATGCACGCCACTCCGTCCAAGTTCTTCTGCAACATTTGCAAGGTGTACTTCGCCCGAGCCCTCGACCTGTCCTCGCACACCCGGGCCAGGCACTCTGACAACGAAAAGGTGTTTTTCCCTTGTGCCATGTGTGACCGATTTTATATGAACAAAAAGAGTTTGCAACGTCACATTGAAATGATGCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRCELLPIFPTTSSDDSDPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKAVCERSQNKLQSLTNKESSQLEELNIKSEPQSDEAYDDGVVIDGSYPDSENAGPSSKVQPEGPPILASLGLTPRSDKKHIDPRMDWQRVHAILDMVQEDEVIDSLQSMEESDVIHQSDHDSETEIELTKDAIHDDYVDYKNGYLCKNRKVISKAPKFTLEDTIARIKEVNNMSKRSFVSNKHCAQPRTAWQMLFTDDLLELIVTSTNERIAINCRKTKPTSITEIRMLIGILYYHGIMRPTHQKISDLWHEDYGAICVRNAMPYERFRLILENMSFDSQVDDSIVQFDVMKRVRKVFEIFALNCRTAMEVGKQLVLDETILPVHGPCPFRYKIKRKTLKCGIKIVLLIDPVNFYVTNLDVITDPYFGCEEIAAKLVQHLAGTGRTIIMDSWFTSHSLINRLKSEYSLFTIGALHPNDDNIPPLFLSHYRKKKTFISGFMDEDMTLSSFVNHNSKVVNVLTNDPKFYKKGHSSHTSVVSFYKRQQSAVEVLDVLMHYYTTMQHTNDWTLSLFFMLLNIGCINAQGMDSEKEEDYEEEEEDREEMNEEPYRNMPHMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELSAHGFDRYTNKTSSKKSSHGHIMQPKFRPNPFNPKARLMPNPISHKMQYMPKPPPAKMMPQKIVAPPKPIPIRTAKPPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPGGFINQPHDDDEMDDDHNHEQNYDTVDMESDNEIEIARQQENNVDVEENHVDNDGDENPQDDNQAEDDQEKEHNMEDNGDSQDVSVQNNIDAEHDENAKEQDEENGEKENNYQEENREDMDDDEDLPPMNIAPVVEINEDLQTNSYNSEGNEEEDLDETVDPNDTVDGDENMKVLDPDKVYVTKTQRDFILKHRDIIEQINTKLCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVIEDEPIQDTKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNSCVHCGLRFKERSIGKKHIRNGDCTVYIACDLCSEKFLNMQDFNEHAVAVHAGNFDPDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKAIHNEEKPHHCQHCEAKFEQTADLNKHIYMEHSDRMLGMAPTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNLCSNSYSTPQKLSEHAQQMHPGAPVRNFDSEFYCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGEAKGFAPQIVGKPIRQFSMQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRVDSEENTMHASTEEDDYNVDENGAILSTPQFNSFNFANIANNVPQQASPEALPYTCDLCYKRFPLRTSLWKHRRAKHGIAYGNTGGNDGQTPPMTAEGRSSCTICKITFSDKKSYYRHRKNIHKSSVQMCKICGKPLSSTLELYEHLKAAHARELLGYDASQGTSKSQDMVQEGEADYDGDQDLMDPAAEFQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKISKHEVIEPSQPPATRSSQPIATTSNPKRRLPPEVEVTVVNPNKKLRSDDSLELEHQNSLSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGLGQMEDDGHACDVCGDQFESAKAMNAHKAVQHAEDSGESEDDGSTIVQQPGEFTCNQCGDGVATPRDLIAHRTMHATPSKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -