Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: JAXAVZ010000277.1:618628-620961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.6e-06 0.00052 21.0 4.0 1 23 6 29 6 29 0.95

2 20 0.18 13 7.2 0.2 2 23 35 57 34 57 0.94

3 20 2.6e-06 0.00018 22.5 0.3 2 23 66 88 66 88 0.97

4 20 0.0015 0.1 13.8 0.2 2 23 96 118 95 118 0.94

5 20 4.4e-07 3e-05 24.9 2.1 1 23 125 148 125 148 0.97

6 20 1.5e-05 0.001 20.1 1.0 2 23 155 177 154 177 0.96

7 20 4.4e-06 0.0003 21.8 3.9 1 23 183 206 183 206 0.98

8 20 1.5 1.1e+02 4.3 0.5 3 23 216 237 214 237 0.75

9 20 0.0038 0.26 12.5 0.7 1 23 246 269 246 269 0.97

10 20 0.0016 0.11 13.7 0.3 1 23 296 319 296 319 0.98

11 20 0.09 6.2 8.2 1.8 2 21 327 346 326 347 0.94

12 20 0.0065 0.45 11.8 1.6 3 23 357 378 356 378 0.96

13 20 0.019 1.3 10.3 5.3 1 23 398 421 398 421 0.97

14 20 0.014 0.98 10.7 3.8 2 23 428 449 427 449 0.97

15 20 4.7e-05 0.0032 18.5 2.2 2 23 456 478 455 478 0.94

16 20 0.014 0.97 10.7 1.5 1 23 484 507 484 507 0.97

17 20 0.31 22 6.5 8.0 2 23 515 537 515 537 0.95

18 20 0.0019 0.13 13.5 0.3 1 23 544 567 544 567 0.96

19 20 0.00043 0.03 15.5 1.4 1 23 574 597 574 597 0.93

20 20 0.0013 0.09 14.0 2.8 3 23 609 630 608 630 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.6e-06	0.00052	21.0	4.0	1	23	6	29	6	29	0.95
2	20	0.18	13	7.2	0.2	2	23	35	57	34	57	0.94
3	20	2.6e-06	0.00018	22.5	0.3	2	23	66	88	66	88	0.97
4	20	0.0015	0.1	13.8	0.2	2	23	96	118	95	118	0.94
5	20	4.4e-07	3e-05	24.9	2.1	1	23	125	148	125	148	0.97
6	20	1.5e-05	0.001	20.1	1.0	2	23	155	177	154	177	0.96
7	20	4.4e-06	0.0003	21.8	3.9	1	23	183	206	183	206	0.98
8	20	1.5	1.1e+02	4.3	0.5	3	23	216	237	214	237	0.75
9	20	0.0038	0.26	12.5	0.7	1	23	246	269	246	269	0.97
10	20	0.0016	0.11	13.7	0.3	1	23	296	319	296	319	0.98
11	20	0.09	6.2	8.2	1.8	2	21	327	346	326	347	0.94
12	20	0.0065	0.45	11.8	1.6	3	23	357	378	356	378	0.96
13	20	0.019	1.3	10.3	5.3	1	23	398	421	398	421	0.97
14	20	0.014	0.98	10.7	3.8	2	23	428	449	427	449	0.97
15	20	4.7e-05	0.0032	18.5	2.2	2	23	456	478	455	478	0.94
16	20	0.014	0.97	10.7	1.5	1	23	484	507	484	507	0.97
17	20	0.31	22	6.5	8.0	2	23	515	537	515	537	0.95
18	20	0.0019	0.13	13.5	0.3	1	23	544	567	544	567	0.96
19	20	0.00043	0.03	15.5	1.4	1	23	574	597	574	597	0.93
20	20	0.0013	0.09	14.0	2.8	3	23	609	630	608	630	0.93

Sequence Information

Coding Sequence: ATGGCAGAACCAAACTACATATGTGACTATTGCAATCGCAACTTCACAAGGAAGTATAACCTACAGACGCACATCGAAAACTGTCATCTAGATATGTCTTGCTACTGTGACATCTGCAATAGGGGATTAGGTAGCCCGAATGGTCTTGTACTCCACCTGAGTCGAGGCCACAATAGCTATGGCGAGCCCTTCCCAGAATGCGATATCTGTGGCAGAGTGTTCTCTAGACGCCAGAACATAATATCTCATATGAAAACCGTGCATTTATTAACAAATTCGGCCATATCTTGTGGTATTTGTGGTAAGATTTTGACAACTGGACGGAATATGAAAAGACATATGAGCTTAATGCATAATCCGGACATCCAATATTTCACTTGCCATGATTGCCAAAAAGTTTTCAAGCGTAAAGACGCTTTGATATCCCATATCCAGTCTAACCATAGAGCGTTGGGGTCTATAAAATGTGATCTGTGCACCAGAGTTTATAGGAACCTCAAGAATTTGAGGAGGCACATGGAAATGAGTCATGGAGATAAGGGAGAATACAGATGCGAAATTTGCCCAAAATTTTATACATCAAATCAAAGTTTAAGACGTCACATTAAAACTTGCCACTTGAATGAGGAAAACGAACAGTTGTCATGTGAAATTTGCTGTAAATTGGTATTTGGTAAAGACAATTTGGAAAGCCATATCGCTTCATACCATGGACAAGatacaattaaatatgaatttatgtGTGATTTTTGCAAAATGGGTTATGAGCAGGAGTATATGTTGAGACAGCATGTAAAAACTGTACACAGTTTTCAAGACTTCTACGAGTATTGTAAGAATTCGTTAATGAAATCTGAGGGTAGATTATatagaaagaaagatctatacCAATGCGAATTTTGTCCACAAGCGTATCTTAATGTTTACGAATTAAAAAACCACATGAGAGTAACGCATGAGAAAGATTATAGTCTCTCCACGTGCAACGTCTGTTTCCGAAAATTCTTTACTAAAGAAACTATAAAGAACCACAAAAGACTTTGCATACCTCCCAAAAATGTGAACAATTGCAGCCATTGTGACAAGCTATTCACTGACATATCCAGCCTTGAATTCCATATAAGGATATTCCATCCCCAAGCTCAAATAGCTGATTCCTTCACATCTAATTACGAAGATTCGGACCAATCGTACAAATGCATGCACTGCGAAAGGATATACAACAGCGATCGATCTCTAAAACATCATATCAAGTTGAAACATACTTCAAATGTTCCAGTCAAGTGCCAATCTTGCGACAAAATTTGCAAGAACAAATACTATTTGGCGTATCACAAGACTACCCACAATAACACATCCTGGTCCAAATGCGACTACTGCAACAAAGAATTCAAATCTAAACGAAACATTCGAAGACATATAGAGTATACGCATTTAGGTATGCAGAGATACAAGTGTATAGAATGTGAGACTCTGTTCAAAGAGAAACGGAGTTTGCGGAAACATGTCAGGGTTAAACATCCAAATTCCCCAGTATTCCCTCAATGCCACATATGCCACAAGCGTTTCGAGTCTGCGAAATCTTGCAAAACCCATTTAAAACTGCTACATTCCTTCAACATGAACACACATCCATGCGATTTATGCTCCGTATCTTTCGATACTTTGGAAGCATTAAACATACATTTATCTACAAAACATTTAGCAGCCGATGAAATATACAAATGCCAAGAGTGCAATCTAATCTTCAAAGGGCAGGACCAATTCACCAAACACtacgaagcattccattctacACTACCGACTACCAAAAGCATACCACGCTGCATAATCTGCTCAAAAGACTTTAGTTCGCGCAAAACTCTAAAACGGCACATAAAGAAGTTTCATGTCGAATTTAACGTAGATGAATTAGCGACTTACGGGTCAAGACGACGCGTGTTCAGCGTCGACTGTACAGAATGCATTAAAAGTTTCAACGAAGATTACTACTTCGAAACGTACCTCAAAGTGAAACATTTGAGGGAGTCTATAGTTTTCAAATGCGATTTCTGCAAAAGTACATACAATTCTTTGGAATTCGCCATTCAGAGGTACAAACAGAGCTTCGACGCTTCTCAGAGTAAACTGTACATGAGTGAATTATGTACTACACAAATGAGTGAAGACTCTTCTGAGGATGAAATGAAACCGAGTACTACGGTTAAAGTTGAACCAGCTGATTTGGATACTGTTGAGGTTATGGAACCGGAGAGCACGACTAATGATATCAAAATGGAACCTTTCGATGAATATGATATTGCGGGCTATAGCCTAAAAGAGGAGACCTTTTAA
Protein Sequence: MAEPNYICDYCNRNFTRKYNLQTHIENCHLDMSCYCDICNRGLGSPNGLVLHLSRGHNSYGEPFPECDICGRVFSRRQNIISHMKTVHLLTNSAISCGICGKILTTGRNMKRHMSLMHNPDIQYFTCHDCQKVFKRKDALISHIQSNHRALGSIKCDLCTRVYRNLKNLRRHMEMSHGDKGEYRCEICPKFYTSNQSLRRHIKTCHLNEENEQLSCEICCKLVFGKDNLESHIASYHGQDTIKYEFMCDFCKMGYEQEYMLRQHVKTVHSFQDFYEYCKNSLMKSEGRLYRKKDLYQCEFCPQAYLNVYELKNHMRVTHEKDYSLSTCNVCFRKFFTKETIKNHKRLCIPPKNVNNCSHCDKLFTDISSLEFHIRIFHPQAQIADSFTSNYEDSDQSYKCMHCERIYNSDRSLKHHIKLKHTSNVPVKCQSCDKICKNKYYLAYHKTTHNNTSWSKCDYCNKEFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRVKHPNSPVFPQCHICHKRFESAKSCKTHLKLLHSFNMNTHPCDLCSVSFDTLEALNIHLSTKHLAADEIYKCQECNLIFKGQDQFTKHYEAFHSTLPTTKSIPRCIICSKDFSSRKTLKRHIKKFHVEFNVDELATYGSRRRVFSVDCTECIKSFNEDYYFETYLKVKHLRESIVFKCDFCKSTYNSLEFAIQRYKQSFDASQSKLYMSELCTTQMSEDSSEDEMKPSTTVKVEPADLDTVEVMEPESTTNDIKMEPFDEYDIAGYSLKEETF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021501;
90% Identity: iTF_01021501;
80% Identity: iTF_01021501;