Basic Information

Gene Symbol
Dnajc1
Assembly
GCA_034621355.1
Location
CM067885.1:17374444-17379726[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.2e-07 0.00097 19.9 0.0 2 35 292 328 291 333 0.85
2 2 1.4e-10 1.9e-07 31.8 0.1 2 43 373 419 372 421 0.87

Sequence Information

Coding Sequence
ATGCGGTGTGTTATTTTATTGCTCTGCGCTACAATATTGGGAGTTGCGGCTTGGGATGATGACGATTTGGAAGTATTCGACGCGGTGGATGAAGTGAACCAAAATTTCTACGAATTGTTAGGAGTTACACAGGATGCATCACAATCAGAAATAAAGTCTGCCTTCAAGAAACTGACTCTAAAGCTGCATCCGGATAAGAATGACGCCCCCGATGCTGATGTACAGTTTAGGAACTTAGTCTCTGTTCACAATATACTTAAAGATCCAGGGAAAAGAGAAAAGTACAATGAAGTGCTCAAGAATGGTCTTCCAAACTGGCGCTCAGCCGTTTATTATTACCGACACGTGAGGAAGATGGGTCTAGCTGAAGGCTCCATCATCCTATTCATAATCATCACATTTGGCCAGTACGCTGTCGGATGGGCAGCATATATAGAGAAACGATACACTGCTGAACAAATATTGAACAGTAGAGGCAAGAAACATCTTAAAAAGGGCTTTGACACTGGCATATCAGAAATATTGGACCAACTACCGAAACCCAGTATTAAAGATACACTGCCCTTTCAAATACCTCGTGCGATATGGTGGACGATTACTGGCATCCCTCTCACTATTATAGAATTAAAGAGGAGAAGAAAAGAGATGCAAGAGGAAgagagaagaagaaagaaaagagaagaagaagaaaaggcTAAAGCAGAACGCGAAGCGGCGCTTGCGGCTGAGAATAAACAGTCTGGGGCTGCGAGACGGCGGCGCGCCTTCGTGCCTCAGGAGCGGGAGTGTCTGCTGGACCCCGCCGCCGAGCCAACCGACGACGACGCGCCCGTCGTGCGCCAAGTCAAGCCCGCCGCCCCAGTGATTTCGGGCGGGCTCTGGACAGACGACGACCTGGCGGAGCTGGTGCGGCTGGTGAAGAAGTACCCGCCGGGCGCGGCCGAGCGCTGGGAGCGCATCGCCGACGCCATGGGCCGCAGCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGAGAACTGCTATAAGATCCCCGGACAGGAGGCGGTGGAGGAGACCCCGCCTGAACCACCCAAAAAAGTGAAGACGCGTAAGGTGGAGGAGAGCCACGGCGGCAACTGGtcgcagcagcagcagcgcgcGCTGGAGGCGGCGCTCGCGCAGCATCCCAAGGGAGGTGCCGGGGATCGCTGGCAGAAGATCGCCAGCCAAGTGCCCGGGAAGAGCAAAGAGGAATGCATGCAGAGATGTAAATACTTGTCGGAGTCGCTGAGAAAACAGAAGCAGAAAGAAGAAGAGGAACAGAGAGAACAGGAGCTACAGAAAGAGAGTACAGAAGCAGTCAGCgagtga
Protein Sequence
MRCVILLLCATILGVAAWDDDDLEVFDAVDEVNQNFYELLGVTQDASQSEIKSAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYIEKRYTAEQILNSRGKKHLKKGFDTGISEILDQLPKPSIKDTLPFQIPRAIWWTITGIPLTIIELKRRRKEMQEEERRRKKREEEEKAKAEREAALAAENKQSGAARRRRAFVPQERECLLDPAAEPTDDDAPVVRQVKPAAPVISGGLWTDDDLAELVRLVKKYPPGAAERWERIADAMGRSVPEVTHMAAKLKENCYKIPGQEAVEETPPEPPKKVKTRKVEESHGGNWSQQQQRALEAALAQHPKGGAGDRWQKIASQVPGKSKEECMQRCKYLSESLRKQKQKEEEEQREQELQKESTEAVSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00801804;
90% Identity
iTF_00954410;
80% Identity
-