Basic Information

Gene Symbol
-
Assembly
GCA_034621355.1
Location
CM067904.1:11264227-11266401[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.33 6.6e+02 1.5 0.0 52 86 101 134 87 135 0.79
2 4 0.0073 14 6.8 0.1 32 85 175 227 150 229 0.70
3 4 0.0064 13 7.0 0.0 48 83 282 316 261 318 0.84
4 4 0.013 26 6.0 0.1 49 83 383 416 340 419 0.81

Sequence Information

Coding Sequence
ATGGAAATTAATAATCCTCAAAGTTATTGGTTTGTCGTAAGAGAAGATCAGAGCAATGTAATATTTAGCAGCAACAATTTTACTATACAAGCACCGCAAATTGCAGGACAAGATGGCAGATACATTGTAGATAGCTCAGTAGATAACAGGCAGTATGTCGATAATATCCACACAGATAATATAGCAGAAGCTCAAGATTCTGCCAAAGAAACCAAAGACTGTAACATATgggatagaaataaaataaaacttctactGTCTCTTTGCTTAgagaatagatttaaaaatgcaaacAAAGACAAAATCGATTGGGATGAAATATCCATACTATTGGGGACTACACCAGAAGAATGTGACAAGAAGTATAGAAATCTCCGCAGAACATACATAAGACTTCTTAAGAAGAATAGAGCGGGGAAAGATATCAAATGGGTGCACTATAGCATGTGCGATGAAGTCTTTAAAGATTGTAAATCAATGTCTGTGACTTTGCTACCCCCTTGGGAAGACAGCAAAGTGAGGAAACTACTCAACTTGTATATTGAAAACCTTAACAAGTTTCGCAGTTCAGAGCATCTCCAAAAAGATATATGGAAGGACATAGCTTCTCAGTTAAACACTACAGAGTATAATTGCTATCACAAGTTCAAGAACATGAAGAGAACTTACTTAAACTGGATTGAAAGGAGCCAAGAAACTGGAAAGTTGAGAAAGTGGCCATACCATCAATACTTTGAAAGGATCTATTACAATTACAGTCCAGATTTGGGACCTTGGAATAGAAATAAAGTCAGACAACTAATAAATGCATATTCTGATATTgcacataaatttaaaaatccaaaactacaaaaaaaggAACTGTGGAGGGAGATTGGTAGAAAAGTTGGTGAATCACCTAGTAATTGTGATAGGAAGTTTAGGAATCTAAAACAGACTTACTTAAGATTAAAAATGAGAGCTGACTCTGGGAGATTGATGACTAAATGGAGATACTTTAAAGATTTTGTTACTATATTTGAGAATGAATTGTATGATGTGATAGAGCAGGGACAGGAAATAACCTACAAACCTTTGGAACACGATTATATAAAGCAGCTATTGACATTCTATATAGAGAATAAGCAAAAATTTAATGACCCACttgtaaaaaagaaacatttgtGGAGGCAAATAGGCCCACGCCTGGGACTGACTGCGGAAGAGTGTGACAAAAAGTTCCGTAACATGAAACAAACATATATAAGATTAGCAGAGAAGAAAAGAGACACAGGAAAAGATAACACCTGGCCATATTATTCATACTTTGAAGAAATCTATAATGGgtctacaatttttaaattgagaGAATGTACTCACAAATGCAGCATTGACAATTCAACTATAAAGGAAATAAGAAACCTAGTTAACAATCATGAGACCAAGGAAATGGATAAGTTTGAGAAACTTGTCTCAGCCATAGAAGattcaaataaaattcaaagGGAAAGAAATAGAATCCTTCAAGCTCTTTTGaatagataa
Protein Sequence
MEINNPQSYWFVVREDQSNVIFSSNNFTIQAPQIAGQDGRYIVDSSVDNRQYVDNIHTDNIAEAQDSAKETKDCNIWDRNKIKLLLSLCLENRFKNANKDKIDWDEISILLGTTPEECDKKYRNLRRTYIRLLKKNRAGKDIKWVHYSMCDEVFKDCKSMSVTLLPPWEDSKVRKLLNLYIENLNKFRSSEHLQKDIWKDIASQLNTTEYNCYHKFKNMKRTYLNWIERSQETGKLRKWPYHQYFERIYYNYSPDLGPWNRNKVRQLINAYSDIAHKFKNPKLQKKELWREIGRKVGESPSNCDRKFRNLKQTYLRLKMRADSGRLMTKWRYFKDFVTIFENELYDVIEQGQEITYKPLEHDYIKQLLTFYIENKQKFNDPLVKKKHLWRQIGPRLGLTAEECDKKFRNMKQTYIRLAEKKRDTGKDNTWPYYSYFEEIYNGSTIFKLRECTHKCSIDNSTIKEIRNLVNNHETKEMDKFEKLVSAIEDSNKIQRERNRILQALLNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091480;
90% Identity
-
80% Identity
-