Mmin023425.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- jarid2b
- Assembly
- GCA_034621355.1
- Location
- CM067908.1:16964763-16980154[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-20 2.4e-17 63.8 0.0 8 89 258 336 254 336 0.91 2 2 2.7 5.4e+03 -1.4 0.0 40 81 407 444 400 450 0.69
Sequence Information
- Coding Sequence
- ATGATAAGTGTCACACACCCAATATGTGACTTAGATGATGTGGTTGAGATACCGGCCACCACGCCACCTTTAAGCCCTATGTATGATGAGAATATTCCAAGTACAAGCTCGAACTATTTAGTATCATTACCGCCTTCGGCTCCGGCACTTACATTCAATATTAATGAGCCGATACCCTCGACCAGTACAAACATTCCACCATGGTTGAGACAAAGTGTAGCACAGACAGTAGCAGAAGAGCCATTTACACTATATTTATCCAGAACAGAGTCAGAAGAGcctttttcacaaaatttaacCAGACCAGAGTCACAAGAGCCTTTTGCACCAAATTTAACCAGACCAGAGTCAGATGAGCCTTTTGCACCAAATTTAACCAGATCAGAGTCAAAAGAGCCTTTTGCACCAAATTTAACCAGACCAGAGTCAGAAGAGCCTTTTTCACCAGATTTAACCAGACCAGAGTCGGAAACCCAGACTGATACACCCAGTGTCGATAGAAGTCAAGCTTCATCACCTATGTTCAATTTGTACTCAACAATGACCAACAGGGTGCCAGTATATTACCCCACGTTAGATGAATTCAAGGATCCGTtggaattttataataaagtagcACCTGTAGCTTCCAAATATGGATTCTGTAAGGTGGTTCCACCAAAAGCATTCCAACCTAAATGCCATTTGGAGGGCTTGGAGCGGCTTGAAGTATGGAACCAATATGTACATCGGTTCTATCAGAGATTGGGAGCAGGCACCAGGGACTTGTGCGCCATCAGAACTCACTTGGCCTCTCATGGAATTCACGCCAAGACACCACCATTAATTGATGGCCTGGAAGTAGATCTTCCAAAAATGTTCAAGGTCGTGCAGAAGTATGGGGGATTTAATGAAGTCACGCGaaaaaataaatggaataagaTAGCGGAAGCGATGAATTTCTCTAAATTAACAAATCCAGAAATTAAACTGGACCGCATTTACCTTAAATACATCTTACCATATGACATCCTAAGAAATGACGAAAGAATAActctcaataaaaatatagaggCTAGATGGCTTAAGCAGAGCCAGAAACTATATGCAAGAGCTCGAAATCCATTGCATccaaaaaaagtttttagaGGAGAGTCGGATTCATCTTCAGACGAAGAGAGTATTACTGAAGTCATCACGTACCACATTAGAAACATCCTTGTAGATGTGGAAGATTGTGTTAAGTCTGGCCGCTACATGCAGTTATCAGCTTTTAAAAAGaTCAATGACAATGCAGAGCGTATGTATTTCCCAGACAAGGAGGTATATGAAGacttaattgaaaatttttactgGAATGCTGTGCTTAATGCCACAGATCACATAGTTGTGCATACTGCGTCAGTTGATGCTAGCGAAAGAGATATTGGATTTTCCACTCATAGCGGTACTACGGCCGATCACCCTTGGAATCTAAAGAACGTCCGGCACAACCGCGCGAATATTCTACGCTCATTAGGCCCCACTGTACCTGTCACTGCCCCAATTGTGCACTTCGGAATGATATTTTCTACGAATTGCTGGCATAGGGATCCGCATGGTTTACCTTGGATAGAGTACTTGCATACTGGGAAAAGTAAAATATGGTATGGCATACCTGAACATCAAAGTGAGCAATTCCGCAAAGCCGTAGAAAAAATATGTCCTCtatatgtacaaaataaatcGGTATGGCTGCCATCGGACATCCTGATGATACCACCGCAGTTGCTATCCGATCAGGGAATTCAACTCTATCGAGAAATACAAAAGCCTGGGGAATATATGTTTATCTTCCCCAAAGCGTATACATCTTCGATATGCACAGGGTTCTCAATATCTGAGAGTGTATATTTTGCTGTTGACACATGGCCTACAATAATGACTAAAATATTCAAGGAGTTAAGGGAGAGTTGTGAACCTATGATATTCTCACCGGAACATCTTTTAATTGCAATGGCCCGCGACAACCGCGTTACAGTTCCGCAACTCAAGCAGATCTACCCTGAAATTGTTGGTATGGTAGACGAAGAACTGGCCATTCGATCGGCCCTACTGGATCTTGGAATAGtggaACATTTTCAAGGTCGCAAGGATGTGTCTTGGAAGAGCAGCAGAGAGGAGGAATGTGATGTTTGTCGTCGCCCACTGTACTTATCAAAGGTAAGGTAA
- Protein Sequence
- MISVTHPICDLDDVVEIPATTPPLSPMYDENIPSTSSNYLVSLPPSAPALTFNINEPIPSTSTNIPPWLRQSVAQTVAEEPFTLYLSRTESEEPFSQNLTRPESQEPFAPNLTRPESDEPFAPNLTRSESKEPFAPNLTRPESEEPFSPDLTRPESETQTDTPSVDRSQASSPMFNLYSTMTNRVPVYYPTLDEFKDPLEFYNKVAPVASKYGFCKVVPPKAFQPKCHLEGLERLEVWNQYVHRFYQRLGAGTRDLCAIRTHLASHGIHAKTPPLIDGLEVDLPKMFKVVQKYGGFNEVTRKNKWNKIAEAMNFSKLTNPEIKLDRIYLKYILPYDILRNDERITLNKNIEARWLKQSQKLYARARNPLHPKKVFRGESDSSSDEESITEVITYHIRNILVDVEDCVKSGRYMQLSAFKKINDNAERMYFPDKEVYEDLIENFYWNAVLNATDHIVVHTASVDASERDIGFSTHSGTTADHPWNLKNVRHNRANILRSLGPTVPVTAPIVHFGMIFSTNCWHRDPHGLPWIEYLHTGKSKIWYGIPEHQSEQFRKAVEKICPLYVQNKSVWLPSDILMIPPQLLSDQGIQLYREIQKPGEYMFIFPKAYTSSICTGFSISESVYFAVDTWPTIMTKIFKELRESCEPMIFSPEHLLIAMARDNRVTVPQLKQIYPEIVGMVDEELAIRSALLDLGIVEHFQGRKDVSWKSSREEECDVCRRPLYLSKVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -