Mnit006164.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- GATA-B
- Assembly
- GCA_949126915.1
- Location
- OX421417.1:21135516-21137570[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-17 1e-13 51.5 4.6 1 34 11 43 11 45 0.97 2 2 5.2e-19 2.5e-15 56.6 7.1 1 34 64 96 64 98 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTCTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACCGTGCACACGCCGCTGTGGCGCCGCGACTCCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACCAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCCGGCGGGCAGCAAGCGGCCGGGCACGCTGTGCACGAACTGCAAGACGACGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAGCATCAACCGCCCGCTCGCCATGAAGAAGGACGCCATACAGACGAGAAAGCGAAAACCAAAGAACGGGATAAAGGCTGAAAGAAATTTGAAAACAGCCGTCCAGCGCACTCTATCTTCGGGAGTTAAAATAGAAAACTTATTAGACAGCGGCATGTGCGGCGTGCGGCAGTCCAGCTCGGCCGTGGGAGGACTGGCCAGCTACTACGCGTCCCACATCAAGCTGGAGGAGGCTGCGGGGGGCGCGGGGGGGGCGGGCCAGGCTGCGGGGGGCGCGGGGGGGCGCGCGTTCGACGACGCGTACCGGCGCGACGAGCGCGTGGAGCGGCCCACGGTGGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGTVHTPLWRRDSTGHYLCNACGLYTKMNGMNRPLKQPRRPAGSKRPGTLCTNCKTTTTSLWRRNAHGETVCNACGLYYKLHSINRPLAMKKDAIQTRKRKPKNGIKAERNLKTAVQRTLSSGVKIENLLDSGMCGVRQSSSAVGGLASYYASHIKLEEAAGGAGGAGQAAGGAGGRAFDDAYRRDERVERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -