Mnit003081.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- -
- Assembly
- GCA_949126915.1
- Location
- OX421415.1:7200713-7207799[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.17 15 7.1 2.5 1 23 83 106 83 106 0.95 2 20 5.2 4.7e+02 2.4 4.6 1 23 184 206 184 206 0.97 3 20 0.0014 0.13 13.7 0.7 2 23 212 233 211 233 0.97 4 20 5.2 4.7e+02 2.4 2.4 1 23 239 261 239 262 0.94 5 20 0.19 17 6.9 3.4 2 22 499 519 498 519 0.95 6 20 3.8 3.4e+02 2.9 1.0 1 23 614 636 614 636 0.82 7 20 0.33 30 6.2 0.5 2 23 764 785 763 785 0.96 8 20 0.013 1.2 10.6 0.6 2 23 863 884 862 884 0.96 9 20 0.039 3.5 9.1 1.7 1 23 892 914 892 914 0.97 10 20 0.13 12 7.4 3.4 1 23 947 969 947 969 0.95 11 20 0.00026 0.024 15.9 4.0 1 23 977 999 977 999 0.99 12 20 1.1 1e+02 4.5 1.6 1 23 1078 1100 1078 1100 0.95 13 20 2.3 2.1e+02 3.5 1.7 1 19 1157 1175 1157 1179 0.92 14 20 0.4 36 5.9 0.4 2 23 1186 1207 1185 1207 0.96 15 20 0.028 2.5 9.6 1.1 1 23 1276 1298 1276 1298 0.93 16 20 0.014 1.3 10.5 1.1 1 23 1304 1326 1304 1326 0.96 17 20 0.0074 0.66 11.4 2.6 1 23 1415 1437 1415 1437 0.97 18 20 0.00018 0.017 16.4 1.4 1 23 1443 1465 1443 1465 0.99 19 20 0.35 31 6.1 2.0 1 23 1554 1576 1554 1576 0.96 20 20 0.017 1.5 10.3 3.9 1 23 1587 1609 1587 1609 0.98
Sequence Information
- Coding Sequence
- ATGCTTCAGCAGATGTTCTCGCCGCACTATCGAGTCGGCGAGGTCGTGTCTTTCGTGCGCCCCTTCGAAGGCCGGGTTTGCGGCGACGCGTCGTCTGAGGCTTCCTCGGATGCCGCTGACGAATCGGACTTACCGCAGTGCAAAAACAGAAGGAACTACAGCTGTATTAAGTGCAAGTTTTATACGCAAAATCCGCGCGCGTATCTCGTGCACGCCCGAGACGTTCACtttgaaaagtttaaaatacaTGACTGTCCACACTGTATCTACGCCTCGAAGACCCTTCAGAAACTTAATAGGCATATAAAAATGGTGCATACCGCTCCACCACCGGTGACCGAAAAAGTAGAGCAGGATAAACCGGTCCCCATCACAGAGACTACAGAACCTATAGAAGAAATGGAAGATATGCTCGAAGAAGTGGAGGAATGCGAAGATATCGAGATGGATATTGATGACTGTAACGAGGAGTCTTTCGAGCGCAACACCGAAGCCGGTGCTGACAGTGAAGCGGCCTTAGCGGAAGCTCTGAAGAATAAAGGAAAATACTTCTCCTGCAGCAAATGCAACTACGTCACTCATATAAAAGCCAGATTCACAAAACATGTGAAGTATCACTCGATGCCAATGATAAAGTGCACTATATGCGATTTTCGATCACCCTACAAGTGGAATCTGGACCGTCACATGAAGAACCATGGCGGGAACGGAAACTTCAAGTGCTTCATGTGCAATTTTACGGCGGACATCAAGCAAAGTTTGACCCTTCACGAGATGAATCATCACACGCCGCCGGTGGGGAACGTGACAGCGTGCCGCCGCCGCAACCGGGTGGGCGCCAGTGACATGGCGGAGGTGGACGCGGACGCGCTCATCCTAAAGGAGGAGGAAGGGAGCGCCGACTCGCGCTCTTCGTGTTCGGATATGGGAAATCCTGAGAAAGACATCGTAAGCTGTCACAGTGATTCAAACGACGAAAATTCTACAGATGCTAGATTAAAAAACGAGTCTAGCCCGGCATTTGAGGGCGTCAGTCACGATTCACCCAATACTGCAACAGACGACTCGAAGTCGCAAAAACAAAACAGGAAAATTCCTAGACCGCCCCCACCGCTAATACCATTACACGCGTCAACgcctaatcaaaataaaacatgtacTGGAGAACCGCCAGCAAAAAAACTCAAGGAAAATCCAAGCTTGGAACCTGACGCCTTCatcaaaacaaataacattGAAAACATGCCTATGGATATCAGTATAACGCCAGTAAATAACATTCCTCCAAATGTAGCTCGTAAGAAGAATGAGTCATTCTTTGATAAACTAAAAGAAAGGCTGCTGACGGAGACTGGCGAGGAAGGCTCCCTAATTTGTAAGAACTGTGGGTTCGAAAGCAAATGTTTATCAGAACATTCTGTACATGAAAAGAACTGCTCTCCACAATTGAGTAGAACGTCAACCAACACGTTGCTTCCAAGTATGAGCTCAACACGTTGCCAAAACTGCAGACACAGATGCAAATCTAGTGCAGATCTATACGTGCACATGCAGACGTGTAAAAAAAACGATAAGGGTGGTGACGCAGTCTTAGAAGCTAACAATAAAGATGGCGTAAATTCAAAGGAAGAAAGGGAATCTGAACCACATCCGATGGAAAATGTAGTATTCGTTTGGAATAATATTAGTCAAGGCGGCAACAAGTACGAAACACCACTAGACATTAATATCAACGATGATTCGACTCTTCCTGAAATGAATAAAGGTTTCGACCCAGATTCAGTCGATGATAATGAAGGGATGAATTTGTCTCCGAGCCAAGCTGCAgggaaaaaagtatttaaatgtcCTCATTGTCCTTTCTGGGCGTCTACGGCGTCTAGATTCCACGTTCATATAGTTGGGCATTTAAACAAGAAACCTTTTGAATGTTCCCTTTGTAAATACAAATCTAACTGGCGTTGGGATATCACTAAACATATTAAGCTGAAGTCAGCAAGAGATCCGGAGCACAATAATGCAAAAGTTCTAATGACTGACGAGACTGGCCGTCGTAATTATagcaaatacaataaatttattgccATATCAATTTTAAACGAAAATGGTCAGAATGTATTTCATTATCTAGATGCTTCTACAGATCCTTCAATGGATATTGAAGATTCCTTGAACGATTTGAATGACGGCCAGGTACTTGATTTTCCCCTTAACTTACAAACTTATAACATTGACCAGAAATATGACCCTGATCAAATTGATTCAAAGAAGCCCAAGAAAACCTTATGGAAATGTAAAAAATGCAATTACAGAGACTCATCCAGGGAGGCGCTGTTGGAGCACGTTCGTGAACATTCCAAAGTAGAGGGTAATAATCCTGATGATACAAAACCAAATAAGAAGACAGAAAATCCACCCGACCCGGCAGATTTAGCATATCGCTGCGGTCATTGCAATCAATTATCTAACTGGAAACACGTGATACAGagACACTGTCGCCTAAAGCACGAGGgtattattaaagtaataacAACAGTGAAGCCCAAACAAGATCTAACTGCGGCTTTGAACGAGATTCACGGCGACTCTTGCAACAAATGTCCTTACAAAACTAGTGACAAGAAACTAATGTTGGCGCATATTCAACAACACCAGCCATCTCCGTTGTCCATATTTAAATGCTTCTTCTGTCCTTACTTTGTGAAAGATGAGCATGAATTGATACAACACCTGTTGTTACACGGAGTGTCCGAACCAGAAGAATATATTGCGAAAGCTATGGGACATAAATCCCCCTTATCGGATTTAAATATAGCTAACACATCGTCAACAAAGCGACATAAATGCACGGAATGTCCATATGAAACCAACAGTAAATCACAGTACATGTACCATGAACAATTCCATAGACTCCCTGCAGATACGCCTTACAAATGCCCCGAGTGCAATTATAGCGTCTCCAAAAGACATTTGCTGCATCAGCATCTCCGAGTACACGGGATAATAAGCAAAAAGAACGAAAGTGAAGCAGATTTAGAATCCAAACCAGATGAGTTAATTGAATTCTCTATTAATCTTGACGAAATTCCTTTCGTTTGGGTATCAGCGAAAAATGAGTTTCATAAGATGTATAAATGTCGTTATTGTTCTTATGTTAACTCGCAAAAATGTAAAATACCAAACCATGAAAAAATTCACTTTATTGTTTTCGATAACACTGATATCACAATATACAAATGTTTGGAGTGTAAATTCACTTGTGATAGCCCTATGAGACTCGCAGAGCATTCTAAAGGCCACGGAGAAATATATGGCAGAATATATTGCCCGGTAGAACTGGATATTCCTGATGAGGAGCAAATCTCTAAATTGCGTAAAGTCATCGAAACTGAAAGAAGCAATAATCCAGAGGAAGGATTACTTATAGACGAGAAAGTGCTAActgaaaacaatgaaataaaaattttatatttttgtcataTGTGTCCTGCTAGATATTTCACTGATGAAGAGCTTAAAATTCACGATAAATTCCATGACTTATCATTTGCAAACAAATGTAATCGATGTGATTTTTCAGTTCACGACGAGAATGAATTAATTGCACACGCTTCTGTTCACTCAGACGAATATCatactaaaacaaaaatgctTAAGTTTATGCATAATTCATATAACGCACACAAGCAGCCTAATCTTGACCTCGTTCATTGTCCAGTCACATCAGACATAACGTGGGTTGTATCTAAGCCAAGAAAGAACTATGATTTCGAAATACCTTATGTCCATAAAAAATCACACGAAGGTAAACAGGGCCCGAAGCAATACTTTTGTAAGGAATGTCCagcaaaattctttaaaaattctGCTCTTAACTATCATTTTGCACTTCACGGTGGAGAAGGAGAACACAAATGCAAAAAATGCAGTTATGCTGTAAAAAATGTGGGGAATTTGGCCAAGCACGAGTTGCTGCATGAACAGGTGGGAAAACCAACATGTGACTACGAATCTGGTGAAGATAtggattataaaaatatacctctATCAGGCACCGATCTCTTTCAGAGAAAAACCGAAGCTCAAAAGAGAGTACTCAATGATAAAGATAAGTTGGTAAAACCAAATGATCATTTTCCACCAGTGTTACAAGCCGACCCTCAGTTTGGTTATTTGATGCATGGTAACCCGGAATTTATATACCCAACTTATTTGAAAAACGGTCGGCAGAAGGAAAAACGATACAAATGCCATAAATGTCCATCTGCCTTTGAAAAAAGGgaacaatataaaatacatttatcacTACATGGTTCAAAACAAAGATATAAATGTGAACTTTGTGATTATTCAGTCAAGTATTATGCCAATTACGTTCAACATATGAGAAAACATCAAATGAATGATGAAGCACTGGCTGAAAGGAAGAAAAATGATAGTGGTATAGTCGAGTCCGAAATTGACATAGCCAAACTGGAAGACCACGATAACATAAAACTAGCTATAAAAACAATGCCCAAAGGAGCGCCTAAAAGCGATTTCCAACAGTTTTCTGTAAGCGACCAACAGACACTACGAATTCTACAACGAAGACGGTCTATAGACAACAACAAAGAGCAATCGCCTTCAGATGCTTCTCCTGCCAAGGAAAGAAAACTACATATGTGTCTGCTGTGTCCCTACACAAATCAGCGTCAAGACGCGTTAAATAATCATTACCGAAGACACGAAGAACCTGACGATTTAAATGGCGGAAGTCATAAATGCTCCTTCTGTGATTTGGTAGTGGTGCAGTCACATTTTCTAAGGGATCATTTAAAAACCCACTTTAACCCGCAAAAAAACACTACACCTGACTGTTTCGTAGCCAATGAAGACGTGACCTTCACAATTACTAAACTAGATGATGAAAGTGTCTCTACTGATCTCAAATTAGATATTCAAAGCAGCAATTTAAAGTGCAATGAAGACAAAATTTATGTAAAGATTCAAACGGGAGAACTCATAGATGTTGTGTAA
- Protein Sequence
- MLQQMFSPHYRVGEVVSFVRPFEGRVCGDASSEASSDAADESDLPQCKNRRNYSCIKCKFYTQNPRAYLVHARDVHFEKFKIHDCPHCIYASKTLQKLNRHIKMVHTAPPPVTEKVEQDKPVPITETTEPIEEMEDMLEEVEECEDIEMDIDDCNEESFERNTEAGADSEAALAEALKNKGKYFSCSKCNYVTHIKARFTKHVKYHSMPMIKCTICDFRSPYKWNLDRHMKNHGGNGNFKCFMCNFTADIKQSLTLHEMNHHTPPVGNVTACRRRNRVGASDMAEVDADALILKEEEGSADSRSSCSDMGNPEKDIVSCHSDSNDENSTDARLKNESSPAFEGVSHDSPNTATDDSKSQKQNRKIPRPPPPLIPLHASTPNQNKTCTGEPPAKKLKENPSLEPDAFIKTNNIENMPMDISITPVNNIPPNVARKKNESFFDKLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSPQLSRTSTNTLLPSMSSTRCQNCRHRCKSSADLYVHMQTCKKNDKGGDAVLEANNKDGVNSKEERESEPHPMENVVFVWNNISQGGNKYETPLDININDDSTLPEMNKGFDPDSVDDNEGMNLSPSQAAGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNNAKVLMTDETGRRNYSKYNKFIAISILNENGQNVFHYLDASTDPSMDIEDSLNDLNDGQVLDFPLNLQTYNIDQKYDPDQIDSKKPKKTLWKCKKCNYRDSSREALLEHVREHSKVEGNNPDDTKPNKKTENPPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKQDLTAALNEIHGDSCNKCPYKTSDKKLMLAHIQQHQPSPLSIFKCFFCPYFVKDEHELIQHLLLHGVSEPEEYIAKAMGHKSPLSDLNIANTSSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIISKKNESEADLESKPDELIEFSINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHFIVFDNTDITIYKCLECKFTCDSPMRLAEHSKGHGEIYGRIYCPVELDIPDEEQISKLRKVIETERSNNPEEGLLIDEKVLTENNEIKILYFCHMCPARYFTDEELKIHDKFHDLSFANKCNRCDFSVHDENELIAHASVHSDEYHTKTKMLKFMHNSYNAHKQPNLDLVHCPVTSDITWVVSKPRKNYDFEIPYVHKKSHEGKQGPKQYFCKECPAKFFKNSALNYHFALHGGEGEHKCKKCSYAVKNVGNLAKHELLHEQVGKPTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEALAERKKNDSGIVESEIDIAKLEDHDNIKLAIKTMPKGAPKSDFQQFSVSDQQTLRILQRRRSIDNNKEQSPSDASPAKERKLHMCLLCPYTNQRQDALNNHYRRHEEPDDLNGGSHKCSFCDLVVVQSHFLRDHLKTHFNPQKNTTPDCFVANEDVTFTITKLDDESVSTDLKLDIQSSNLKCNEDKIYVKIQTGELIDVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -