Basic Information

Insect: Musotima nitidalis
Gene Symbol: -
Assembly: GCA_949126915.1
Location: OX421417.1:16936845-16945594[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 6.6e-07 5.9e-05 24.1 0.6 1 23 200 222 200 222 0.99

2 30 0.00036 0.032 15.5 0.9 2 20 253 271 252 273 0.93

3 30 1.7e-05 0.0015 19.7 0.5 3 23 314 335 312 335 0.96

4 30 7.4 6.6e+02 1.9 0.2 2 14 355 367 354 375 0.81

5 30 0.0061 0.54 11.7 1.2 1 23 385 408 385 408 0.97

6 30 0.07 6.3 8.3 0.0 1 23 427 449 427 449 0.96

7 30 4.1e-05 0.0037 18.5 2.4 2 23 502 523 501 523 0.97

8 30 0.00018 0.016 16.5 2.1 2 23 565 587 565 587 0.97

9 30 0.00059 0.053 14.8 0.9 1 23 637 660 637 660 0.95

10 30 0.032 2.8 9.4 0.1 1 23 712 734 712 734 0.97

11 30 0.011 0.96 10.9 5.5 2 23 746 767 745 767 0.96

12 30 0.57 51 5.4 1.6 2 23 779 800 778 800 0.95

13 30 0.01 0.92 10.9 2.2 1 23 810 832 810 832 0.98

14 30 0.95 86 4.7 7.3 1 23 861 883 861 883 0.96

15 30 0.0002 0.018 16.3 2.3 1 23 894 916 894 916 0.97

16 30 0.00012 0.01 17.1 0.8 1 23 924 946 924 946 0.97

17 30 0.0012 0.11 13.8 0.3 2 23 966 988 965 988 0.97

18 30 1.1 1e+02 4.5 0.3 1 23 1006 1028 1006 1028 0.90

19 30 0.39 35 6.0 3.0 1 23 1035 1057 1035 1057 0.96

20 30 0.02 1.8 10.0 2.5 2 23 1068 1090 1067 1090 0.95

21 30 0.0042 0.37 12.2 0.2 1 23 1112 1134 1112 1134 0.97

22 30 0.83 74 4.9 0.3 2 20 1138 1156 1137 1157 0.91

23 30 0.027 2.4 9.6 0.2 2 23 1215 1236 1214 1236 0.92

24 30 0.68 61 5.2 4.7 3 23 1244 1264 1242 1264 0.96

25 30 0.0011 0.096 14.0 0.9 1 23 1274 1297 1274 1297 0.96

26 30 0.31 27 6.3 2.8 2 23 1314 1332 1314 1332 0.88

27 30 0.47 42 5.7 2.3 2 23 1405 1426 1404 1426 0.94

28 30 0.0034 0.3 12.4 0.6 2 23 1437 1459 1436 1459 0.96

29 30 5.2 4.6e+02 2.4 0.7 2 23 1475 1493 1475 1493 0.77

30 30 0.65 58 5.3 3.1 2 20 1497 1515 1496 1517 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	6.6e-07	5.9e-05	24.1	0.6	1	23	200	222	200	222	0.99
2	30	0.00036	0.032	15.5	0.9	2	20	253	271	252	273	0.93
3	30	1.7e-05	0.0015	19.7	0.5	3	23	314	335	312	335	0.96
4	30	7.4	6.6e+02	1.9	0.2	2	14	355	367	354	375	0.81
5	30	0.0061	0.54	11.7	1.2	1	23	385	408	385	408	0.97
6	30	0.07	6.3	8.3	0.0	1	23	427	449	427	449	0.96
7	30	4.1e-05	0.0037	18.5	2.4	2	23	502	523	501	523	0.97
8	30	0.00018	0.016	16.5	2.1	2	23	565	587	565	587	0.97
9	30	0.00059	0.053	14.8	0.9	1	23	637	660	637	660	0.95
10	30	0.032	2.8	9.4	0.1	1	23	712	734	712	734	0.97
11	30	0.011	0.96	10.9	5.5	2	23	746	767	745	767	0.96
12	30	0.57	51	5.4	1.6	2	23	779	800	778	800	0.95
13	30	0.01	0.92	10.9	2.2	1	23	810	832	810	832	0.98
14	30	0.95	86	4.7	7.3	1	23	861	883	861	883	0.96
15	30	0.0002	0.018	16.3	2.3	1	23	894	916	894	916	0.97
16	30	0.00012	0.01	17.1	0.8	1	23	924	946	924	946	0.97
17	30	0.0012	0.11	13.8	0.3	2	23	966	988	965	988	0.97
18	30	1.1	1e+02	4.5	0.3	1	23	1006	1028	1006	1028	0.90
19	30	0.39	35	6.0	3.0	1	23	1035	1057	1035	1057	0.96
20	30	0.02	1.8	10.0	2.5	2	23	1068	1090	1067	1090	0.95
21	30	0.0042	0.37	12.2	0.2	1	23	1112	1134	1112	1134	0.97
22	30	0.83	74	4.9	0.3	2	20	1138	1156	1137	1157	0.91
23	30	0.027	2.4	9.6	0.2	2	23	1215	1236	1214	1236	0.92
24	30	0.68	61	5.2	4.7	3	23	1244	1264	1242	1264	0.96
25	30	0.0011	0.096	14.0	0.9	1	23	1274	1297	1274	1297	0.96
26	30	0.31	27	6.3	2.8	2	23	1314	1332	1314	1332	0.88
27	30	0.47	42	5.7	2.3	2	23	1405	1426	1404	1426	0.94
28	30	0.0034	0.3	12.4	0.6	2	23	1437	1459	1436	1459	0.96
29	30	5.2	4.6e+02	2.4	0.7	2	23	1475	1493	1475	1493	0.77
30	30	0.65	58	5.3	3.1	2	20	1497	1515	1496	1517	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAGTTGGGAAAATGCCGACTTTGTTTAAAGTTGGGGGACTTTTATTCTATATTCACGGTCGACAATGCCTTACAACTAGCCGAGATGGTTATGGAATGTTCCcgaataaaaGTTTATGAAGGTGATGGATTACCTGACAAGATATGTTCTGAGTGTATACAAAAACTCAGCGGCGCATTTATATTCAAACAACAGTGCGAAAGATCTGACCAAGAGTTACGCCGAAATTATGTCCCGCCACCAGGTTTTAGTGAAACTCCACCACCTCCAAATAGACAAAGCAGCGATTCGGCATTTTCTACACACACGGATACATCCAACCAGACAAAGCAGTCGGTGGCAGACCGCGGTCAGTCACCCCCCGCGCCGCGACGTCGCAAGCGCAGCCGCGACAGCCTCTGCGATACCTCCGCCAGCGGCCGCTCACAAGACTACGCCCCTTCCAAACGCGTCTCCGAACTCCGCGACACTCAAAAGAAACGCCGCACGCAGCCCTCCGAAACTTACGATTCCGACTACGACGACAACAGCGTATCCCATTTCTCGGTCGGCGAAACTGACTCCGACGAGCCTCTATTGAAGTCGGATTACAAGTGCAAAGAATGCGAGCGCACTTTTGCTTCCAGCAAGAGTTTAGCGATCCACATGAGGGTGCATTCTGCCAAAAAGGAGAAGCTCGGTCGCGACGAGGTAGTCAGCATTCCGCATAAAATCACGGCAGATGCTGAGGACGATGACGACAAACTAACCTGCGACAAGTGCGGGAAGACTTTCAAGCTTAAAATCATGCTGAAGAGACATCACGAAGTCTGCGGTACTGCGGTGATGAGTCCGCAAATTTCTCCGCAGAAGCAACTGCTCATCTCTCTGGAGCCCATAGACGCAAAACAACCGAGTAAGCTGGATCTTAATCAGCAAAACAGGATCGATTGTGAAATGTGTTCGACGAAATTTAAAACTATAGATAACCTTCAGAAGCACATGAGAATAGTGCACGCGGCCGTTTTGAAAGGAGACAGACTAAAGACTTTGCTGAACGGGAAGGTCCCGGTGCCGTGCCTCTACTGCCGGAAACCGTTCGCAGACTACTACTTACACAGCGCGCACTTCAACTCGTGTCCGGAGAAAGAAGACACGAGTATCTTCGAATGCGGAGTATGTCAGAAGGTGTCATACAAGAAGAGCGCTTACTTTACACACTTGAAGATGAGTCACTTCGAGCCGCGGTACGGGAGCGAGACGAAGCCTGCTGTGGAGTCGATCAAGGGCTTTGAGTGTAGGATGTGTAGCCAGATGCTGGAATCTCAGGACGCTCTCATAACGCACCTGGCGGCTCACATGTCGCACATCGACGAGCCCGACCATCATCTTGAGAACGACGACGCGGACGATGACGTCATCGCCGCTGATGATGAATCCAGGGCGAGCACCATCGATGATTCTGCGTCAGCTGTGTCAGAATACAGCTCCAGCCATATCACTACTGGACACCTCAAATGCAATATTTGTGACAAAAAGTTCAAATACAAAAAAGCGCTTGAAACTCACAAATTGCGACATACAGACACTGAAATTAAGATCAAAACGGAGCCACCTGATAAAGTTCAGTCAGCAAGTTTGCTCTGTGAGACAAGTAAGCCCGAAGTAGAGTCGGAGTCTAGTCAAGACGAAGGCGACGATAACACCTGCGATATCTGCGAGAAACAGTTCTCTTACAAAAAGTTGCTTATCCAGCACAAGCGGACGAAACACAACCAGTGCTCCGGGACGAAGAGAGCAAAAATAAACCTGAAAGATTGCTCCGTGCGGTGCCTCATTTGCGACCTCGAGATGAAAGTGAGCGCCGTCAACCAGCACAATCACAAACACATATCGGCGAACATAAAGCCCAGGAATTTGTACAGCTGCGCTCTGTGCGATGAAAAGTTTAAGAGTTGTAGCGCATTAGCGGAACATATAAAGTTCGTTCATAGATTGAAACAACCCCCCAAGGCGAAGAAAATACCGAAGATGTTAGAGGGCGGATCGGAGTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAAGCGGAACCCCTGGAAGTACTCCAGAGTCACAACGGCTTTGGCGAGGTTCCGGGCGGCGGCTTCCCTTGCCCGCTGTGCCAGAAGCAGATGCCTACACTAATCTCTCTCAAGAGACACGTCAACTGGCATTCCAACGTTGGCAACAACCTGGAGAAGAAAATCGAATGCTTCGTTTGTAAAGAAtctTTCCGTTTCCAATGTCACTACAAACTGCACATGCGCGAGCATTACAAAGATCCGAACCTGGACCCGAAGTTCCTCACGTGCACCATCTGCAGTCGAAAGAGCAAGCATCTGCGGGCCGCACTCGCCCACATGAACTTCCACAAACAGACCCGCTTCAAGAACAAGGACTACCAATGTTCCATCTGCAAGAGAATATTCCAGCATAGAAAAGTTTATCTGTCGCATATGGCGATACACTTCAAACGTGGAGAAAGCGTCCAGAATACTGTGGTAGGGACTGCGCTTCCTTCCTCCGCTGACAAAACCGTCTTCGATGGAACTCACTCGTGCCATCTTTGCGGGAAAGTGTGCGATTCAGAAAACTCTTTGAAGTGCCACGTCCGGTGGCACAACTCCAAATCTTCCCTGTATGGAGCGAGGCACGAGTGTTACGTGTGTAATTTAGTGTTCACTAACAAGCGAAGTCTGGAACTGCACACCCGGTCGCATTACGAAGACGAAAATGGACCTTTCAAGTGTACGATATGCAGCAAAGGCTTTATAGATGAGGAATATTTCCGGCGACACGTAAAAGGACACAACTTTGACCATCAATCACATAAAACTAGAATAGATAAGCTAAGGAAAGATAAGGTGAAGTGTCCCATTTGCACTCGCTTCTATCCCGACCTGGTGAGGCTCATAAGGCATTTGAGAAGAACGCATCCCGAGAGTAAGATGATAAAGGAAGACCCAGACGCACCGCCGCCTATCTACTACTCCTGCAAACTGTGCGCCAAAGTTTTCCTCGACGAACGGAGGTTGCAATCTCACGAAGAAGCTCATTTGAGAAAACCCCTGTTCTTCAAGTGTAAATTCTGTGGGAAAAATACAATTTCTATGAAAAATCATAACATCCACATAAAAGGTCATTTGACCAAGAATTACTACGATGAACCATTGAAATGTACGCAATGCGAGGAGACTTTCATTAAAGGATACGATTTGCATCACCACCTTCGCGACGTGCACAACATCAAGGAAAGCTGGATCGCTGAACGCACCGAGCAGACCCTCGAGGGCCCTCTCAAGGAGTTCCAATGTGCCGTCTGTCTTAAAGTGTTAGCCAGCAAAGGAAACTTTGAGAGGCACCTCGATTACCACAACTCGTTGAAATGCAACTATTGCTTTGTGTACTTCAGCACCTTAAGGTTCCTGGAAGGCCATCTCGCGTTCAGTTGTGACAAAAAGAAGCTGATAGGCGATACGGAGATATACcccaagaaaataaaatgtatgcatTGCTACAAAGCATTCCATGTTCAAGTAAAATTGGATTGTCATTTACGAATTAAACATGACATTAGAGAGTTCAAAAAAGCTTCGTCTGATAAGAAGGAGACAGTTTGCGATTACTGTTTTAGAGTCTTTGAAAATGAAGACGCTCTGACTGGTCACAAAGTGTACCATCGCACTATCGGCTATTACGGCTGCATGTACTGCAAACGGAAGTTCAACACGATCACTATGTACAACAAACACAAAAACCATCATTTCGCCCAACTAAACGTCGATGAACCATATAAATGCGAACACTGTGACGAGACTTTTGTACCCTTCAGAGAGATGATCTACCATATGAGAGACGTGCACGGCGACGATAAAGATTGGATTGTGATGCCCAAAGATTCCATTGAGGAGACTTGTCCGATATGTAACAAAGTATTCTTCAACCTTCACAAACATTTGACTTATCATGAGGAGAATAGGTGTAAAAAATGCGCTGAGTACTTCTATTCTAGATTAGATTTTGATAACCACCTCTGTGCTATCGAAAGTGACGATGAATCGTTGCAGACTAACGAAAATAGCCTTATGCCTGTTTATGAGGAATGTCGCTTCTGTTTCAAACCCGTCACTCGCTCCAACTCAAAGAGGCTTCACGATAATATTCACAGAACCTCCGGAGCTATATCCTGTCGTTTCTGCCACCTTAAATTCAAAACTATGGATGCTTTTAACATACACGCGTTCTCGCACCGCagtagaaaatataacaagagACCTATAAAATGTAGAAAATGTGGTGAGAAATTTGTAAAGTATGGTCCTTTTATAAAGCATATGAAATATGTGCACAAGTCTACAAAGAAGGTGCATTATCGGGCGGTCGTGAAACCGGAGCGCTGCGTGGTATGCGGGGAAGACTTCCCTAATTTACACAACCACTACCGAGCACATCTTCTGAACCAGTGCCAGCTCTGCCACAAATACTTTACATCTGCCAAAGTTTTCTCTCGCCACGAATGCGGCAAAGAGGACTCTGATCCTTCAAAAGTGTTTGTGTGCGATGAAAACCTGACTGCTTTAATCAACTCCTACGTTCCTAAAGATTTGAAGGATGATGAGAAGTTCTACGGGCGAAGTGATGATGAAGACGAAGAAGAGATTGCGAATGAGCCAGCGCCGCCTGTAGTGAGTGCAACAGATGAAGACAGTCAAACTGCTGACTCTACCTCCACCAAAGTAGCGGACAAATTAAGCCAGGACGAGATAACCTTGCATCAGATGGCATCCTCTCCGATCATATCGGATGTGCTGTCCCTTTACAATGAAGACAAGAAGCAAGTGGTCAGTGAAATAGTCAATTTGACAGACGATGATTCTATGGATATAGAAGTAAGCATACCCGTGATTACTATTGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMVMECSRIKVYEGDGLPDKICSECIQKLSGAFIFKQQCERSDQELRRNYVPPPGFSETPPPPNRQSSDSAFSTHTDTSNQTKQSVADRGQSPPAPRRRKRSRDSLCDTSASGRSQDYAPSKRVSELRDTQKKRRTQPSETYDSDYDDNSVSHFSVGETDSDEPLLKSDYKCKECERTFASSKSLAIHMRVHSAKKEKLGRDEVVSIPHKITADAEDDDDKLTCDKCGKTFKLKIMLKRHHEVCGTAVMSPQISPQKQLLISLEPIDAKQPSKLDLNQQNRIDCEMCSTKFKTIDNLQKHMRIVHAAVLKGDRLKTLLNGKVPVPCLYCRKPFADYYLHSAHFNSCPEKEDTSIFECGVCQKVSYKKSAYFTHLKMSHFEPRYGSETKPAVESIKGFECRMCSQMLESQDALITHLAAHMSHIDEPDHHLENDDADDDVIAADDESRASTIDDSASAVSEYSSSHITTGHLKCNICDKKFKYKKALETHKLRHTDTEIKIKTEPPDKVQSASLLCETSKPEVESESSQDEGDDNTCDICEKQFSYKKLLIQHKRTKHNQCSGTKRAKINLKDCSVRCLICDLEMKVSAVNQHNHKHISANIKPRNLYSCALCDEKFKSCSALAEHIKFVHRLKQPPKAKKIPKMLEGGSELADFCEVVVTKAEPLEVLQSHNGFGEVPGGGFPCPLCQKQMPTLISLKRHVNWHSNVGNNLEKKIECFVCKESFRFQCHYKLHMREHYKDPNLDPKFLTCTICSRKSKHLRAALAHMNFHKQTRFKNKDYQCSICKRIFQHRKVYLSHMAIHFKRGESVQNTVVGTALPSSADKTVFDGTHSCHLCGKVCDSENSLKCHVRWHNSKSSLYGARHECYVCNLVFTNKRSLELHTRSHYEDENGPFKCTICSKGFIDEEYFRRHVKGHNFDHQSHKTRIDKLRKDKVKCPICTRFYPDLVRLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQSHEEAHLRKPLFFKCKFCGKNTISMKNHNIHIKGHLTKNYYDEPLKCTQCEETFIKGYDLHHHLRDVHNIKESWIAERTEQTLEGPLKEFQCAVCLKVLASKGNFERHLDYHNSLKCNYCFVYFSTLRFLEGHLAFSCDKKKLIGDTEIYPKKIKCMHCYKAFHVQVKLDCHLRIKHDIREFKKASSDKKETVCDYCFRVFENEDALTGHKVYHRTIGYYGCMYCKRKFNTITMYNKHKNHHFAQLNVDEPYKCEHCDETFVPFREMIYHMRDVHGDDKDWIVMPKDSIEETCPICNKVFFNLHKHLTYHEENRCKKCAEYFYSRLDFDNHLCAIESDDESLQTNENSLMPVYEECRFCFKPVTRSNSKRLHDNIHRTSGAISCRFCHLKFKTMDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVKYGPFIKHMKYVHKSTKKVHYRAVVKPERCVVCGEDFPNLHNHYRAHLLNQCQLCHKYFTSAKVFSRHECGKEDSDPSKVFVCDENLTALINSYVPKDLKDDEKFYGRSDDEDEEEIANEPAPPVVSATDEDSQTADSTSTKVADKLSQDEITLHQMASSPIISDVLSLYNEDKKQVVSEIVNLTDDDSMDIEVSIPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -