Mnit016378.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- ham
- Assembly
- GCA_949126915.1
- Location
- OX421428.1:11141412-11171406[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.5 4.2e+02 1.9 0.0 18 43 138 160 128 161 0.82 2 6 0.044 37 5.3 0.9 17 43 196 219 163 220 0.81 3 6 2.4 2.1e+03 -0.3 3.8 3 28 268 293 266 300 0.80 4 6 6.1e-05 0.052 14.4 0.1 18 41 693 713 679 715 0.89 5 6 7.5e-05 0.064 14.1 2.2 17 44 720 744 713 744 0.88 6 6 2.1 1.8e+03 -0.1 0.4 19 41 751 770 745 771 0.72
Sequence Information
- Coding Sequence
- ATGTTGCGTACACACTTCGCGAATCCACCGCCCCTCTCTTTCACACATTTCAAGAGAGAAAGAAAAGGCAATATCGACACCGTTACTAATCGTCTTAATCTGTACGTGAAGATCAAGAGGGTCCTTGGTAAGAACGGCATCAGGGGATGGCTGGACGGTACCTCGGAGAAGACCAACTGGCTGAAGTTGGTCCGGTCTACCAGCTACCCTCGGGATGTCAATGTGCAGCCGTTTCTTCACGCCGGGCAGGTGTGGTACAAGGTGGCCCGGGAGATCATCCCCGGGCAGGAGCTGCTTCTTGGGCGGAGAACACCACTGCCTTTGCAAGACGTGCTACCTACTACAGAGCCACCAAGACTTAGCAGCTCGCAACCTTCGGCCGAGGAAGAGGAGAGGGAGGAGGACGAGCCCCGTTGCACCTATTGCGAAGCCCCATTTCCCAACATCGACGTACTCGACCGCCACCTGATACAAGCGCACGCGCAACCATCAGCGGCATTCCCCTGTGAGCTGTGCAACCGCGCCTATAGTTCTCGAGCACTTCTTCTGCGCCATCGAGCCATTGCCCATTCCGACATTAGGAAATATCCTTGCGAGAATTGTCCGAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATTCGCGCGCAGCACGCGGGTGCCCGCAGCCACGCGTGTCCAGAGTGCGGCAAGACCTTCGCCACCTCCTCCGGACTTAAGCAGCACACACACATCCACTCCAGCGTCAAGCCTTTCCAGTGCAAAGTCTGCTTCAAGtCGTACACCCAATTTTCCAATCTTTGCCGACATAAGCGGATGCACATCGCGTGTCGCGCGCTCGTGGAGTGCGGGAAGTGTGGACAGTCGTTCACATCGTACGCCTTGCTCACAAAACACAAGCGTTTCTGTGAGACTGCCTCTGCCTCCGTTAACCTTCGCGGACAAATGCCACAAGGACTTCCGCAAATTCCACCTCTGCCAAACATTGGAATGAGCAATCCAAATAGCGCCAACCCCTTTCCCCTGTATAGGGGACCGGGTTTACCGCTTCCATACAATTCATTTGCTCACTATCCAGCTCTTTTCTCTGCTGCAGCTGCCGCTTGCCAACCAGATTTTCTCAACCCCTTACTATTTAACGTACAAGGTGCTAGATTAGCCATGGAACATGACCTGGCATTATCTAACGCAAATATGGCAGCAAAGCAACAGGAAGGTCGCATGTCAGTCAAAAGCATTGATAGCTCGACTTCATTGGACGaaattaagaaaaaagaaatcgATTTTGAAAGCAATACGAGAATCACTGAAATCCCTGATAGAATTACACCTAAATCACACAGCATGTTTACAAAACAGTCTACACCATCTCTCGAAGAAACGTCGCAACACCGCCCATCTCCTATCATGTCAGTAGCGACCCCTATTGCTCCTTTTCCATTTATACGAGATGAATTAAAGCAAAAATCACCATTCGGATTTCCAATAAAGCTCAACAATAATGATGTAGACAGAAGATCATATTCCCCATCTCTTCCAAAGGATTTGTCAAAGAACGTGATCAAAGAAGAAGTTAAGACAGTTATTTCAGACGTCGAAGATGACATGAAAAAAGACCAGGGCGACCAACCCTTAGACTTATCTGTTTCACGAAAAAGCGATAAGGAATCAGAAGGCGATAATGACGATCGCTCCTATCGAAATTCCTCTATGAAGTCTTACTCTCCACCTGAAAGTCCAATGGAGCGAAGCAAAACTCCTGAGAACGATACCACAGACGTAGATGTCGAAGCTGTGGAGCCTAAACGAGATGATTCACCTTTGATATCGCCAACTCTAGCCTTTCCTATGCCCGTCCATCCTCAGCATAACTTAATAGATGCAATGTACCGCCCAAGATTTCCGTCCTTCCCAACTTCAGAATCGCTTTTGACTTCGTCGCACTCGCCATATGTTCCGAgtccttttaattttttatcccCACTTCTCGGTACTGATGGTCCAGAGCGGCAACAAAGTGCATACGCGAAATTTCGAGAATTAAATACTGGAGCAAAGCTTCGAGATCGTTACGCATGCAAATTCTGCGGGAAGGTGTTTCCTCGCAGCGCAAACTTGACCCGTCATTTGAGGACGCATACTGGAGAGCAACCTTACAAATGTAAATACTGCGAACGTTCGTTCTCAATTTCTTCAAATCTGCAGCGACATGTGCGGAATATCCATAACAAAGAGAGACCATTCAGATGTCCTTTGTGTGATAGATGTTTTGGCCAGCAGACGAACTTAGACCGGCACTTGAAGAAACATGAGGCTGAAGGAGGGGATTCTCCTAGTTCGGCAGACACAGAAAGAGAAGATGCGTACTTTGACGATATTCGATCATTTATGGGAAAGGTGACTTGTTCTCCCAGTGGAACTCCGCCTGCGACATCCCCTCATGCGACTCATAGACCTTCCTTGGCTATTTCTACATAG
- Protein Sequence
- MLRTHFANPPPLSFTHFKRERKGNIDTVTNRLNLYVKIKRVLGKNGIRGWLDGTSEKTNWLKLVRSTSYPRDVNVQPFLHAGQVWYKVAREIIPGQELLLGRRTPLPLQDVLPTTEPPRLSSSQPSAEEEEREEDEPRCTYCEAPFPNIDVLDRHLIQAHAQPSAAFPCELCNRAYSSRALLLRHRAIAHSDIRKYPCENCPKVFTDPSNLQRHIRAQHAGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKSYTQFSNLCRHKRMHIACRALVECGKCGQSFTSYALLTKHKRFCETASASVNLRGQMPQGLPQIPPLPNIGMSNPNSANPFPLYRGPGLPLPYNSFAHYPALFSAAAAACQPDFLNPLLFNVQGARLAMEHDLALSNANMAAKQQEGRMSVKSIDSSTSLDEIKKKEIDFESNTRITEIPDRITPKSHSMFTKQSTPSLEETSQHRPSPIMSVATPIAPFPFIRDELKQKSPFGFPIKLNNNDVDRRSYSPSLPKDLSKNVIKEEVKTVISDVEDDMKKDQGDQPLDLSVSRKSDKESEGDNDDRSYRNSSMKSYSPPESPMERSKTPENDTTDVDVEAVEPKRDDSPLISPTLAFPMPVHPQHNLIDAMYRPRFPSFPTSESLLTSSHSPYVPSPFNFLSPLLGTDGPERQQSAYAKFRELNTGAKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPSGTPPATSPHATHRPSLAIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282611;
- 90% Identity
- iTF_01020532;
- 80% Identity
- iTF_01020532;