Mnit019309.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- -
- Assembly
- GCA_949126915.1
- Location
- OX421431.1:13335566-13337461[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 4.5e-08 33.5 0.0 1 43 15 57 15 59 0.89
Sequence Information
- Coding Sequence
- ATGGTGTTTCATTATAAACGAAAAACTAATCGAGCAGCATGGTCAGAAGATACATTGGCCAGAGCAGTAAAAGCTGTAAAAGATGATGGACAATCAATTAATTCAACCGCAAAGAAGTTTGGAATTCCATTTACAACTTTGCAGAGACATGTGAAGTCCGGCAATAAGTCGAAGAAATTGGGTAGGTTCACATCGGTTTTTAGTCCAAAACAAGAAGAAGATCTGTGCTTCTatctaaaaaaattagatagtttattttttgGGCTTACTCGTTCAGATTTTTTAGAACTAGTGTATAATTATGCAACAAGAAATCATATTTCTCATCCATTTAAAAATGGCAAAGCTGGAGACGACTGGTTTTCTGGTTTCAAGCGTCGACACCCAGAAATTGTACTAAGAGCACCTGAGCCAACATCATTGGCAAGAACAAGAGGCTTTAACAGACCTCAGGTagagttattttatactaatttttgGAACCTGATAGAAAAATACAATTTCGATGCaactacaatatataatatggaCGAGACCGGAATAAAGAGTAGTACGTCTAAACCACCCAAGGTTTTGTCTATCAAAGGTAAAAGGCAAGTCGGAGTAATATGTAGTGCAGAAAGAGGACAATTAACAACCGTCATATGTTGTTGTAATGCAGCTGGAACTTTTGTTCCACCCTTTTTCATATTTGCCCGCAAACGTATGCAAGAACGACTTCTAGATAATGCCCCACCAGGCTCACAAGCCACCGTTACTGACAACGGTTGGATACATGGAGAAGCTTTTTTGAATTGGTTGCAATTTTTCGTTGAGAAGGTTCGTCCAAGTGAGACCAGAAAAGTGTTACTGTTGCTCGATAATCACGAGTCGCATAAATTTTATCCGGCCTTGGAATTTGCAACAAAAAATCACATCATCTTTTTGTCATTTGCCCCACACACAACTGACCGGATGCAACCTCTAGATGTGGCTGTGTATGGGccccttaaaaaatattttgaacaagAGTTGAACACCTTTCAAAAAACGCACCCTGGCCGAATTGTAAACCAGTACGATATGGCAAAACTATGTGGGGGAGCGTATGCCAAAAGTGCGTCGGTTCAGAATGCAATTAATGGGTTTAAAAAACCGGGAATCTGGCCTTATGATCCAAATGTTTTTGGAGAAGAAGATTACGCTCCTTCAACTATGACCGACCCTTTTCCTGACACACCATCTACTATGACTGAAGATACTGTAAATAATGCACCGTCAATAATGCCCATAGATCTTTTCAATGGTACATCGTCTACTATAAGCGCTTTAAATGATTCTCCAGCAACAAGAATGACGACAGACCCGGTTGCATCTGTTACCGCAGAGGTGGCAGCAGCTGAATCTTCCACACAGTCCGTTATAAATTCAGAAATAGAGAGAGAAAGGTCTACTACACCTTTGCCTGATTGCAATACGCTGGAAGAAGGATCAACTCATTCACTAGGAGAAAAACATCCGCCGCCATCAGCGAGCCTTACGCCATTTCAAATTAGACCTGTTCCAACTATGGCTGCTCCTAAAACAGGCCGCAAACACAAGAGGCAGAAATCAGAGGTGTTGACGTCTACTCCTGTCAAAGCTGAGCAAGCATTAAAATTTGAGAAGGCAAATATTATGAAGACCAAGATTTCCGAGTTGGCAGGACCcagcaaaactaaaaataaaatatcatcagTCAAAAAACCAAACAAACAGCCGAAACCagatttttattgtttagtgTGCGCTGACAAATACACTGAACCTCCAGCGGAAGATTGGATTCAGTGTAATCAGTGCAAAAGTTGGGCACATGAAGACTGCACTTCTTATGTAGGGGTTGGCAGTTACTTCTGTGATGAATGTGAAGACTGA
- Protein Sequence
- MVFHYKRKTNRAAWSEDTLARAVKAVKDDGQSINSTAKKFGIPFTTLQRHVKSGNKSKKLGRFTSVFSPKQEEDLCFYLKKLDSLFFGLTRSDFLELVYNYATRNHISHPFKNGKAGDDWFSGFKRRHPEIVLRAPEPTSLARTRGFNRPQVELFYTNFWNLIEKYNFDATTIYNMDETGIKSSTSKPPKVLSIKGKRQVGVICSAERGQLTTVICCCNAAGTFVPPFFIFARKRMQERLLDNAPPGSQATVTDNGWIHGEAFLNWLQFFVEKVRPSETRKVLLLLDNHESHKFYPALEFATKNHIIFLSFAPHTTDRMQPLDVAVYGPLKKYFEQELNTFQKTHPGRIVNQYDMAKLCGGAYAKSASVQNAINGFKKPGIWPYDPNVFGEEDYAPSTMTDPFPDTPSTMTEDTVNNAPSIMPIDLFNGTSSTISALNDSPATRMTTDPVASVTAEVAAAESSTQSVINSEIERERSTTPLPDCNTLEEGSTHSLGEKHPPPSASLTPFQIRPVPTMAAPKTGRKHKRQKSEVLTSTPVKAEQALKFEKANIMKTKISELAGPSKTKNKISSVKKPNKQPKPDFYCLVCADKYTEPPAEDWIQCNQCKSWAHEDCTSYVGVGSYFCDECED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020184; iTF_01491821; iTF_00667312; iTF_00771817; iTF_00783371; iTF_01491822; iTF_00850577; iTF_01094833; iTF_01331391; iTF_00906054; iTF_01221459; iTF_01221458; iTF_01526999; iTF_01527001; iTF_01527002; iTF_01527003; iTF_01527004; iTF_01527005; iTF_00124184; iTF_01221456; iTF_00172697;
- 90% Identity
- iTF_00124184; iTF_01020184;
- 80% Identity
- -