Mnit023801.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949126915.1
- Location
- OX421436.1:10727712-10774109[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-14 2.4e-11 44.0 0.0 1 39 294 333 294 338 0.93 2 2 4.9e-18 1.8e-15 57.2 0.0 1 43 499 542 499 544 0.95
Sequence Information
- Coding Sequence
- ATGAAGTATTTTAATGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGTAGAAAATGGAAACTATGCCAAGACGCGTTAATACCAAAGAGGAGCGAGGCGGACTCTGCGAGCGACGACTCACTGCCCGGCTCCGACCCGCCGCCGGCCCTCAAGATCAAAACCATCGAGCAGATCAACGCGCCAGACAAGGACGCCGGAAAGAGACGCCCCGAGACCATACTGGAGTCCCTCATCAAAAGACCGGCCACCCAACCCAAACTGGAACTCACCGAGGAACCCACAGATTGGAAACCTCAGGACAAGTGTTACTTCTGTGTGGACGAGGAGAGGGCTGATTCTGTGGACCCAGAAAGGGGAGGCGCGATCGTGACGAATCGGGACAACGGCACATCGATGCAATGCAACTTTGGAAAAATGAACACCGAGCTACGAACAAACGATTTAGAGAGTCCTGCGTCGGAGTCTGACAGTAGCTCGGTGTCAGGCGCCAAGAGCCCTGCGGGGGCCCCTCCTCTCCTCCAACACCTGCTACAGCTGCAGCTGCAGGCGCAGAGTCCACAGGCCATCGCGCAGTTCCAGCAGATGGTGGCTGCGCTGGCGACGCTGGGCTCGGGGCTGGTGCCTCCCGCAGTGCTCTCGCAGGTGTGGCTGATGCAGCGGCTGGCGCAGAATAGACATGGAGCTGACCGGTTGCCAGAATCCAGTGAGAAGCCACCAGCGCCCTCGTCGCCGACCTCCGCGGAGCAGCCTTTGGACCTGAGCGCCAAGTCCACTTCCAGCACCAGTGGAACACCACCTCCTGACGCTAAGAACTCGGATAACAGATTGAAGCGTGGTATTCTTGATGCAAGCAATCACGCCACGCGGCGGACATACACGGACGATGAGCTGCAGTCGGCCCTCCGCGACATCCAGTCGGGCCGCCTCGGCACGCGCCGCGCCGCCGTCGTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAAGTCAACAAGTTCGGACCTGCCGAGCAGCACGACTCCGAACCAGACAGCGACGCGGAGAGGCCGGACTCCCCGCAGTCCGTCATACTGAAGATTCCGACGTTCCCTCCCCTGGACGACAAGAGCCCTTCTCCGGCGACCCCCGTGTCCGCGCCCGTCACCCCGATCACGCCGATCATCCCCGCGCCCCAGCCGCAGCTGAACCCCCCCACCCATCTGCCCGCATTCTTCGCCGACTCCCCCGCAAACCAGCACATCTACACGTCCATCAACGACGTCATAGTCCGAAGCATCAGCCAGAAGTTCCAGCAGCTGCCGGACCGACAGCCCCAGCCGTCAGACCTGCCATACATGCGGGCGCCCGACCGACACGTCTCGGTCATCAAAACCCCGCCCGACAACCAGCGCAACTACCAAATGCCGAGCAACTCGAAGGCGTCCACCAACAACGGGCAGCCCGCCATCGGCGGCAAGGGAACGCGCCCCAAGCGAGGCAAGTACAGGAACTACGACCGGGACAGCCTCGTCGAGGCCGTGAAGGCGGTTCAGAGGGGCGAGATGTCCGTGCACCGAGCGGGCTCCTACTACGGGGTGCCGCACTCGACCCTCGAATACAAGGTCAAGGAGCGGCACTTGATGCGGCCGAGAAAGAGGGAGCCGAAACCGCAGCAGGATCCGAAGCCGCCGCCGAAGCCGCAGCCGAAGCCGCTGCCGACGAAACCCTTCTCGAACGGACTCAACGGCCCCGAGACGCCTGCGTACCCGGCCGGGTACCCGTTCTGGCCGGGCGCCGGTTTCCCGCCGCCCTCGCCCGACTTGTACGCGTCGCACATGATGCGGCGCCTGCGCGAGGAGGCCCCGCCGCCCGCCAACGGCTCCTTCCTCGAGGGGATCATCCGCTCCAGCCTCGAGCGGCCCGGTGCCGCGCTCATGCACCGCCTCACCGAGCCGCGCGCCCTGGCGCCCGACGCGCCCAGCCTGCTGCGGCGGCTGGCCGGCGGCGACCCAGCCGGCGCTGCGGGCCCGGCCGGCGCGGGCGGAGCGgggggcgcgggcggcgggGCTGCGGCCGGAGGCGACGAGCCCCCAGCGCGCCGCGCCCGCGTCGGCAGCTCGGACCGGCAGCTCGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAATGGCACGCCCACGCCGCCCGCGCCGCCCTCCCCGCGCGCGCCCTCCCCCGCGACGctcgccgcccccgccgcccccgccgcgcccgcgccgcccGACCGCGTCTAG
- Protein Sequence
- MKYFNGLERVAEELMGRRKWKLCQDALIPKRSEADSASDDSLPGSDPPPALKIKTIEQINAPDKDAGKRRPETILESLIKRPATQPKLELTEEPTDWKPQDKCYFCVDEERADSVDPERGGAIVTNRDNGTSMQCNFGKMNTELRTNDLESPASESDSSSVSGAKSPAGAPPLLQHLLQLQLQAQSPQAIAQFQQMVAALATLGSGLVPPAVLSQVWLMQRLAQNRHGADRLPESSEKPPAPSSPTSAEQPLDLSAKSTSSTSGTPPPDAKNSDNRLKRGILDASNHATRRTYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGPAEQHDSEPDSDAERPDSPQSVILKIPTFPPLDDKSPSPATPVSAPVTPITPIIPAPQPQLNPPTHLPAFFADSPANQHIYTSINDVIVRSISQKFQQLPDRQPQPSDLPYMRAPDRHVSVIKTPPDNQRNYQMPSNSKASTNNGQPAIGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDPKPPPKPQPKPLPTKPFSNGLNGPETPAYPAGYPFWPGAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLTEPRALAPDAPSLLRRLAGGDPAGAAGPAGAGGAGGAGGGAAAGGDEPPARRARVGSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAPPSPRAPSPATLAAPAAPAAPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01124528;
- 90% Identity
- -
- 80% Identity
- -