Mdom005112.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- nfxl1
- Assembly
- GCA_000371365.1
- Location
- Scaffold18601:319340-324317[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.4e+04 -8.1 6.4 15 19 160 164 159 164 0.82 2 21 0.13 9.3e+02 -0.3 0.4 4 10 195 201 194 201 0.95 3 21 1.8e-08 0.00013 21.6 16.0 1 18 209 225 209 226 0.98 4 21 1.5e-07 0.0011 18.6 14.9 1 18 262 280 262 281 0.96 5 21 1.6 1.2e+04 -3.8 1.2 6 10 306 310 305 310 0.88 6 21 3.7e-08 0.00026 20.6 12.5 1 19 316 334 316 334 0.99 7 21 2 1.4e+04 -4.7 2.6 13 18 350 359 349 364 0.54 8 21 1.2 8.6e+03 -3.4 0.4 1 8 359 365 359 366 0.59 9 21 1.9e-05 0.13 12.0 10.1 3 18 371 386 369 387 0.89 10 21 0.31 2.2e+03 -1.5 0.4 1 5 396 400 396 405 0.75 11 21 2 1.4e+04 -5.0 2.3 5 10 410 415 410 415 0.91 12 21 0.024 1.7e+02 2.0 15.9 1 18 421 438 421 439 0.91 13 21 1.6e-10 1.1e-06 28.2 14.5 1 19 448 466 448 466 0.98 14 21 0.053 3.8e+02 0.9 9.9 9 19 511 521 502 521 0.89 15 21 0.0038 27 4.6 5.2 1 11 533 542 533 543 0.95 16 21 0.33 2.3e+03 -1.6 0.9 6 10 600 604 599 604 0.90 17 21 3.9e-06 0.027 14.2 5.4 1 12 610 621 610 621 0.97 18 21 2 1.4e+04 -4.4 1.5 15 18 634 637 634 638 0.85 19 21 0.004 29 4.5 16.2 3 19 650 666 649 666 0.92 20 21 2 1.4e+04 -6.8 3.1 10 13 673 676 672 676 0.68 21 21 1.2e-06 0.0088 15.7 11.6 1 17 717 735 717 737 0.86
Sequence Information
- Coding Sequence
- ATGCCTCCAGCAAAAGCCAAGAAACCTCAGTCAAATAACGCTACAAATGCCATTCAAAAATTCAACGAAGTCCATGCCCGGAACATCGATGTTGCTAAGAAAATGGTGGAAAACTATGAATCCTCTGATTCCGACGAGGATGAGCTGGATGAAAAGACTATTTTAAATTCTTTATATAAGCATTATGCCAAAGATGCGGTAGACGAACATATGCTGGCTAAAACCAGCAGTTTTCTAGAAAATATCTTGCAGTCCGGTGCGGCTACGTGCCTAATTTGCATTGGTAGTATAAAACGGGCAGATTCAGTTTGGTCATGCCGACATTGCTATTGCCTTTTTCATTTGAACTGTATAAAACGATGGGCCAATGATAGTATGGCCCAGATCAAAGCGAAGACCCAGAATGATCAGCAGGGATATTATAATAATATGGGGGAATATGTTCCCCCAAAGAAGCAAAAGGCACTTCACTGGTGCTGTCCTCAGTGCCGAAAAGAATTTGCGCCCGAGGAAAAACCATCGACATACGAGTGCTTTTGTGGCAAAGAAATAAATCCACCTTCTCAACCCTGGCTAGTGCCTCATTCGTGCGGAGAAATATGTGGGAAAGCACTCCAACCAAATTGTGGTCACAAATGTACGCTCCTGTGTCATCCTGGTCCCTGTCCACCATGTGCTCAATATGCAAACACAACATGCAAATGCGGCAAATCTCCTCCAAAATCTGTTCGCTGCATTGATAAAGAATGGGAATGCCAAATAAAATGTGATCGCCGTCTAAAGTGTGGAGAACATACTTGTGGTAGAATATGTCATAAGGCAGGGCAATGTCCACCCTGCAATAAGACTAGTGAACAACGTTGCAAATGTGGCAGAGAATCCGCCAAGAGACTGTGTTCTGACTTGGAGTGGCAATGTAAGAATGTCTGTAACCGTAAATACTCATGTGGACTACATGTCTGCAAAAAGATATGCCATACTGGCGATTGTGGTGAATGTCCGTTGAGTTTACCACGCTCTTGTCCTTGTGGGAAAACTAAAAAAGTTGGACCCTGTACGGAGACAATAGAGCCCTGTGGTGATACCTGTCAAAAGTTATTGCCTTGTCAGCTGCATAGTTGCACACAGCGGTGCCACAAAGGCAACTGCAATTTGTGTCTagtaattattaaaaagaaatgcCGTTGTGGTATGCATGAAAAAGAACTGCCCTGTTCCAAGGAATTTACATGCGAAACGAAGTGTAAGCAAATTAAGGATTGTGAGAAGCATCCATGCAACCGCAAGtgttgCGATAAAAATTGTCCCCCATGTGATAAAGTTTGCGGGAAACCTCTATCCTGCGGTAAACACAAATGTCAATCTATCTGCCACAAAGGCCCATGTTATCCGTGCCAACAACAGTCGCAAATTCACTGCAGATGTGGCAAAACAAAGAAAGTGGTTCCGTGTGGTCGAGAACGTACAGCCCGTGTGGTCTGCATGGAACCTTGCAGAATTCCCTCAAAATGTCACCATTATAATAAACATCGTTGTCACAAAAATGAGTGTCCACCATGTTCACAACCTTGCGGATTACTGAATGACGTCTCAAAATGTGGTCACATATGTAATGCCAAATGCCATGCTGCTGTAAGGACAATTAAGAAAACGAATAATTCTAGCATTTGGGAACCAACGAAACAGgTGGAATTTAAACCTATGCCACATCCTAGATGTGAGCACAAAGTCTCGGTAACTTGTATAGGAGGACACGAAGTCTCCGATTGGCCCTGTTGGAATTCTAAACCAAGTTCATGTCAACGCTTATGTAACCGTCTGTTGAAATGTGGAAACCACAAATGTCCTCTCGTTTGCCATAGCGTTCCCGATATAAAAGATATGAACCAACAAGTCGGCTGTGCTCCTTGTGAAAAAGGCTGCAACATTCCACGCCCAGAAGGTTGTACTCACCGATGTCCCAGACCATGTCATTTGCCACCATGCCAGCAATGCAGTGCAGCAATTAAAACCAAATGTCATTGCGGCCTTATGTCTATAGTCTATAAATGTAGTGATTACTATAGCGCGGAAGGCACAGATAACGATGTAGCTGAAAGacaggaaattttaaaaagttgcGGCAATCGTTGCCTAAAAAATTATCCCTGTGGCCATCGTTGTGTTGCTAAATGCCATTCTGGCCCTTGTCCTTATCCAGAGGCTTGTCGGaaaaaaaTCCGCATATTTTGTACATGTAAACGTCTTAAAATGGAAGTTCCATGCGACAAATATCGTTCCGGCTTTAACATTCTAGATTGTGATGAAAATTGTGTGGAAACACAGAGAAACATTGAAATGGCTCGTCAGCGGGAGCAAGAACTGTTACGAAAGCAAGAAGAGGAGCGCAATCGCTTAGAAGTTGAACAATTCgaaaagaaatttaacaaaCGCAAGCCTAAAGAACGTAAGCCAGTAGAGGTTAAGGCCAAAGCACCAACTAACTGGAAACTAATTGGGTTGTACATTGGTATTCTAGCAGCCATAGCATTAGCTGTAGCCTTGGCTTTGTATGAGGAGCATTAA
- Protein Sequence
- MPPAKAKKPQSNNATNAIQKFNEVHARNIDVAKKMVENYESSDSDEDELDEKTILNSLYKHYAKDAVDEHMLAKTSSFLENILQSGAATCLICIGSIKRADSVWSCRHCYCLFHLNCIKRWANDSMAQIKAKTQNDQQGYYNNMGEYVPPKKQKALHWCCPQCRKEFAPEEKPSTYECFCGKEINPPSQPWLVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYANTTCKCGKSPPKSVRCIDKEWECQIKCDRRLKCGEHTCGRICHKAGQCPPCNKTSEQRCKCGRESAKRLCSDLEWQCKNVCNRKYSCGLHVCKKICHTGDCGECPLSLPRSCPCGKTKKVGPCTETIEPCGDTCQKLLPCQLHSCTQRCHKGNCNLCLVIIKKKCRCGMHEKELPCSKEFTCETKCKQIKDCEKHPCNRKCCDKNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQQSQIHCRCGKTKKVVPCGRERTARVVCMEPCRIPSKCHHYNKHRCHKNECPPCSQPCGLLNDVSKCGHICNAKCHAAVRTIKKTNNSSIWEPTKQVEFKPMPHPRCEHKVSVTCIGGHEVSDWPCWNSKPSSCQRLCNRLLKCGNHKCPLVCHSVPDIKDMNQQVGCAPCEKGCNIPRPEGCTHRCPRPCHLPPCQQCSAAIKTKCHCGLMSIVYKCSDYYSAEGTDNDVAERQEILKSCGNRCLKNYPCGHRCVAKCHSGPCPYPEACRKKIRIFCTCKRLKMEVPCDKYRSGFNILDCDENCVETQRNIEMARQREQELLRKQEEERNRLEVEQFEKKFNKRKPKERKPVEVKAKAPTNWKLIGLYIGILAAIALAVALALYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817098;
- 90% Identity
- -
- 80% Identity
- -