Mdom007410.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- Znf711
- Assembly
- GCA_000371365.1
- Location
- Scaffold18825:282338-288824[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0011 0.055 13.6 1.8 1 23 128 150 128 150 0.98 2 14 1.5e-05 0.00076 19.5 0.4 3 23 442 462 441 462 0.98 3 14 1.3 66 3.9 2.4 1 23 538 561 538 561 0.93 4 14 0.083 4.1 7.7 2.0 2 23 643 664 642 664 0.95 5 14 0.016 0.78 10.0 1.4 2 23 869 890 868 890 0.95 6 14 0.0075 0.37 11.0 0.7 1 23 896 919 896 919 0.96 7 14 0.85 42 4.6 0.4 1 23 956 979 956 979 0.97 8 14 0.0021 0.1 12.8 0.7 1 23 993 1016 993 1016 0.97 9 14 2.2 1.1e+02 3.3 1.4 1 21 1296 1316 1296 1317 0.93 10 14 0.00011 0.0052 16.9 2.2 1 23 1336 1358 1336 1358 0.99 11 14 0.013 0.63 10.3 0.9 1 23 1363 1385 1363 1385 0.99 12 14 0.0021 0.11 12.7 5.7 1 23 1391 1414 1391 1414 0.94 13 14 0.0061 0.3 11.3 0.3 1 20 1419 1440 1419 1443 0.94 14 14 1.5 76 3.7 4.8 2 19 1450 1467 1449 1472 0.89
Sequence Information
- Coding Sequence
- ATGGACGATaaaaaaaGTATACAGGATTGCAAGGACTATTATTCATCCGTCTGTCGAACATGTTTGCAAGCAAATGgagaaatgcaaaatttaagcgCGCCCATGAATGGCGGTGCTGACAGAAGTACATATTTGGATTGTCTCAACTACTGTATGCCTAGCTATAGCGGAGTTACGGAGGAAACCGATGCCCTGCCCCTGTGTATATGCAAAGATTGTGCATCCGCATTACAAGTGGCCTATTGGTTTATGAAAAATGCCACCAAAGCCCAGGAAGTGCTAAAAATTCGTATCAATgaaatcaaagaaaaacaaaagcaactcgaACGAGAGGAGGCGGCCCAAGCAAAGGCAAGCGAGGAAGTAAAGAAGCCCAAACGTTATCGTTGTAAAATTTGCaatacaaaattggaaacaaaGAGGTCTTTAAAAGATCACGTCAAATTGCATTTGGATATAATTGCCTATAATTGTCAATTATGTGGATTTGAACATCATCAACGCAATCATTTAATACAACATTATCAATTTACGCACGGCGTTGAACCAACCCCTGAACAATTGAAGCCCAAGACAAAAATTACACCTCCCATTAAAAGCAGCAATAGCACATCCACCAGACAAACTGTTAATGGCAGCGGACAGAGACAGCAATTTCTACAACAACCACTGTCAAACTCAGGTGAAGTTTATGTTGATAACCACCAGCCCGTAGCAACAGCACAAAACTCTCATGAAATTATTTACACAAGTGCCccacaaaatcaaaatatcgtttATGCCACCGCCATAAATACCCAAACAACAACGGCTCCCCTGGAGGGAAATGCTGCAACAACGACAATTTTTGCCCAAACAAATGGAGAGGCATTTACATTCAATTCCGGCTTTGAAGGAAATCTCAATATGCAAAATGACACAAATGTTGGTAATGAATTTATTGTTATGGCCGATGGGTCTGTGGAAAATGTTATGGGCAAGGGTGTTGTTATTGAATACATTAATGCTGGAGATGGTACAACTTTGTCCTTGGACAATGGATTGGTgctcgaaaatattcttcaggtCCCAAATGATGGCAGTACATCGAATATTATTGTGTCACAAGATAATGGCAATACAAATAACCTGGCGCTTACACAAAGCGATGCAAACGCCACCAGTATGATAATTTCAAACAATGATATGGTGCAAATGGATGTGGATGATATTATTGTGGAGGATCCAGAGAATACACCAGAACAGACACAAGATGTACCCATATCCCCCATTGACGAAGACATGATCCCCGCCACATTTATTGAACAgccaaaaagaaatatttgcaaaatatgtGCCAAAGAATTTGATACACAAGATGAGCTGAAAACCCATATGTTGACACACAATGAAATTCCACATTTCTTCTGCGATCATTGTTCATTTTATACCTtctttaaaattgatttaaatcaaCACTACAAAAGCAAACACAACATCCAGCCGACAAACAAGCAGCTACAACCGAAAAATAAACCAACCACACGTTGTGCGGACGCTGAAATGGatccacaaacaaaaaatgccaTTGTTGAGAAAATTGAACGTTTTGCCAGATCTCCGAAATTGGTATACAGTTGCGATATATGTTTCTATGAATGTGATTTGAAGTATGAAATTAAACGGCATTATCTGGCCAAGCATTGCATGAATGTACAGGATATACAGCAAAGGCCAACACGTACGGGCATTACCAACAACACTCTCATACAGCCAGTGTCTAATAAAACAATGAGATCATCACCGACCACGTCAACCGCCTCCAGCCTTAGTGGGGGCTCGCCTCAAAAAACTTCCTCTGTAAACATaagtaataatataaataatacaatGAATACAACGACGGCCGAAGAAGATCCCATGTTACCGGATTATTTGAATGGATTGAATTGTCGTAAATGCAATGAGGTATTTTTCTATCGCAATAAATTGTATGAACATTACAAACTGCATAGTGCCCAGGAGGAGGCGGAAAAGCAActccaaaaaaaggaaacaaaaacacCAAGTACTGTGAAACAAGTGCAGGAGCAAACCACAGGGAACTCTTTGGACTTACAACCCACAGAAACCCTTTTACCCATGCAGCAACATAATATCACAACAGAGCCACAAATACAGTTACAATATCAAGAGCCTAATCAGACGCCGCAAACACATCAGATTCAAGTATTACAACAATTGCCACAACAAGAAGAAGTTGTCATCACAACCACTCCCCTGGACAATTCCTTGACAACGAGCTTCAATAACGTTGTTGATCCCATGACATTGGTGTTAACACCAAATACCACATTAAGCAATGCCGTTGCTCCCCTAACACCATCCTCCAGTTCTACATATACCCTACCATCCGATGCAATACCACAAATTGTGGAAATGGAACAGACCATTGAAACCGATATGGATTTTGATTTTAACGGCGATGCTCTCTTTGAGGATTTTGATGATGTTGAAAATTCATCCGATGACAATGATATGCGTAATTTGGCTCTCACTTCCGATGATGATTTTGATGATGTCCTCAAGGAGCAGAGTGAAAGTCAAACGGAGACGGCCACATCCTATTGTGCCCAGTGTCAAAAATCATTTCTCAGCCAGTATCAATTTGAAAATCATATGTTTTTGCACAGAGGACTGGCTCCGTATCGTTGTGAAATGTGTACCAATCTCTATAACACTAAACGTGCTTTAATACGCCATTATCGGGCTGTCCATAAGAGAATACCCACAAGGGATATGATCCAGGCCAAGGGTGATAAAGTTTATGTTAGTGATaattcttctatggaaaatttgagtATTGAACAATCCAGCGTAACAACCTTTATGTGTGCTAAATGTACCTATGAATCCACAGACTTTCCCAGTGTGCAATTACACTTGAACACAAATCATAGCATTCACGATGattcttatatattaaaaaAACTTCCTTATGAATGTCCCCGCTGCATACGATCATATTCAACCAAAGCAAAATTGTTACGCCATTTGGAACGTAATCATTCAACGACACCAATTAATAATCcacaaattcaaattaattccaCAGAAACtgtaacaacaacgacaacaaccacAACCGCTCCGgtgttaaataataataacgttGATGCACCACTACCAGTGATgactaataacaataataataataatgagaaTGCATCAAGCGGTAAGGTATATGAAGAGGTCAATATTATtaatcccaatcccaacaaccacaacaacagtactattaataataataataacaataacaacaataatggtcTAATCCGAGATATGCCATCAATTGTAAATAACGATAGCAAAACATGGATTTCAAGTCGTCctacttttttgttgttaattttggtAGACCAATCAAGAGATATTGTTAATTGTATTATCTTTCCCAAAAAATGCTGccatattttattcaataaaataaataaaaaaggactTACGGATGAATGTAACAAAGAATCACAACTCTTTAGCATCGACCCAGCAGCACAATGTGACAAcggaacaaaaaacaacaatggaCTCCCCTTTGAAGACTGTGTTGTAACACCTTCCACCTCAACATCATTTGTTATGATTTGTCCAGATTTACAAGATGACCTTACAATTGGCACAGTTCCCACAACTGACACAACGGTTGATGCCACTAAAGACATGATATTCAATGCAACCGATATGTTAACAGAAAACACCGAACTGACCACAAATCCCACTTTGGAGACTGAGATTTCAACAaatacagatacaccaacaatgaatactgatacacgaacaataaacgcagataccccaGCATCCTCGGAAATACCAACTGGCGTTGCAAATGATAAAATACTATACAAATGTACGGCCTGCCATGAAAATTGTACCACAATCGAGGCCGTTAGAGTACATAGTCGTAAAGTGACATGCCGCGATTTTATCAAGTCCCAGAACAAAGATCAAACCTCGGGGCTATACAAATGTGAAGTGTGCGACATTAAATATCCCACCTTATATTTATTGCGGCATCATTTGAAGAAGCATATGGCACGAACATTTCGTTGTTCTTCCTGTCCCAAATCGTATCTAAGTAAATTAGAATTAGATATTCACCAAAGGACCCACACCGATGAGAGGCCACATCAGTGTGACAAATGTCCGAATAGTTTTCGTTATGCACATCATTTGAAGCGGCACAAGGATATCATACACTTTGGCAAACGTTACATGTGTCCCGAGGCCAATTGTAATCGGCAATTCACAACAATGGATCAATTGAAAGTACATAAATGGTCTCATTGTGGCATTGTGccgaacaaatgtaaatattgtgGACAATTGTTTAAGAAGCGTTTGTTTCTACGAAATCACTGCTCGAAAATCCACAACAAAGCACTAACAGATGATGAGGAGTTTAATGGCAACAGCATGGCCTGCAAAAGTCCCCAGGAGGATATTCTACAGCCAATTAACTGGGACTAA
- Protein Sequence
- MDDKKSIQDCKDYYSSVCRTCLQANGEMQNLSAPMNGGADRSTYLDCLNYCMPSYSGVTEETDALPLCICKDCASALQVAYWFMKNATKAQEVLKIRINEIKEKQKQLEREEAAQAKASEEVKKPKRYRCKICNTKLETKRSLKDHVKLHLDIIAYNCQLCGFEHHQRNHLIQHYQFTHGVEPTPEQLKPKTKITPPIKSSNSTSTRQTVNGSGQRQQFLQQPLSNSGEVYVDNHQPVATAQNSHEIIYTSAPQNQNIVYATAINTQTTTAPLEGNAATTTIFAQTNGEAFTFNSGFEGNLNMQNDTNVGNEFIVMADGSVENVMGKGVVIEYINAGDGTTLSLDNGLVLENILQVPNDGSTSNIIVSQDNGNTNNLALTQSDANATSMIISNNDMVQMDVDDIIVEDPENTPEQTQDVPISPIDEDMIPATFIEQPKRNICKICAKEFDTQDELKTHMLTHNEIPHFFCDHCSFYTFFKIDLNQHYKSKHNIQPTNKQLQPKNKPTTRCADAEMDPQTKNAIVEKIERFARSPKLVYSCDICFYECDLKYEIKRHYLAKHCMNVQDIQQRPTRTGITNNTLIQPVSNKTMRSSPTTSTASSLSGGSPQKTSSVNISNNINNTMNTTTAEEDPMLPDYLNGLNCRKCNEVFFYRNKLYEHYKLHSAQEEAEKQLQKKETKTPSTVKQVQEQTTGNSLDLQPTETLLPMQQHNITTEPQIQLQYQEPNQTPQTHQIQVLQQLPQQEEVVITTTPLDNSLTTSFNNVVDPMTLVLTPNTTLSNAVAPLTPSSSSTYTLPSDAIPQIVEMEQTIETDMDFDFNGDALFEDFDDVENSSDDNDMRNLALTSDDDFDDVLKEQSESQTETATSYCAQCQKSFLSQYQFENHMFLHRGLAPYRCEMCTNLYNTKRALIRHYRAVHKRIPTRDMIQAKGDKVYVSDNSSMENLSIEQSSVTTFMCAKCTYESTDFPSVQLHLNTNHSIHDDSYILKKLPYECPRCIRSYSTKAKLLRHLERNHSTTPINNPQIQINSTETVTTTTTTTTAPVLNNNNVDAPLPVMTNNNNNNNENASSGKVYEEVNIINPNPNNHNNSTINNNNNNNNNNGLIRDMPSIVNNDSKTWISSRPTFLLLILVDQSRDIVNCIIFPKKCCHILFNKINKKGLTDECNKESQLFSIDPAAQCDNGTKNNNGLPFEDCVVTPSTSTSFVMICPDLQDDLTIGTVPTTDTTVDATKDMIFNATDMLTENTELTTNPTLETEISTNTDTPTMNTDTRTINADTPASSEIPTGVANDKILYKCTACHENCTTIEAVRVHSRKVTCRDFIKSQNKDQTSGLYKCEVCDIKYPTLYLLRHHLKKHMARTFRCSSCPKSYLSKLELDIHQRTHTDERPHQCDKCPNSFRYAHHLKRHKDIIHFGKRYMCPEANCNRQFTTMDQLKVHKWSHCGIVPNKCKYCGQLFKKRLFLRNHCSKIHNKALTDDEEFNGNSMACKSPQEDILQPINWD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -