Basic Information

Insect: Musca domestica
Gene Symbol: -
Assembly: GCA_000371365.1
Location: Scaffold18775:12471-22346[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.15 7.7 6.9 0.1 5 23 596 615 590 615 0.90

2 14 0.0048 0.24 11.6 1.4 2 20 627 645 627 647 0.93

3 14 3.3 1.6e+02 2.7 0.3 5 23 719 737 716 737 0.92

4 14 1.1e-06 5.4e-05 23.1 1.9 1 23 743 766 743 766 0.96

5 14 0.00016 0.0079 16.3 1.3 2 23 774 795 773 795 0.96

6 14 0.3 15 6.0 4.7 1 23 846 870 846 870 0.92

7 14 0.00029 0.015 15.5 7.1 1 23 875 897 875 897 0.97

8 14 0.0019 0.096 12.9 0.4 1 23 946 969 946 969 0.96

9 14 0.00011 0.0054 16.8 6.0 2 23 975 997 974 997 0.97

10 14 7.3e-06 0.00036 20.5 0.6 2 23 1001 1023 1000 1023 0.93

11 14 0.00063 0.031 14.4 2.3 1 23 1029 1052 1029 1052 0.95

12 14 0.087 4.3 7.7 1.8 1 23 1057 1080 1057 1080 0.91

13 14 1.6e-06 7.8e-05 22.6 0.5 1 23 1086 1108 1086 1108 0.99

14 14 0.17 8.6 6.7 0.3 3 23 1120 1142 1116 1142 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.15	7.7	6.9	0.1	5	23	596	615	590	615	0.90
2	14	0.0048	0.24	11.6	1.4	2	20	627	645	627	647	0.93
3	14	3.3	1.6e+02	2.7	0.3	5	23	719	737	716	737	0.92
4	14	1.1e-06	5.4e-05	23.1	1.9	1	23	743	766	743	766	0.96
5	14	0.00016	0.0079	16.3	1.3	2	23	774	795	773	795	0.96
6	14	0.3	15	6.0	4.7	1	23	846	870	846	870	0.92
7	14	0.00029	0.015	15.5	7.1	1	23	875	897	875	897	0.97
8	14	0.0019	0.096	12.9	0.4	1	23	946	969	946	969	0.96
9	14	0.00011	0.0054	16.8	6.0	2	23	975	997	974	997	0.97
10	14	7.3e-06	0.00036	20.5	0.6	2	23	1001	1023	1000	1023	0.93
11	14	0.00063	0.031	14.4	2.3	1	23	1029	1052	1029	1052	0.95
12	14	0.087	4.3	7.7	1.8	1	23	1057	1080	1057	1080	0.91
13	14	1.6e-06	7.8e-05	22.6	0.5	1	23	1086	1108	1086	1108	0.99
14	14	0.17	8.6	6.7	0.3	3	23	1120	1142	1116	1142	0.92

Sequence Information

Coding Sequence: ATGTCGTCGGTTGGTGTTACAACAACTGCCAGCATTTGCTTATCTTGCAAGACCCAAGAGAAAACTACGGATTTTCACAACATTTTCGAAGCTGATTTGGAGGATATACAATTAAGTGATTTGATTCTAAAATACTTTGGAATCTCCATTTCCTCTGAGAAGGGCCACAAGCAGGAAATTTGCGATGAATGCCTGAATCGTTTAATAGAACTATATGATGTGGAAGAGCATAGCAAAGAGTTAAAGGCGGCTGCAAATGATGGAAATACAAAGAACAAAGAAGAGTTGACGGTGCCGATATGTTCAATCAAGGAGGAAAGAGAAAATGCGGATGCTAGCGGGAAAACTTCTAATAAAGAAAATGCTTACATTAAAGCTGAAACTAGGGAGTTACCACCCTCTTTTGTAGTTAATAAAGGACTCCAGGATGCAGATCAACAAGCAGCTGATATAGAAGGCAAATGTGATGAGGGACCAAAGGTAACAACCTTGCTCGAAACAGACATTAATaatggagaagaagaaaaagaacacTGCTATGTGGACAGTACACCATCTACGCGCACATTGGAAACTGATACCAAGGAGGTGGAAGATATTTACAACAATGTACATCAGTTACAGTCAACGGTGACCTTCGACGAAAATGTATATGAAGATAGTGATCAAACGGAATCTTTAGCTGAGGTCCTTGCttaccaaaataatgaagaacaTAAAGCCATAGATCATGAATCCgaagaaatttcagaattggCAACCAACTTTGAAACAGAATTGAGTAATGATGGGAGTTTCCACAATCTGGTTTCATCGGAATCGCATAGTGTTCTCCGTGTTAATGCAAAACCAATTAGCGAGGAAGATGACGTAGATTCTCACTTGCAACAACTTCCATCAGAGAATAATAACGGGTTCGAAGCCATAGAAGAGTCAAACGACATGGAAGAAAATGATGACTACAACGAGGAAACTTACGTCGAATCATCTCCAACTTCCGAACAGAACACTGTTGTTTTCAAAGCTAACACTAAATCGTCCGTTATTGAAGAGGACCCTGAATACCCAGACGATTCTGgcagtaattattttttagctGTTGACAATGATGAAAAACAGCAGGAAGCGGCGGAAATGATGGTTTATGAGGAACATAATACAGAAGATGAAGGATCCGATGCATATGTCgaagaaattttctgtcaaaacgATAaagatgagaattctggggaagaagaaaatcctggggttgatgaaaatacttgtgaagaagaaaGTGCTGTTGAAGACATAACTGATGATACCTTAATCTATGTACAAGATGATGCTGTGGAATTTGATGAGCCCGCTGCTGACTTGATAGAGTTGGAAAACGGAAATGATAATGAATCGACAAATGTTTATGAAGAGGATCAACAAAGTGAATTTGAAGATCAAACATTGGAAATCCAGGCAACTGATGAAATCTCTAATGACAATAATGTGGACACCACAGATTTCGTTGAAAATGAAGAGTATTCTTTGGATGCTACTGAATCAAATGAAAACATTCAGGATGAGAATTACTATGTTGAAGAAATTATTACCTCTGTAGATTACGACAAAGTTGATATAACTGAGTATCTGGATAACGTCATTGCTACGAACTTCGATGACCTGCAAGTAGAATGGGAAGTGGAGTGTAAACTATGCCTCTGTAAATATGCCACATTTCAAGAGCTACTACAACATTCATGTATCACTGAGCTAGTGGAGGAAGAACAAAATTTCAGTTGTATTAAAGCTGATTGTAATGAAGTTGTGAGTAATTTGAAAACACTGGCACGACATTTGATCATTAgacattacaaaaatattgaaagTTTACGAATCTATGGCCGTTGTCCAGATTGCCGGAAACCGTTCTCAAATATAGCCGACTTTAATAAACATTCCTGCAGTGACATTAAAAGAAAGCCGGGCATGAAGAACTTTTGTCAGATGTGTAATCTACATTTTCAATCGTTGAAAAGATTTGTTTTCCACATGCAATTCCACTTGAGCAAACATCGTCCCAAAGTTTGTGTGCTTTGCAGTTCCCTTTTCAATAACATTGATGATTTCTTTGAACATGTTAGTTATGGTCATGAAACGGAAGCATCTATGGCTTGTATAAAATGTGATCGCTTCTTCCAAGATAAAGATGTTTTTGGACAGCATGTCCTGAGTcatgaaaacaaatatatttttgaatgtcCTCACTGTCCCAAGAAGTATACAAATAGAAGTAGTTTGACTAGTCATATGgatATTTATCACAATCATCAAATGAAACCCTTACAATGTGATCATTGCTATAAGATATTTGTTAATCAAGCCAGTTATCGCAGTCACATTAAGGCTCATATGCCAGAAGCGAAAATTACATCGTTTATATGTTTGGCTTGTGGTGTATTGTCAAATAATGAGGAATTTATACAGAATCACATTGAAAACGAAGAAACCTCACCGGTCGATACGGGCGGTGAATATATCGAAAAGATAATCTCTATTGCCTACACCTGCGAATGTTGTTCATTGGACtttttttCGCCGAAGCATTTACAAAAACATCGCAACACGCCAAGCCATGACGATAATCTCTATTGCTGTCCGATATGTCGCAAAACGTTCAAGACCCTAAAACATATGCGTAATCATATGACCAATCATAAAGATTATGATGAATGGCTTAATGACTTTCCAATTGCAAGATTTTATATGTGTAATATTGGGGATTGTATGGATGCCTATCCCTTGTGGTCATCGTTGTATTATCACAAGAAAAGGCATAAGACTACAGATGCACCCAGTAAGTTTCCGTGTCAATTTTGTGAGAAGGTGTGCGAAACAAAAATGTCCTTGGCCGTACACATTGCAAGGGTTCACAATAATAACAACATCAAATGCCAACATTGCCAAAAATCCTACAAAAGTGAAAAGGACTTAAAGCACCACATGATGCGCATGCATATTACCGTGCAATGCAGCAAATGCgataaagtatttaaaaatcaacgtaaTTTGATATCACACGAACAGCTAGTCCATGAAAATATGAAGCGTTACTTTTGCAGTCATTGTGAAAAGGGCTACTACTATCAGAGTGAACTGAAAGCTCATGAGAAAAATgTTCATCCAAGCACCACCTATAAATGCAAACTATGTAATTTTGTTACGACCTATCCAAAATCTTTGGATTTGCATCATGCAGCTAAACACACTGACAGTCTTCAGTTTCAATGTGAACTTTGTGGCAAGGGATTTGCACGCAAACAACTACTGGTCTTGCACATGAAACGGCACAAAGATGACAAGGATTTTATTTGCTATGAAAATTGTGATGATGGCTGTGCGGCAtcgtttattaattattttctattgaaaaaacacATTGAAGAGGAGCATTCATCGGCGACATGGACAGAGGATAGTGGCaaaaaatctaggttccaagaaaagaaaaaacgaaaagcCACTGAGACCAGTAGCAGCAGCTGCAGTGGAGGAAGCAAACGCAAGAAACGGGAAATAGTTGTGGTGGAAAATAACAGCGGTGAGGTAGAGTTTATTTTGGGCGAACTTGTTAATAACGAAAGCCAGGATGCTATGTCGAATGATCTGGAAAGCCAGGATGATGATAATAGAACACCCGACGAAGAAGAACAAGACGATGAAGAGGAAATACTTAAGGCCTTCGAAGAAGAGGATTTAATGGATTATGAAGCGAATGAGTGA
Protein Sequence: MSSVGVTTTASICLSCKTQEKTTDFHNIFEADLEDIQLSDLILKYFGISISSEKGHKQEICDECLNRLIELYDVEEHSKELKAAANDGNTKNKEELTVPICSIKEERENADASGKTSNKENAYIKAETRELPPSFVVNKGLQDADQQAADIEGKCDEGPKVTTLLETDINNGEEEKEHCYVDSTPSTRTLETDTKEVEDIYNNVHQLQSTVTFDENVYEDSDQTESLAEVLAYQNNEEHKAIDHESEEISELATNFETELSNDGSFHNLVSSESHSVLRVNAKPISEEDDVDSHLQQLPSENNNGFEAIEESNDMEENDDYNEETYVESSPTSEQNTVVFKANTKSSVIEEDPEYPDDSGSNYFLAVDNDEKQQEAAEMMVYEEHNTEDEGSDAYVEEIFCQNDKDENSGEEENPGVDENTCEEESAVEDITDDTLIYVQDDAVEFDEPAADLIELENGNDNESTNVYEEDQQSEFEDQTLEIQATDEISNDNNVDTTDFVENEEYSLDATESNENIQDENYYVEEIITSVDYDKVDITEYLDNVIATNFDDLQVEWEVECKLCLCKYATFQELLQHSCITELVEEEQNFSCIKADCNEVVSNLKTLARHLIIRHYKNIESLRIYGRCPDCRKPFSNIADFNKHSCSDIKRKPGMKNFCQMCNLHFQSLKRFVFHMQFHLSKHRPKVCVLCSSLFNNIDDFFEHVSYGHETEASMACIKCDRFFQDKDVFGQHVLSHENKYIFECPHCPKKYTNRSSLTSHMDIYHNHQMKPLQCDHCYKIFVNQASYRSHIKAHMPEAKITSFICLACGVLSNNEEFIQNHIENEETSPVDTGGEYIEKIISIAYTCECCSLDFFSPKHLQKHRNTPSHDDNLYCCPICRKTFKTLKHMRNHMTNHKDYDEWLNDFPIARFYMCNIGDCMDAYPLWSSLYYHKKRHKTTDAPSKFPCQFCEKVCETKMSLAVHIARVHNNNNIKCQHCQKSYKSEKDLKHHMMRMHITVQCSKCDKVFKNQRNLISHEQLVHENMKRYFCSHCEKGYYYQSELKAHEKNVHPSTTYKCKLCNFVTTYPKSLDLHHAAKHTDSLQFQCELCGKGFARKQLLVLHMKRHKDDKDFICYENCDDGCAASFINYFLLKKHIEEEHSSATWTEDSGKKSRFQEKKKRKATETSSSSCSGGSKRKKREIVVVENNSGEVEFILGELVNNESQDAMSNDLESQDDDNRTPDEEEQDDEEEILKAFEEEDLMDYEANE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -