Basic Information

Insect: Musca domestica
Gene Symbol: -
Assembly: GCA_000371365.1
Location: Scaffold19649:41853-59914[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.5e-07 4.7e-05 23.3 2.9 1 23 485 507 485 507 0.98

2 16 3.3e-06 0.00017 21.6 5.8 1 23 513 535 513 535 0.97

3 16 0.0052 0.26 11.5 3.7 1 23 541 563 541 563 0.98

4 16 0.00022 0.011 15.8 1.2 1 23 569 592 569 592 0.97

5 16 0.0025 0.12 12.5 3.5 1 23 605 627 605 627 0.94

6 16 0.0046 0.23 11.7 4.8 1 23 669 691 669 691 0.98

7 16 1.1 56 4.2 0.0 2 23 714 736 713 736 0.83

8 16 0.00029 0.014 15.5 0.4 1 23 1018 1040 1018 1040 0.98

9 16 0.78 39 4.7 0.4 1 23 1045 1067 1045 1067 0.95

10 16 0.053 2.6 8.4 1.2 1 23 1073 1096 1073 1096 0.92

11 16 9.5e-05 0.0047 17.0 1.1 1 23 1102 1125 1102 1125 0.93

12 16 0.0034 0.17 12.1 2.2 2 21 1133 1152 1132 1153 0.92

13 16 1.3e-05 0.00066 19.7 1.5 1 23 1219 1241 1219 1241 0.98

14 16 0.032 1.6 9.0 3.7 1 23 1247 1269 1247 1269 0.97

15 16 0.00015 0.0072 16.4 2.1 2 23 1277 1299 1276 1299 0.97

16 16 0.00026 0.013 15.6 0.3 1 23 1305 1328 1305 1328 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.5e-07	4.7e-05	23.3	2.9	1	23	485	507	485	507	0.98
2	16	3.3e-06	0.00017	21.6	5.8	1	23	513	535	513	535	0.97
3	16	0.0052	0.26	11.5	3.7	1	23	541	563	541	563	0.98
4	16	0.00022	0.011	15.8	1.2	1	23	569	592	569	592	0.97
5	16	0.0025	0.12	12.5	3.5	1	23	605	627	605	627	0.94
6	16	0.0046	0.23	11.7	4.8	1	23	669	691	669	691	0.98
7	16	1.1	56	4.2	0.0	2	23	714	736	713	736	0.83
8	16	0.00029	0.014	15.5	0.4	1	23	1018	1040	1018	1040	0.98
9	16	0.78	39	4.7	0.4	1	23	1045	1067	1045	1067	0.95
10	16	0.053	2.6	8.4	1.2	1	23	1073	1096	1073	1096	0.92
11	16	9.5e-05	0.0047	17.0	1.1	1	23	1102	1125	1102	1125	0.93
12	16	0.0034	0.17	12.1	2.2	2	21	1133	1152	1132	1153	0.92
13	16	1.3e-05	0.00066	19.7	1.5	1	23	1219	1241	1219	1241	0.98
14	16	0.032	1.6	9.0	3.7	1	23	1247	1269	1247	1269	0.97
15	16	0.00015	0.0072	16.4	2.1	2	23	1277	1299	1276	1299	0.97
16	16	0.00026	0.013	15.6	0.3	1	23	1305	1328	1305	1328	0.96

Sequence Information

Coding Sequence: ATGAATTGTTTGTTTAACATCAACGTTTGTCGTGTTTGCATGCAAAATGAAAAAGGAGCCGATTTATTAAGTAATAAAGATTTGCTGGAGAAGTTTTCATATGCAACGCATCTAACggtCAGCGAAAATGATAATTTACCCAAAATAATATGCAATAAATGTATTGCCCGCCTAAAAGTATCCCATTCATTTATAAAACAGGCTCACGAttctgaaaataacttaaagaCATTTCTGGCCAAAATCAACAATGAATTTCAAGAGGTTACAAAGGCAAAGAATGCCGACACTTCCTCCAGCAATTACGAGGATAACGATGAACAAATGTTAACAGAAGAAGAAATTCTAGAGCATATAAATCAATATGATAATGATACTGGTAAAACGGAAAAATCTACTACGTCCACAACAAAATCGAAAGATCATTCCAAACAAACGATTTCTAACAGAAGAAAAGGAACATCAGCTGAGAAACATCAAAATGATAAGCAAACAAGTGTTAGCTTGGATACTAAAGCCCTTGCGGactccaaaaaatatgaaaaagagaaagaattgaaaaaatcaattttacttCCCGCACAATCAAAATCGTCATTTAGTTTCAACAACCATGAAGAAACTGCATCAACCTTAAAGctggataatattaaaaatgatacGCAAATATTGGATAATGATGATGTGGAggaacatgaaatccacatattggagccagaaacccacatatcagagcatgaaaccTCAATTTCGGAGGAAAATGAAGAGGAACAAATGGAAGAAAATTTGTTGACGACTCTGCATGagcaaataaacaacaattcaGAAGATGAATCTCATGTAATCAATGCACCCGATATTGATAATGCATTGGATGAACTTAATGGGCAAGAGGAACATAATTTTTCCGATGCTGATATAAATGATGAAAATGTCCCACCTGAAGACACAGAGGAAGAAAATCagcaaaattttacaattaatgACGAAAGTTCATCGATAGAATTTAGTGTATTGGGAATAGAAGAAACACATAACCCGCAAACAATTCAACAAAATATCAATGCAGAAGAGGACAATGAAGAGGCTGCTGCTGATGAATATTTAGGACAGTATAAGACAATGCTTGACAATCAAGATGCCGAATTGCGGTACAATACAGATGAACACTACACTGAAGAAAATTCTGTTgagaattcaaaaattaatgaaaatataaattacacAAGTAAAACTCATCCAGATCAAAGCAATGAAATAACCGAATTTAATAACAGCGATAATGTTGATATGAAACACAATGTCATAAATGATGCAGATGGTGATCATAATCATGACAATTCCGATATGTACGCCAACTATATGGATGTTGATTATGATCGAGTTACGGCAACATCATCTTCGATAGGAAAGGTCAAAACAACTACAACCattcagcgaaaagtccaccgtTTCTATTGTCAACAATGTGATCGTGATTTTAGTACAAAAACAAATCTCAATCGTCATATGCAATCGCATGAGGGCAAGAAACCCCATGTCTGCCCacattgttcgaaaagttttaCACAAAAATCCACACTGAAACAACATATTTTTACTCATACCGGCGAGAAACCATATATATGTGAATATTGTGATCGTGGATTTACCCAATGTAAAAGTCTAATATTCCACACGAGACGACATACCGGATATAAACCGTTTCAATGTGAATTTTGTTTGATGACGTTCCGTCAGAAGGATGCTTTGAGGTTGCACATCTTAAAATATCACGTTCTCGTTGAACAAACAGCTGATGGCACTGAAACACATACCTGTATCATTTGCCAAAAGAAATTCTTTTCCAAAGATGATTTTAAAATACACATGAAAATTCATACCGTAACGGAAaccgaaaatatgtatgaacGGATGATTGTGCAGCATGACGAGGAGTATATCAATGCCACGGTGACCGATACCTCAGCATCGTCGGCGTCTGAACCAGGAAAAGCGAAAAAGTTCCAGTGCCGTagttgttttaaatgttttgctttAAAaaaaagtctATTGCGCCACATGACCATCCACAGTGAATTTGTTGATAATTTGGAAGTCTACAACGAAGAAGATTTATCATCTGACCACCATCAGTTTGCATGCTCTGCATGTcctgatttaatttttaaatcaattgaaGATTTAAAAGTGCACATGCTTGAACATGATATAAAACAAGaagcGCAAAAAATGGCATTGGAATTGTGTCGTTTGTGTGGAAATAATCAGAATCTCATAAGGATCTTGGATAGGGGAcccgaaatgttggaaaaactAAAGAAGTGTGCTAACATTGAAATTAAATCTGATGATATTCTGCCAAAGTTGATATGCCTGCAATGTGATAACACTTTGGAAATGTCCATGCTGTTGAGGAAACAAAGCGAAGAAATGCAAGAGCGTCTGAAGGGCGAACTACAAAAGACACAGTCAGTGGCGTTGAGCAGAAAAATTGTGGACAAACATCAGAACGAAGATGTGCAATATATTTCCGATGATGAACCCACGCTGGATATAAAAGTGAAGGTATCCGATGAAAGTGAGGCAATTCTGCCCATAGAGGTTGATGTTGAGGTCTTGGATACACGCAGCGAATCAACAATTGTGGCTTCAGAAACTGAAGATGCAGTTGATTATGActttcatataccctccattacaATAGGCGACAGGCTACATGCTGGAAAACAAATTTTGCCTCCACCACCCCATCTGCGATCCAAAAGTGTGTCAGTAGATGATATTGAATCCAGCGAAAGCTATAATTCATTAAACAGAAAAGTCAGCATACAAAGCTATGAGGATGACGATAATGATGAAGATAATCATAAACCCGAGTATGATATAATCGAAGTTACCAAAAATGAGTTCCATAACTCTGATTCCTGTTCAAGTCTTTTGCAACCCCAAGAATCGTTCAGTATAGATGCGATGTCGATTAATTCGAACAATGAACCCTTACAGACATCTGATGGTGATTATGTACCACCGTCACGCGGTTCGACAGTCTACACCTGTGTTACCTGCAATGAAGTGTTCACACGCAAAAAAGCCTATGCAGAACATATTCTACAGCATGGAACCAATCGTTATCAGTGTATACAATGTTTGGCAGAGTTCCCAACACGTTATCGTTTGATACGACACGAAACCACTCACACCGAAGGTCAAACGTATAAATGTCTTCTCTGTAGTCGCGAGTATCGTGCTGGTTATAATCTCCAGAGGCATATCGTGGCATGTCACTCGGAAAAGAATCAATTTGAGTGTAATATCTGCCACTTGAGTTTTGCTCGTCAGGATGTTTTAAAGCGTCACCGAGATCAAATTCATTTGAACATCAACAAGAAATGGCACTGTAAAAAGTGCGGTAAAAGCTTTCGTGCCCAATATCTGTTCAACTctcacaaaaatcaaaatacctgCTCACCCGAGCCCTTaccgaagaaaaaaattgctaaagGCAAAAAACATTCTCGTTCGGGTAAAGCCGAAGACGAATACATTGAACAGTGTCCGGATGACAAATATAAATGCATAATAtgtaatatgaaatttaaatgtaTATGGAATTGTAGAAACCACATCCAGACACACAGCGATACCAAACCATATCCCTGTAGTACATGTCCGAAACATTTTCGTACCCGATACGCTCTCATCAACCATGAACGTATTCATAGTAATGAAAAACCATTCGTTTGTGATATCTGCATGAAACCTTTTCGCCAAGTAACACATATGCGACATCATCGTATGCTTCATACGCGTGATAATCTGCCGGTCAAGTGTAAAGAGTGTCATCAAGGATTTGTGACAAAATGGAAGTTGAGGGAACATTTGCGTCGGGAACATTGTACGGTCAAGGCATTTAAATGTGCCGAATGTCCGGAGGAGTTCTATttgaaatatgatttaaaaCGACATGCTCGTTTGGTGCATTTGAGATCGGTGGAAATCGCCGAATCGGATAATGAGGGTGTAAAGAATGATACCTACGTACCGGATGGGACTTCTGATTCTGAAATATATCAATATATTCAAACTGAAGAGGATAATGATGATCATTATGCGGATATTGACACGTTATTTAATGCAACGGATAGTAATGTCACAAATGTCGATACAAATCAGCGGAATCATACTGCGAATGTGGTGGGTGAAGGAGCACCCTATAATCCTATCAATTTTATAAATGACAACGAAGTCGCTGATGTTGTTGAAAATACAGTTTTAATTGTCCCAGAGGCAAACTCGAATCCGGAACAagatacaacaacaaatttatatGCCCCAGAAATAGAGCATCATACAACTATCAATTTCATAAATGATCATGATATTATTGATATAGATGAGGTTCAAGAGAACAATGTTCACGATGTTGATGACGATGTACAAATAATTGAAGATTCCATAACACAGACGTCTCAAAATCCCCCACATCTGGATGGGGAAATAAATGCACCCGATTCTCCTTTATTTATATTGAATGATCTAGAATCGCCACCACCCTCACCACAAACATCAAACCAAACACTGCAACAAGAAAGCGAAAATCAGGTGATAAATAATGTGTCGTATATGGATTGCATACAATTGGATTCATCGAATTCTTGTAAATCGCCACCGGACGAAATTGTGGACAACGATTTCATTGAGGAGGAAATTCATATAACCGAAGAAACATACACCACAAGTACAAGATATTTCAATAGCAACGATGTTGTACAGCAGCAGTCATAA
Protein Sequence: MNCLFNINVCRVCMQNEKGADLLSNKDLLEKFSYATHLTVSENDNLPKIICNKCIARLKVSHSFIKQAHDSENNLKTFLAKINNEFQEVTKAKNADTSSSNYEDNDEQMLTEEEILEHINQYDNDTGKTEKSTTSTTKSKDHSKQTISNRRKGTSAEKHQNDKQTSVSLDTKALADSKKYEKEKELKKSILLPAQSKSSFSFNNHEETASTLKLDNIKNDTQILDNDDVEEHEIHILEPETHISEHETSISEENEEEQMEENLLTTLHEQINNNSEDESHVINAPDIDNALDELNGQEEHNFSDADINDENVPPEDTEEENQQNFTINDESSSIEFSVLGIEETHNPQTIQQNINAEEDNEEAAADEYLGQYKTMLDNQDAELRYNTDEHYTEENSVENSKINENINYTSKTHPDQSNEITEFNNSDNVDMKHNVINDADGDHNHDNSDMYANYMDVDYDRVTATSSSIGKVKTTTTIQRKVHRFYCQQCDRDFSTKTNLNRHMQSHEGKKPHVCPHCSKSFTQKSTLKQHIFTHTGEKPYICEYCDRGFTQCKSLIFHTRRHTGYKPFQCEFCLMTFRQKDALRLHILKYHVLVEQTADGTETHTCIICQKKFFSKDDFKIHMKIHTVTETENMYERMIVQHDEEYINATVTDTSASSASEPGKAKKFQCRSCFKCFALKKSLLRHMTIHSEFVDNLEVYNEEDLSSDHHQFACSACPDLIFKSIEDLKVHMLEHDIKQEAQKMALELCRLCGNNQNLIRILDRGPEMLEKLKKCANIEIKSDDILPKLICLQCDNTLEMSMLLRKQSEEMQERLKGELQKTQSVALSRKIVDKHQNEDVQYISDDEPTLDIKVKVSDESEAILPIEVDVEVLDTRSESTIVASETEDAVDYDFHIPSITIGDRLHAGKQILPPPPHLRSKSVSVDDIESSESYNSLNRKVSIQSYEDDDNDEDNHKPEYDIIEVTKNEFHNSDSCSSLLQPQESFSIDAMSINSNNEPLQTSDGDYVPPSRGSTVYTCVTCNEVFTRKKAYAEHILQHGTNRYQCIQCLAEFPTRYRLIRHETTHTEGQTYKCLLCSREYRAGYNLQRHIVACHSEKNQFECNICHLSFARQDVLKRHRDQIHLNINKKWHCKKCGKSFRAQYLFNSHKNQNTCSPEPLPKKKIAKGKKHSRSGKAEDEYIEQCPDDKYKCIICNMKFKCIWNCRNHIQTHSDTKPYPCSTCPKHFRTRYALINHERIHSNEKPFVCDICMKPFRQVTHMRHHRMLHTRDNLPVKCKECHQGFVTKWKLREHLRREHCTVKAFKCAECPEEFYLKYDLKRHARLVHLRSVEIAESDNEGVKNDTYVPDGTSDSEIYQYIQTEEDNDDHYADIDTLFNATDSNVTNVDTNQRNHTANVVGEGAPYNPINFINDNEVADVVENTVLIVPEANSNPEQDTTTNLYAPEIEHHTTINFINDHDIIDIDEVQENNVHDVDDDVQIIEDSITQTSQNPPHLDGEINAPDSPLFILNDLESPPPSPQTSNQTLQQESENQVINNVSYMDCIQLDSSNSCKSPPDEIVDNDFIEEEIHITEETYTTSTRYFNSNDVVQQQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -